Experiment: 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04136 and MPMX20_04137 are separated by 189 nucleotides MPMX20_04137 and MPMX20_04138 are separated by 169 nucleotides MPMX20_04138 and MPMX20_04139 are separated by 92 nucleotides
MPMX20_04136: MPMX20_04136 - Cell division protein ZapE, at 4,335,967 to 4,337,091
_04136
MPMX20_04137: MPMX20_04137 - Inner membrane protein YhcB, at 4,337,281 to 4,337,679
_04137
MPMX20_04138: MPMX20_04138 - Periplasmic pH-dependent serine endoprotease DegQ, at 4,337,849 to 4,339,216
_04138
MPMX20_04139: MPMX20_04139 - Serine endoprotease DegS, at 4,339,309 to 4,340,376
_04139
Position (kb)
4337
4338
4339
4340 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4336.866 kb on - strand, within MPMX20_04136 at 4336.884 kb on + strand, within MPMX20_04136 at 4336.921 kb on + strand, within MPMX20_04136 at 4336.921 kb on + strand, within MPMX20_04136 at 4336.926 kb on + strand, within MPMX20_04136 at 4336.929 kb on - strand, within MPMX20_04136 at 4336.929 kb on - strand, within MPMX20_04136 at 4336.929 kb on - strand, within MPMX20_04136 at 4336.948 kb on + strand, within MPMX20_04136 at 4337.023 kb on - strand at 4337.036 kb on + strand at 4337.042 kb on - strand at 4337.044 kb on - strand at 4337.046 kb on + strand at 4337.046 kb on + strand at 4337.054 kb on - strand at 4337.125 kb on - strand at 4337.154 kb on + strand at 4337.154 kb on + strand at 4337.154 kb on + strand at 4337.154 kb on + strand at 4337.154 kb on + strand at 4337.154 kb on + strand at 4337.162 kb on - strand at 4337.162 kb on - strand at 4337.162 kb on - strand at 4337.162 kb on - strand at 4337.177 kb on - strand at 4337.183 kb on + strand at 4337.188 kb on - strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.229 kb on + strand at 4337.237 kb on - strand at 4337.237 kb on - strand at 4337.237 kb on - strand at 4337.237 kb on - strand at 4337.237 kb on - strand at 4337.240 kb on + strand at 4337.249 kb on - strand at 4337.256 kb on - strand at 4337.258 kb on + strand at 4337.258 kb on - strand at 4337.258 kb on - strand at 4337.266 kb on - strand at 4337.285 kb on + strand at 4337.285 kb on - strand at 4337.293 kb on - strand at 4337.345 kb on - strand, within MPMX20_04137 at 4337.380 kb on + strand, within MPMX20_04137 at 4337.380 kb on + strand, within MPMX20_04137 at 4337.400 kb on + strand, within MPMX20_04137 at 4337.408 kb on - strand, within MPMX20_04137 at 4337.426 kb on + strand, within MPMX20_04137 at 4337.431 kb on + strand, within MPMX20_04137 at 4337.444 kb on + strand, within MPMX20_04137 at 4337.497 kb on - strand, within MPMX20_04137 at 4337.611 kb on + strand, within MPMX20_04137 at 4337.611 kb on + strand, within MPMX20_04137 at 4337.619 kb on - strand, within MPMX20_04137 at 4337.709 kb on + strand at 4337.709 kb on + strand at 4337.758 kb on + strand at 4337.766 kb on - strand at 4337.768 kb on + strand at 4337.869 kb on + strand at 4337.882 kb on - strand at 4337.885 kb on - strand at 4337.889 kb on + strand at 4337.889 kb on + strand at 4337.889 kb on + strand at 4337.897 kb on - strand at 4337.950 kb on + strand at 4338.019 kb on + strand, within MPMX20_04138 at 4338.027 