Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01459

Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01458 and MPMX20_01459 are separated by 17 nucleotidesMPMX20_01459 and MPMX20_01460 are separated by 287 nucleotides MPMX20_01458: MPMX20_01458 - hypothetical protein, at 1,523,965 to 1,526,328 _01458 MPMX20_01459: MPMX20_01459 - Hexuronate transporter, at 1,526,346 to 1,527,647 _01459 MPMX20_01460: MPMX20_01460 - HTH-type transcriptional repressor CytR, at 1,527,935 to 1,529,008 _01460 Position (kb) 1526 1527 1528Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1525.414 kb on - strand, within MPMX20_01458at 1525.432 kb on + strand, within MPMX20_01458at 1525.438 kb on + strand, within MPMX20_01458at 1525.455 kb on + strand, within MPMX20_01458at 1525.463 kb on + strand, within MPMX20_01458at 1525.499 kb on + strand, within MPMX20_01458at 1525.507 kb on - strand, within MPMX20_01458at 1525.576 kb on + strand, within MPMX20_01458at 1525.705 kb on + strand, within MPMX20_01458at 1525.713 kb on - strand, within MPMX20_01458at 1525.732 kb on + strand, within MPMX20_01458at 1525.757 kb on - strand, within MPMX20_01458at 1525.885 kb on - strand, within MPMX20_01458at 1525.893 kb on - strand, within MPMX20_01458at 1525.895 kb on - strand, within MPMX20_01458at 1525.989 kb on - strand, within MPMX20_01458at 1526.104 kb on + strandat 1526.104 kb on + strandat 1526.128 kb on + strandat 1526.168 kb on + strandat 1526.218 kb on + strandat 1526.268 kb on - strandat 1526.295 kb on + strandat 1526.405 kb on + strandat 1526.413 kb on - strandat 1526.435 kb on + strandat 1526.667 kb on - strand, within MPMX20_01459at 1526.700 kb on - strand, within MPMX20_01459at 1526.700 kb on - strand, within MPMX20_01459at 1526.717 kb on - strand, within MPMX20_01459at 1526.772 kb on + strand, within MPMX20_01459at 1526.778 kb on - strand, within MPMX20_01459at 1526.868 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.886 kb on - strand, within MPMX20_01459at 1526.886 kb on - strand, within MPMX20_01459at 1526.886 kb on - strand, within MPMX20_01459at 1526.886 kb on - strand, within MPMX20_01459at 1526.925 kb on - strand, within MPMX20_01459at 1526.986 kb on + strand, within MPMX20_01459at 1526.986 kb on + strand, within MPMX20_01459at 1526.994 kb on - strand, within MPMX20_01459at 1527.024 kb on - strand, within MPMX20_01459at 1527.046 kb on - strand, within MPMX20_01459at 1527.073 kb on + strand, within MPMX20_01459at 1527.073 kb on + strand, within MPMX20_01459at 1527.073 kb on + strand, within MPMX20_01459at 1527.081 kb on - strand, within MPMX20_01459at 1527.180 kb on + strand, within MPMX20_01459at 1527.289 kb on - strand, within MPMX20_01459at 1527.308 kb on - strand, within