Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01965 and MPMX20_01966 are separated by 89 nucleotides MPMX20_01966 and MPMX20_01967 are separated by 35 nucleotides MPMX20_01967 and MPMX20_01968 are separated by 125 nucleotides MPMX20_01968 and MPMX20_01969 are separated by 72 nucleotides MPMX20_01969 and MPMX20_01970 are separated by 28 nucleotides
MPMX20_01965: MPMX20_01965 - Response regulator protein TmoT, at 2,058,926 to 2,059,537
_01965
MPMX20_01966: MPMX20_01966 - hypothetical protein, at 2,059,627 to 2,060,106
_01966
MPMX20_01967: MPMX20_01967 - hypothetical protein, at 2,060,142 to 2,060,282
_01967
MPMX20_01968: MPMX20_01968 - hypothetical protein, at 2,060,408 to 2,061,190
_01968
MPMX20_01969: MPMX20_01969 - Carbonic anhydrase 1, at 2,061,263 to 2,061,898
_01969
MPMX20_01970: MPMX20_01970 - hypothetical protein, at 2,061,927 to 2,063,522
_01970
Position (kb)
2060
2061
2062 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2059.476 kb on + strand at 2059.491 kb on + strand at 2059.491 kb on + strand at 2059.499 kb on - strand at 2059.587 kb on + strand at 2059.610 kb on - strand at 2059.620 kb on - strand at 2059.675 kb on - strand, within MPMX20_01966 at 2059.675 kb on - strand, within MPMX20_01966 at 2059.681 kb on + strand, within MPMX20_01966 at 2059.686 kb on + strand, within MPMX20_01966 at 2059.694 kb on - strand, within MPMX20_01966 at 2059.723 kb on - strand, within MPMX20_01966 at 2059.725 kb on + strand, within MPMX20_01966 at 2059.725 kb on + strand, within MPMX20_01966 at 2059.728 kb on - strand, within MPMX20_01966 at 2059.733 kb on - strand, within MPMX20_01966 at 2059.743 kb on - strand, within MPMX20_01966 at 2059.750 kb on + strand, within MPMX20_01966 at 2059.753 kb on - strand, within MPMX20_01966 at 2059.790 kb on + strand, within MPMX20_01966 at 2059.812 kb on + strand, within MPMX20_01966 at 2059.820 kb on - strand, within MPMX20_01966 at 2059.820 kb on - strand, within MPMX20_01966 at 2059.820 kb on - strand, within MPMX20_01966 at 2059.861 kb on - strand, within MPMX20_01966 at 2059.863 kb on - strand, within MPMX20_01966 at 2059.888 kb on - strand, within MPMX20_01966 at 2059.914 kb on + strand, within MPMX20_01966 at 2059.922 kb on - strand, within MPMX20_01966 at 2059.932 kb on + strand, within MPMX20_01966 at 2059.932 kb on + strand, within MPMX20_01966 at 2059.981 kb on - strand, within MPMX20_01966 at 2059.997 kb on + strand, within MPMX20_01966 at 2060.154 kb on + strand at 2060.161 kb on + strand, within MPMX20_01967 at 2060.189 kb on - strand, within MPMX20_01967 at 2060.229 kb on - strand, within MPMX20_01967 at 2060.244 kb on - strand, within MPMX20_01967 at 2060.270 kb on - strand at 2060.315 kb on + strand at 2060.315 kb on + strand at 2060.320 kb on + strand at 2060.328 kb on - strand at 2060.345 kb on + strand at 2060.348 kb on - strand at 2060.348 kb on - strand at 2060.355 kb on + strand at 2060.379 kb on + strand at 2060.382 kb on - strand at 2060.394 kb on + strand at 2060.409 kb on + strand at 2060.409 kb on + strand at 2060.409 kb on + strand