Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02182

Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02180 and MPMX20_02181 are separated by 2 nucleotidesMPMX20_02181 and MPMX20_02182 are separated by 4 nucleotidesMPMX20_02182 and MPMX20_02183 are separated by 99 nucleotides MPMX20_02180: MPMX20_02180 - hypothetical protein, at 2,269,921 to 2,270,448 _02180 MPMX20_02181: MPMX20_02181 - hypothetical protein, at 2,270,451 to 2,270,921 _02181 MPMX20_02182: MPMX20_02182 - hypothetical protein, at 2,270,926 to 2,271,360 _02182 MPMX20_02183: MPMX20_02183 - HTH-type transcriptional regulator DmlR, at 2,271,460 to 2,272,392 _02183 Position (kb) 2270 2271 2272Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2269.969 kb on + strandat 2269.976 kb on + strand, within MPMX20_02180at 2269.976 kb on + strand, within MPMX20_02180at 2269.976 kb on + strand, within MPMX20_02180at 2269.976 kb on + strand, within MPMX20_02180at 2269.984 kb on - strand, within MPMX20_02180at 2269.984 kb on - strand, within MPMX20_02180at 2269.984 kb on - strand, within MPMX20_02180at 2270.001 kb on + strand, within MPMX20_02180at 2270.118 kb on + strand, within MPMX20_02180at 2270.223 kb on + strand, within MPMX20_02180at 2270.245 kb on - strand, within MPMX20_02180at 2270.255 kb on - strand, within MPMX20_02180at 2270.286 kb on + strand, within MPMX20_02180at 2270.301 kb on + strand, within MPMX20_02180at 2270.302 kb on - strand, within MPMX20_02180at 2270.309 kb on - strand, within MPMX20_02180at 2270.359 kb on + strand, within MPMX20_02180at 2270.480 kb on + strandat 2270.488 kb on - strandat 2270.574 kb on - strand, within MPMX20_02181at 2270.587 kb on - strand, within MPMX20_02181at 2270.683 kb on + strand, within MPMX20_02181at 2270.750 kb on + strand, within MPMX20_02181at 2270.750 kb on + strand, within MPMX20_02181at 2270.758 kb on - strand, within MPMX20_02181at 2270.802 kb on - strand, within MPMX20_02181at 2270.838 kb on + strand, within MPMX20_02181at 2270.839 kb on + strand, within MPMX20_02181at 2270.872 kb on - strand, within MPMX20_02181at 2270.884 kb on + strandat 2270.939 kb on + strandat 2270.947 kb on - strandat 2271.049 kb on + strand, within MPMX20_02182at 2271.049 kb on + strand, within MPMX20_02182at 2271.049 kb on + strand, within MPMX20_02182at 2271.057 kb on - strand, within MPMX20_02182at 2271.081 kb on + strand, within MPMX20_02182at 2271.213 kb on + strand, within MPMX20_02182at 2271.283 kb on - strand, within MPMX20_02182at 2271.300 kb on - strand, within MPMX20_02182at 2271.393 kb on + strandat 2271.398 kb on + strandat 2271.401 kb on - strandat 2271.401 kb on - strandat 2271.555 kb on + strand, within MPMX20_02183at 2271.591 kb on + strand, within MPMX20_02183at 2271.597 kb on + strand, within MPMX20_02183at 2271.698 kb on + strand, within MPMX20_02183at 2271.698 kb on + strand, within MPMX20_02183at 2271.706 kb on - strand, within MPMX20_02183at 2271.781 kb on + strand, within MPMX20_02183at 2271.784 kb on - strand, within MPMX20_02183at 2271.784 kb on - strand, within MPMX20_02183at 2271.784 kb on - strand, within MPMX20_02183at 2271.784 kb on - strand, within MPMX20_02183at 2271.784 kb on - strand, within MPMX20_02183at 2271.804 kb on - strand, within MPMX20_02183at 2271.804 kb on - strand, within MPMX20_02183at 2271.847 kb on - strand, within MPMX20_02183at 2271.965 kb on - strand, within MPMX20_02183at 2272.107 kb on - strand, within MPMX20_02183at 2272.155 kb on + strand, within MPMX20_02183at 2272.178 kb on - strand, within MPMX20_02183at 2272.226 kb on + strand, within MPMX20_02183at 2272.234 kb on - strand, within MPMX20_02183at 2272.234 kb on - strand, within MPMX20_02183at 2272.236 kb on + strand, within MPMX20_02183at 2272.252 kb on + strand, within MPMX20_02183at 2272.260 kb on - strand, within MPMX20_02183at 2272.287 kb on - strand, within MPMX20_02183