MPMX20_01459at 1527.389 kb on - strand, within MPMX20_01459at 1527.426 kb on - strand, within MPMX20_01459at 1527.458 kb on + strand, within MPMX20_01459at 1527.473 kb on - strand, within MPMX20_01459at 1527.475 kb on + strand, within MPMX20_01459at 1527.490 kb on - strand, within MPMX20_01459at 1527.490 kb on - strand, within MPMX20_01459at 1527.502 kb on - strand, within MPMX20_01459at 1527.508 kb on - strand, within MPMX20_01459at 1527.572 kb on + strandat 1527.572 kb on + strandat 1527.572 kb on + strandat 1527.572 kb on + strandat 1527.580 kb on - strandat 1527.580 kb on - strandat 1527.580 kb on - strandat 1527.580 kb on - strandat 1527.580 kb on - strandat 1527.633 kb on - strandat 1527.654 kb on - strandat 1527.664 kb on - strandat 1527.664 kb on - strandat 1527.788 kb on - strandat 1528.047 kb on + strand, within MPMX20_01460at 1528.049 kb on + strand, within MPMX20_01460at 1528.049 kb on + strand, within MPMX20_01460at 1528.052 kb on - strand, within MPMX20_01460at 1528.057 kb on - strand, within MPMX20_01460at 1528.057 kb on - strand, within MPMX20_01460at 1528.057 kb on - strand, within MPMX20_01460at 1528.057 kb on - strand, within MPMX20_01460at 1528.057 kb on - strand, within MPMX20_01460at 1528.057 kb on - strand, within MPMX20_01460at 1528.057 kb on - strand, within MPMX20_01460at 1528.143 kb on + strand, within MPMX20_01460at 1528.164 kb on - strand, within MPMX20_01460at 1528.200 kb on + strand, within MPMX20_01460at 1528.233 kb on - strand, within MPMX20_01460at 1528.288 kb on + strand, within MPMX20_01460at 1528.416 kb on + strand, within MPMX20_01460at 1528.474 kb on + strand, within MPMX20_01460at 1528.480 kb on + strand, within MPMX20_01460at 1528.504 kb on + strand, within MPMX20_01460at 1528.504 kb on + strand, within MPMX20_01460at 1528.504 kb on + strand, within MPMX20_01460at 1528.520 kb on - strand, within MPMX20_01460at 1528.554 kb on + strand, within MPMX20_01460at 1528.635 kb on + strand, within MPMX20_01460at 1528.635 kb on + strand, within MPMX20_01460at 1528.643 kb on - strand, within MPMX20_01460

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,525,414 - MPMX20_01458 0.61 +0.9
1,525,432 + MPMX20_01458 0.62 +1.5
1,525,438 + MPMX20_01458 0.62 -0.1
1,525,455 + MPMX20_01458 0.63 +0.9
1,525,463 + MPMX20_01458 0.63 -0.5
1,525,499 + MPMX20_01458 0.65 -0.9
1,525,507 - MPMX20_01458 0.65 +0.9
1,525,576 + MPMX20_01458 0.68 -1.2
1,525,705 + MPMX20_01458 0.74 +0.1
1,525,713 - MPMX20_01458 0.74 -0.3
1,525,732 + MPMX20_01458 0.75 +0.0
1,525,757 - MPMX20_01458 0.76 -0.0
1,525,885 - MPMX20_01458 0.81 +2.0
1,525,893 - MPMX20_01458 0.82 +1.1
1,525,895 - MPMX20_01458 0.82 -1.1
1,525,989 - MPMX20_01458 0.86 -2.0
1,526,104 + -2.6
1,526,104 + -0.6