at 2060.409 kb on + strand at 2060.417 kb on - strand at 2060.417 kb on - strand at 2060.417 kb on - strand at 2060.417 kb on - strand at 2060.417 kb on - strand at 2060.417 kb on - strand at 2060.419 kb on + strand at 2060.419 kb on + strand at 2060.419 kb on + strand at 2060.419 kb on + strand at 2060.419 kb on + strand at 2060.419 kb on + strand at 2060.427 kb on - strand at 2060.427 kb on - strand at 2060.427 kb on - strand at 2060.427 kb on - strand at 2060.427 kb on - strand at 2060.427 kb on - strand at 2060.492 kb on + strand, within MPMX20_01968 at 2060.571 kb on - strand, within MPMX20_01968 at 2060.634 kb on - strand, within MPMX20_01968 at 2060.644 kb on + strand, within MPMX20_01968 at 2060.759 kb on + strand, within MPMX20_01968 at 2060.847 kb on + strand, within MPMX20_01968 at 2060.867 kb on - strand, within MPMX20_01968 at 2060.867 kb on - strand, within MPMX20_01968 at 2060.927 kb on + strand, within MPMX20_01968 at 2060.935 kb on - strand, within MPMX20_01968 at 2060.945 kb on - strand, within MPMX20_01968 at 2060.946 kb on - strand, within MPMX20_01968 at 2060.954 kb on - strand, within MPMX20_01968 at 2060.980 kb on + strand, within MPMX20_01968 at 2061.116 kb on + strand at 2061.207 kb on - strand at 2061.336 kb on + strand, within MPMX20_01969 at 2061.375 kb on - strand, within MPMX20_01969 at 2061.375 kb on - strand, within MPMX20_01969 at 2061.411 kb on + strand, within MPMX20_01969 at 2061.420 kb on + strand, within MPMX20_01969 at 2061.428 kb on - strand, within MPMX20_01969 at 2061.433 kb on - strand, within MPMX20_01969 at 2061.474 kb on + strand, within MPMX20_01969 at 2061.474 kb on + strand, within MPMX20_01969 at 2061.482 kb on - strand, within MPMX20_01969 at 2061.526 kb on + strand, within MPMX20_01969 at 2061.534 kb on - strand, within MPMX20_01969 at 2061.556 kb on + strand, within MPMX20_01969 at 2061.556 kb on + strand, within MPMX20_01969 at 2061.556 kb on + strand, within MPMX20_01969 at 2061.707 kb on - strand, within MPMX20_01969 at 2061.811 kb on + strand, within MPMX20_01969 at 2061.838 kb on + strand at 2061.877 kb on + strand at 2061.901 kb on - strand at 2061.903 kb on + strand at 2061.977 kb on - strand at 2062.012 kb on - strand at 2062.022 kb on + strand at 2062.116 kb on - strand, within MPMX20_01970 at 2062.116 kb on - strand, within MPMX20_01970 at 2062.147 kb on + strand, within MPMX20_01970 at 2062.166 kb on + strand, within MPMX20_01970 at 2062.166 kb on + strand, within MPMX20_01970 at 2062.174 kb on - strand, within MPMX20_01970 at 2062.174 kb on - strand, within MPMX20_01970 at 2062.176 kb on + strand, within MPMX20_01970 at 2062.176 kb on - strand, within MPMX20_01970
