Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01458 and MPMX20_01459 are separated by 17 nucleotides MPMX20_01459 and MPMX20_01460 are separated by 287 nucleotides
MPMX20_01458: MPMX20_01458 - hypothetical protein, at 1,523,965 to 1,526,328
_01458
MPMX20_01459: MPMX20_01459 - Hexuronate transporter, at 1,526,346 to 1,527,647
_01459
MPMX20_01460: MPMX20_01460 - HTH-type transcriptional repressor CytR, at 1,527,935 to 1,529,008
_01460
Position (kb)
1526
1527
1528 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1525.414 kb on - strand, within MPMX20_01458 at 1525.432 kb on + strand, within MPMX20_01458 at 1525.438 kb on + strand, within MPMX20_01458 at 1525.455 kb on + strand, within MPMX20_01458 at 1525.463 kb on + strand, within MPMX20_01458 at 1525.499 kb on + strand, within MPMX20_01458 at 1525.507 kb on - strand, within MPMX20_01458 at 1525.576 kb on + strand, within MPMX20_01458 at 1525.705 kb on + strand, within MPMX20_01458 at 1525.713 kb on - strand, within MPMX20_01458 at 1525.732 kb on + strand, within MPMX20_01458 at 1525.757 kb on - strand, within MPMX20_01458 at 1525.885 kb on - strand, within MPMX20_01458 at 1525.893 kb on - strand, within MPMX20_01458 at 1525.895 kb on - strand, within MPMX20_01458 at 1525.989 kb on - strand, within MPMX20_01458 at 1526.104 kb on + strand at 1526.104 kb on + strand at 1526.128 kb on + strand at 1526.168 kb on + strand at 1526.218 kb on + strand at 1526.268 kb on - strand at 1526.295 kb on + strand at 1526.405 kb on + strand at 1526.413 kb on - strand at 1526.435 kb on + strand at 1526.667 kb on - strand, within MPMX20_01459 at 1526.700 kb on - strand, within MPMX20_01459 at 1526.700 kb on - strand, within MPMX20_01459 at 1526.717 kb on - strand, within MPMX20_01459 at 1526.772 kb on + strand, within MPMX20_01459 at 1526.778 kb on - strand, within MPMX20_01459 at 1526.868 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.886 kb on - strand, within MPMX20_01459 at 1526.886 kb on - strand, within MPMX20_01459 at 1526.886 kb on - strand, within MPMX20_01459 at 1526.886 kb on - strand, within MPMX20_01459 at 1526.925 kb on - strand, within MPMX20_01459 at 1526.986 kb on + strand, within MPMX20_01459 at 1526.986 kb on + strand, within MPMX20_01459 at 1526.994 kb on - strand, within MPMX20_01459 at 1527.024 kb on - strand, within MPMX20_01459 at 1527.046 kb on - strand, within MPMX20_01459 at 1527.073 kb on + strand, within MPMX20_01459 at 1527.073 kb on + strand, within MPMX20_01459 at 1527.073 kb on + strand, within MPMX20_01459 at 1527.081 kb on - strand, within MPMX20_01459 at 1527.180 kb on + strand, within MPMX20_01459 at 1527.289 kb on - strand, within MPMX20_01459 at 1527.308 kb on - strand, within MPMX20_01459 at 1527.389 