1,526,128 + -0.7
1,526,168 + +1.6
1,526,218 + -2.4
1,526,268 - -0.5
1,526,295 + -1.1
1,526,405 + +1.2
1,526,413 - -0.9
1,526,435 + +0.1
1,526,667 - MPMX20_01459 0.25 -2.3
1,526,700 - MPMX20_01459 0.27 -0.4
1,526,700 - MPMX20_01459 0.27 -0.9
1,526,717 - MPMX20_01459 0.28 +0.6
1,526,772 + MPMX20_01459 0.33 +0.0
1,526,778 - MPMX20_01459 0.33 -0.1
1,526,868 + MPMX20_01459 0.40 +0.2
1,526,878 + MPMX20_01459 0.41 +2.9
1,526,878 + MPMX20_01459 0.41 -1.5
1,526,878 + MPMX20_01459 0.41 +0.3
1,526,878 + MPMX20_01459 0.41 +0.3
1,526,878 + MPMX20_01459 0.41 +0.1
1,526,878 + MPMX20_01459 0.41 -0.8
1,526,886 - MPMX20_01459 0.41 -1.0
1,526,886 - MPMX20_01459 0.41 -2.1
1,526,886 - MPMX20_01459 0.41 +0.1
1,526,886 - MPMX20_01459 0.41 -1.6
1,526,925 - MPMX20_01459 0.44 +0.3
1,526,986 + MPMX20_01459 0.49 +1.3
1,526,986 + MPMX20_01459 0.49 +0.3
1,526,994 - MPMX20_01459 0.50 -0.7
1,527,024 - MPMX20_01459 0.52 +0.0
1,527,046 - MPMX20_01459 0.54 -0.6
1,527,073 + MPMX20_01459 0.56 -0.1
1,527,073 + MPMX20_01459 0.56 +0.7
1,527,073 + MPMX20_01459 0.56 +1.4
1,527,081 - MPMX20_01459 0.56 -2.2
1,527,180 + MPMX20_01459 0.64 +0.7
1,527,289 - MPMX20_01459 0.72 +0.7
1,527,308 - MPMX20_01459 0.74 +2.8
1,527,389 - MPMX20_01459 0.80 -0.8
1,527,426 - MPMX20_01459 0.83 +0.6
1,527,458 + MPMX20_01459 0.85 +0.1
1,527,473 - MPMX20_01459 0.87 -1.5
1,527,475 + MPMX20_01459 0.87 -0.3
1,527,490 - MPMX20_01459 0.88 +3.5
1,527,490 - MPMX20_01459 0.88 -0.4
1,527,502 - MPMX20_01459 0.89 -0.7
1,527,508 - MPMX20_01459 0.89 +0.6
1,527,572 + +0.1
1,527,572 + -0.3
1,527,572 + -0.0
1,527,572 + -2.4
1,527,580 - -1.9
1,527,580 - +0.5
1,527,580 - +0.8
1,527,580 - -1.1
1,527,580 - -1.8
1,527,633 - +0.1
1,527,654 - +1.9
1,527,664 - -0.9
1,527,664 - -0.1
1,527,788 - +1.3
1,528,047 + MPMX20_01460 0.10 -1.2
1,528,049 + MPMX20_01460 0.11 -1.2
1,528,049 + MPMX20_01460 0.11 -0.9
1,528,052 - MPMX20_01460 0.11 +0.9
1,528,057 - MPMX20_01460 0.11 -0.6
1,528,057 - MPMX20_01460 0.11 -2.5
1,528,057 - MPMX20_01460 0.11 -0.9
1,528,057 - MPMX20_01460 0.11 +2.3
1,528,057 - MPMX20_01460 0.11 -0.1
1,528,057 - MPMX20_01460 0.11 -1.0
1,528,057 - MPMX20_01460 0.11 +0.2
1,528,143 + MPMX20_01460 0.19 -0.1
1,528,164 - MPMX20_01460 0.21 +0.0
1,528,200 + MPMX20_01460 0.25 -0.2
1,528,233 - MPMX20_01460 0.28 -1.0
1,528,288 + MPMX20_01460 0.33 -0.5
1,528,416 + MPMX20_01460 0.45 -0.4
1,528,474 + MPMX20_01460 0.50 -0.8
1,528,480 + MPMX20_01460 0.51 -1.2
1,528,504 + MPMX20_01460 0.53 -0.8
1,528,504 + MPMX20_01460 0.53 -0.6
1,528,504 + MPMX20_01460 0.53 +0.7
1,528,520 - MPMX20_01460 0.54 +3.9
1,528,554 + MPMX20_01460 0.58 -0.3
1,528,635 + MPMX20_01460 0.65 +0.6
1,528,635 + MPMX20_01460 0.65 -3.1
1,528,643 - MPMX20_01460 0.66 -0.3

Or see this region's nucleotide sequence