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,059,476 + +0.7 2,059,491 + +0.6 2,059,491 + -2.1 2,059,499 - +1.9 2,059,587 + +3.8 2,059,610 - -1.0 2,059,620 - +1.9 2,059,675 - MPMX20_01966 0.10 -1.4 2,059,675 - MPMX20_01966 0.10 +0.1 2,059,681 + MPMX20_01966 0.11 -1.3 2,059,686 + MPMX20_01966 0.12 -1.6 2,059,694 - MPMX20_01966 0.14 +1.9 2,059,723 - MPMX20_01966 0.20 +0.8 2,059,725 + MPMX20_01966 0.20 +1.3 2,059,725 + MPMX20_01966 0.20 +0.2 2,059,728 - MPMX20_01966 0.21 +0.6 2,059,733 - MPMX20_01966 0.22 +0.9 2,059,743 - MPMX20_01966 0.24 +0.0 2,059,750 + MPMX20_01966 0.26 -1.2 2,059,753 - MPMX20_01966 0.26 +0.1 2,059,790 + MPMX20_01966 0.34 -0.1 2,059,812 + MPMX20_01966 0.39 -1.6 2,059,820 - MPMX20_01966 0.40 -0.5 2,059,820 - MPMX20_01966 0.40 -0.8 2,059,820 - MPMX20_01966 0.40 +0.3 2,059,861 - MPMX20_01966 0.49 -0.7 2,059,863 - MPMX20_01966 0.49 +1.6 2,059,888 - MPMX20_01966 0.54 -1.8 2,059,914 + MPMX20_01966 0.60 +1.3 2,059,922 - MPMX20_01966 0.61 -1.0 2,059,932 + MPMX20_01966 0.64 -0.9 2,059,932 + MPMX20_01966 0.64 -1.2 2,059,981 - MPMX20_01966 0.74 -1.6 2,059,997 + MPMX20_01966 0.77 +0.1 2,060,154 + +0.6 2,060,161 + MPMX20_01967 0.13 -1.4 2,060,189 - MPMX20_01967 0.33 +0.9 2,060,229 - MPMX20_01967 0.62 -0.6 2,060,244 - MPMX20_01967 0.72 +0.4 2,060,270 - -0.8 2,060,315 + -0.6 2,060,315 + -0.8 2,060,320 + -1.0 2,060,328 - +0.6 2,060,345 + -0.2 2,060,348 - -1.5 2,060,348 - -2.2 2,060,355 + -2.0 2,060,379 + +1.3 2,060,382 - +1.3 2,060,394 + -1.0 2,060,409 + +0.6 2,060,409 + +2.3 2,060,409 + -0.1 2,060,409 + +1.9 2,060,417 - -1.3 2,060,417 - +0.5 2,060,417 - -0.2 2,060,417 - +0.8 2,060,417 - -1.0 2,060,417 - -0.3 2,060,419 + -1.6 2,060,419 + +1.6 2,060,419 + +0.1 2,060,419 + +0.3 2,060,419 + -0.1 2,060,419 + -0.4 2,060,427 - -0.6 2,060,427 - +3.9 2,060,427 - +0.7 2,060,427 - -1.6 2,060,427 - +0.6 2,060,427 - -0.8 2,060,492 + MPMX20_01968 0.11 -1.5 2,060,571 - MPMX20_01968 0.21 -0.9 2,060,634 - MPMX20_01968 0.29 -2.0 2,060,644 + MPMX20_01968 0.30 -1.0 2,060,759 + MPMX20_01968 0.45 -1.0 2,060,847 + MPMX20_01968 0.56 -1.0 2,060,867 - MPMX20_01968 0.59 -0.6 2,060,867 - MPMX20_01968 0.59 -2.1 2,060,927 + MPMX20_01968 0.66 -0.8 2,060,935 - MPMX20_01968 0.67 -0.6 2,060,945 - MPMX20_01968 0.69 +1.9 2,060,946 - MPMX20_01968 0.69 +0.1 2,060,954 - MPMX20_01968 0.70 +1.6 2,060,980 + MPMX20_01968 0.73 +0.2 2,061,116 + -1.3 2,061,207 - +0.0 2,061,336 + MPMX20_01969 0.11 +0.9 2,061,375 - MPMX20_01969 0.18 +0.1 2,061,375 - MPMX20_01969 0.18 +0.9 2,061,411 + MPMX20_01969 0.23 -1.3 2,061,420 + MPMX20_01969 0.25 +2.9 2,061,428 - MPMX20_01969 0.26 -1.7 2,061,433 - MPMX20_01969 0.27 +0.3 2,061,474 + MPMX20_01969 0.33 +0.3 2,061,474 + MPMX20_01969 0.33 +0.4 2,061,482 - MPMX20_01969 0.34 +0.9 2,061,526 + MPMX20_01969 0.41 +1.3 2,061,534 - MPMX20_01969 0.43 +0.9 2,061,556 + MPMX20_01969 0.46 +0.3 2,061,556 + MPMX20_01969 0.46 +1.3 2,061,556 + MPMX20_01969 0.46 +0.6 2,061,707 - MPMX20_01969 0.70 +1.3 2,061,811 + MPMX20_01969 0.86 +0.3 2,061,838 + -0.1 2,061,877 + +0.1 2,061,901 - +0.9 2,061,903 + -3.2 2,061,977 - -1.9 2,062,012 - +1.6 2,062,022 + +0.6 2,062,116 - MPMX20_01970 0.12 +1.9 2,062,116 - MPMX20_01970 0.12 +2.9 2,062,147 + MPMX20_01970 0.14 -1.6 2,062,166 + MPMX20_01970 0.15 -0.0 2,062,166 + MPMX20_01970 0.15 -0.9 2,062,174 - MPMX20_01970 0.15 -2.0 2,062,174 - MPMX20_01970 0.15 -0.6 2,062,176 + MPMX20_01970 0.16 -1.5 2,062,176 - MPMX20_01970 0.16 -1.5
Or see this region's nucleotide sequence