kb on - strand, within MPMX20_01459 at 1527.426 kb on - strand, within MPMX20_01459 at 1527.458 kb on + strand, within MPMX20_01459 at 1527.473 kb on - strand, within MPMX20_01459 at 1527.475 kb on + strand, within MPMX20_01459 at 1527.490 kb on - strand, within MPMX20_01459 at 1527.490 kb on - strand, within MPMX20_01459 at 1527.502 kb on - strand, within MPMX20_01459 at 1527.508 kb on - strand, within MPMX20_01459 at 1527.572 kb on + strand at 1527.572 kb on + strand at 1527.572 kb on + strand at 1527.572 kb on + strand at 1527.580 kb on - strand at 1527.580 kb on - strand at 1527.580 kb on - strand at 1527.580 kb on - strand at 1527.580 kb on - strand at 1527.633 kb on - strand at 1527.654 kb on - strand at 1527.664 kb on - strand at 1527.664 kb on - strand at 1527.788 kb on - strand at 1528.047 kb on + strand, within MPMX20_01460 at 1528.049 kb on + strand, within MPMX20_01460 at 1528.049 kb on + strand, within MPMX20_01460 at 1528.052 kb on - strand, within MPMX20_01460 at 1528.057 kb on - strand, within MPMX20_01460 at 1528.057 kb on - strand, within MPMX20_01460 at 1528.057 kb on - strand, within MPMX20_01460 at 1528.057 kb on - strand, within MPMX20_01460 at 1528.057 kb on - strand, within MPMX20_01460 at 1528.057 kb on - strand, within MPMX20_01460 at 1528.057 kb on - strand, within MPMX20_01460 at 1528.143 kb on + strand, within MPMX20_01460 at 1528.164 kb on - strand, within MPMX20_01460 at 1528.200 kb on + strand, within MPMX20_01460 at 1528.233 kb on - strand, within MPMX20_01460 at 1528.288 kb on + strand, within MPMX20_01460 at 1528.416 kb on + strand, within MPMX20_01460 at 1528.474 kb on + strand, within MPMX20_01460 at 1528.480 kb on + strand, within MPMX20_01460 at 1528.504 kb on + strand, within MPMX20_01460 at 1528.504 kb on + strand, within MPMX20_01460 at 1528.504 kb on + strand, within MPMX20_01460 at 1528.520 kb on - strand, within MPMX20_01460 at 1528.554 kb on + strand, within MPMX20_01460 at 1528.635 kb on + strand, within MPMX20_01460 at 1528.635 kb on + strand, within MPMX20_01460 at 1528.643 kb on - strand, within MPMX20_01460
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,525,414 - MPMX20_01458 0.61 +0.9 1,525,432 + MPMX20_01458 0.62 +1.5 1,525,438 + MPMX20_01458 0.62 -0.1 1,525,455 + MPMX20_01458 0.63 +0.9 1,525,463 + MPMX20_01458 0.63 -0.5 1,525,499 + MPMX20_01458 0.65 -0.9 1,525,507 - MPMX20_01458 0.65 +0.9 1,525,576 + MPMX20_01458 0.68 -1.2 1,525,705 + MPMX20_01458 0.74 +0.1 1,525,713 - MPMX20_01458 0.74 -0.3 1,525,732 + MPMX20_01458 0.75 +0.0 1,525,757 - MPMX20_01458 0.76 -0.0 1,525,885 - MPMX20_01458 0.81 +2.0 1,525,893 - MPMX20_01458 0.82 +1.1 1,525,895 - MPMX20_01458 0.82 -1.1 1,525,989 - MPMX20_01458 0.86 -2.0 1,526,104 + -2.6 1,526,104 + -0.6 1,526,128 + -0.7 1,526,168 + +1.6 1,526,218 + -2.4 1,526,268 - -0.5 1,526,295 + -1.1 1,526,405 + +1.2 1,526,413 - -0.9 1,526,435 + +0.1 1,526,667 - MPMX20_01459 0.25 -2.3 1,526,700 - MPMX20_01459 0.27 -0.4 1,526,700 - MPMX20_01459 0.27 -0.9 1,526,717 - MPMX20_01459 0.28 +0.6 1,526,772 + MPMX20_01459 0.33 +0.0 1,526,778 - MPMX20_01459 0.33 -0.1 1,526,868 + MPMX20_01459 0.40 +0.2 1,526,878 + MPMX20_01459 0.41 +2.9 1,526,878 + MPMX20_01459 0.41 -1.5 1,526,878 + MPMX20_01459 0.41 +0.3 1,526,878 + MPMX20_01459 0.41 +0.3 1,526,878 + MPMX20_01459 0.41 +0.1 1,526,878 + MPMX20_01459 0.41 -0.8 1,526,886 - MPMX20_01459 0.41 -1.0 1,526,886 - MPMX20_01459 0.41 -2.1 1,526,886 - MPMX20_01459 0.41 +0.1 1,526,886 - MPMX20_01459 0.41 -1.6 1,526,925 - MPMX20_01459 0.44 +0.3 1,526,986 + MPMX20_01459 0.49 +1.3 1,526,986 + MPMX20_01459 0.49 +0.3 1,526,994 - MPMX20_01459 0.50 -0.7 1,527,024 - MPMX20_01459 0.52 +0.0 1,527,046 - MPMX20_01459 0.54 -0.6 1,527,073 + MPMX20_01459 0.56 -0.1 1,527,073 + MPMX20_01459 0.56 +0.7 1,527,073 + MPMX20_01459 0.56 +1.4 1,527,081 - MPMX20_01459 0.56 -2.2 1,527,180 + MPMX20_01459 0.64 +0.7 1,527,289 - MPMX20_01459 0.72 +0.7 1,527,308 - MPMX20_01459 0.74 +2.8 1,527,389 - MPMX20_01459 0.80 -0.8 1,527,426 - MPMX20_01459 0.83 +0.6 1,527,458 + MPMX20_01459 0.85 +0.1 1,527,473 - MPMX20_01459 0.87 -1.5 1,527,475 + MPMX20_01459 0.87 -0.3 1,527,490 - MPMX20_01459 0.88 +3.5 1,527,490 - MPMX20_01459 0.88 -0.4 1,527,502 - MPMX20_01459 0.89 -0.7 1,527,508 - MPMX20_01459 0.89 +0.6 1,527,572 + +0.1 1,527,572 + -0.3 1,527,572 + -0.0 1,527,572 + -2.4 1,527,580 - -1.9 1,527,580 - +0.5 1,527,580 - +0.8 1,527,580 - -1.1 1,527,580 - -1.8 1,527,633 - +0.1 1,527,654 - +1.9 1,527,664 - -0.9 1,527,664 - -0.1 1,527,788 - +1.3 1,528,047 + MPMX20_01460 0.10 -1.2 1,528,049 + MPMX20_01460 0.11 -1.2 1,528,049 + MPMX20_01460 0.11 -0.9 1,528,052 - MPMX20_01460 0.11 +0.9 1,528,057 - MPMX20_01460 0.11 -0.6 1,528,057 - MPMX20_01460 0.11 -2.5 1,528,057 - MPMX20_01460 0.11 -0.9 1,528,057 - MPMX20_01460 0.11 +2.3 1,528,057 - MPMX20_01460 0.11 -0.1 1,528,057 - MPMX20_01460 0.11 -1.0 1,528,057 - MPMX20_01460 0.11 +0.2 1,528,143 + MPMX20_01460 0.19 -0.1 1,528,164 - MPMX20_01460 0.21 +0.0 1,528,200 + MPMX20_01460 0.25 -0.2 1,528,233 - MPMX20_01460 0.28 -1.0 1,528,288 + MPMX20_01460 0.33 -0.5 1,528,416 + MPMX20_01460 0.45 -0.4 1,528,474 + MPMX20_01460 0.50 -0.8 1,528,480 + MPMX20_01460 0.51 -1.2 1,528,504 + MPMX20_01460 0.53 -0.8 1,528,504 + MPMX20_01460 0.53 -0.6 1,528,504 + MPMX20_01460 0.53 +0.7 1,528,520 - MPMX20_01460 0.54 +3.9 1,528,554 + MPMX20_01460 0.58 -0.3 1,528,635 + MPMX20_01460 0.65 +0.6 1,528,635 + MPMX20_01460 0.65 -3.1 1,528,643 - MPMX20_01460 0.66 -0.3
Or see this region's nucleotide sequence