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,269,969 + -0.7
2,269,976 + MPMX20_02180 0.10 +0.0
2,269,976 + MPMX20_02180 0.10 -0.1
2,269,976 + MPMX20_02180 0.10 -0.8
2,269,976 + MPMX20_02180 0.10 -0.7
2,269,984 - MPMX20_02180 0.12 -0.9
2,269,984 - MPMX20_02180 0.12 -1.1
2,269,984 - MPMX20_02180 0.12 -3.1
2,270,001 + MPMX20_02180 0.15 -0.1
2,270,118 + MPMX20_02180 0.37 +0.9
2,270,223 + MPMX20_02180 0.57 -1.1
2,270,245 - MPMX20_02180 0.61 -0.4
2,270,255 - MPMX20_02180 0.63 +0.6
2,270,286 + MPMX20_02180 0.69 +1.5
2,270,301 + MPMX20_02180 0.72 -1.5
2,270,302 - MPMX20_02180 0.72 -0.0
2,270,309 - MPMX20_02180 0.73 -0.8
2,270,359 + MPMX20_02180 0.83 +0.2
2,270,480 + -0.2
2,270,488 - +0.0
2,270,574 - MPMX20_02181 0.26 +1.2
2,270,587 - MPMX20_02181 0.29 +0.1
2,270,683 + MPMX20_02181 0.49 +0.9
2,270,750 + MPMX20_02181 0.63 -2.7
2,270,750 + MPMX20_02181 0.63 -0.8
2,270,758 - MPMX20_02181 0.65 -0.2
2,270,802 - MPMX20_02181 0.75 -2.6
2,270,838 + MPMX20_02181 0.82 -0.5
2,270,839 + MPMX20_02181 0.82 -0.7
2,270,872 - MPMX20_02181 0.89 -1.1
2,270,884 + -1.0
2,270,939 + -0.4
2,270,947 - -1.2
2,271,049 + MPMX20_02182 0.28 -0.7
2,271,049 + MPMX20_02182 0.28 -1.4
2,271,049 + MPMX20_02182 0.28 -0.2
2,271,057 - MPMX20_02182 0.30 +0.0
2,271,081 + MPMX20_02182 0.36 -0.4
2,271,213 + MPMX20_02182 0.66 -1.3
2,271,283 - MPMX20_02182 0.82 +3.5
2,271,300 - MPMX20_02182 0.86 -1.1
2,271,393 + -0.5
2,271,398 + -2.4
2,271,401 - -1.0
2,271,401 - +0.8
2,271,555 + MPMX20_02183 0.10 -2.2
2,271,591 + MPMX20_02183 0.14 -0.4
2,271,597 + MPMX20_02183 0.15 -0.4
2,271,698 + MPMX20_02183 0.26 -0.9
2,271,698 + MPMX20_02183 0.26 -0.1
2,271,706 - MPMX20_02183 0.26 -0.7
2,271,781 + MPMX20_02183 0.34 +1.6
2,271,784 - MPMX20_02183 0.35 -0.3
2,271,784 - MPMX20_02183 0.35 -0.3
2,271,784 - MPMX20_02183 0.35 -0.0
2,271,784 - MPMX20_02183 0.35 -0.7
2,271,784 - MPMX20_02183 0.35 +0.2
2,271,804 - MPMX20_02183 0.37 -0.9
2,271,804 - MPMX20_02183 0.37 -1.7
2,271,847 - MPMX20_02183 0.41 -1.2
2,271,965 - MPMX20_02183 0.54 -0.3
2,272,107 - MPMX20_02183 0.69 -0.7
2,272,155 + MPMX20_02183 0.74 -2.5
2,272,178 - MPMX20_02183 0.77 +0.8
2,272,226 + MPMX20_02183 0.82 +0.5
2,272,234 - MPMX20_02183 0.83 -1.4
2,272,234 - MPMX20_02183 0.83 +1.8
2,272,236 + MPMX20_02183 0.83 -0.7
2,272,252 + MPMX20_02183 0.85 -0.8
2,272,260 - MPMX20_02183 0.86 -1.9
2,272,287 - MPMX20_02183 0.89 -0.4

Or see this region's nucleotide sequence