kb on - strand, within MPMX20_04138 at 4338.053 kb on + strand, within MPMX20_04138 at 4338.116 kb on + strand, within MPMX20_04138 at 4338.152 kb on + strand, within MPMX20_04138 at 4338.161 kb on - strand, within MPMX20_04138 at 4338.161 kb on - strand, within MPMX20_04138 at 4338.199 kb on - strand, within MPMX20_04138 at 4338.199 kb on - strand, within MPMX20_04138 at 4338.201 kb on + strand, within MPMX20_04138 at 4338.208 kb on + strand, within MPMX20_04138 at 4338.208 kb on + strand, within MPMX20_04138 at 4338.208 kb on + strand, within MPMX20_04138 at 4338.216 kb on - strand, within MPMX20_04138 at 4338.216 kb on - strand, within MPMX20_04138 at 4338.226 kb on + strand, within MPMX20_04138 at 4338.249 kb on + strand, within MPMX20_04138 at 4338.259 kb on + strand, within MPMX20_04138 at 4338.272 kb on + strand, within MPMX20_04138 at 4338.282 kb on - strand, within MPMX20_04138 at 4338.332 kb on - strand, within MPMX20_04138 at 4338.380 kb on + strand, within MPMX20_04138 at 4338.413 kb on - strand, within MPMX20_04138 at 4338.477 kb on + strand, within MPMX20_04138 at 4338.529 kb on + strand, within MPMX20_04138 at 4338.562 kb on - strand, within MPMX20_04138 at 4338.642 kb on + strand, within MPMX20_04138 at 4338.645 kb on - strand, within MPMX20_04138 at 4338.645 kb on - strand, within MPMX20_04138 at 4338.703 kb on - strand, within MPMX20_04138 at 4338.732 kb on + strand, within MPMX20_04138 at 4338.732 kb on + strand, within MPMX20_04138 at 4338.809 kb on + strand, within MPMX20_04138 at 4338.817 kb on - strand, within MPMX20_04138 at 4338.878 kb on + strand, within MPMX20_04138 at 4338.978 kb on + strand, within MPMX20_04138 at 4338.978 kb on + strand, within MPMX20_04138 at 4338.986 kb on - strand, within MPMX20_04138 at 4338.986 kb on - strand, within MPMX20_04138 at 4338.986 kb on - strand, within MPMX20_04138 at 4338.986 kb on - strand, within MPMX20_04138 at 4339.029 kb on - strand, within MPMX20_04138 at 4339.050 kb on + strand, within MPMX20_04138 at 4339.050 kb on + strand, within MPMX20_04138 at 4339.122 kb on + strand at 4339.174 kb on + strand at 4339.182 kb on - strand at 4339.204 kb on - strand at 4339.225 kb on - strand at 4339.242 kb on - strand at 4339.242 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,336,866 - MPMX20_04136 0.80 +0.3 4,336,884 + MPMX20_04136 0.82 -0.6 4,336,921 + MPMX20_04136 0.85 -0.1 4,336,921 + MPMX20_04136 0.85 +0.3 4,336,926 + MPMX20_04136 0.85 -1.6 4,336,929 - MPMX20_04136 0.86 -1.5 4,336,929 - MPMX20_04136 0.86 +0.5 4,336,929 - MPMX20_04136 0.86 +0.7 4,336,948 + MPMX20_04136 0.87 +1.6 4,337,023 - -0.3 4,337,036 + -1.3 4,337,042 - -2.4 4,337,044 - -0.4 4,337,046 + +1.7 4,337,046 + -1.7 4,337,054 - +0.1 4,337,125 - -1.4 4,337,154 + -0.4 4,337,154 + +0.7 4,337,154 + -2.0 4,337,154 + -0.0 4,337,154 + -0.6 4,337,154 + -0.8 4,337,162 - +0.5 4,337,162 - -2.4 4,337,162 - -1.2 4,337,162 - -0.8 4,337,177 - +0.7 4,337,183 + -0.7 4,337,188 - -0.1 4,337,229 + -0.8 4,337,229 + +1.6 4,337,229 + +1.7 4,337,229 + +0.3 4,337,229 + -0.7 4,337,229 + -0.2 4,337,229 + +2.4 4,337,229 + -1.3 4,337,229 + -0.3 4,337,229 + -1.3 4,337,229 + -1.2 4,337,229 + -0.2 4,337,229 + +1.1 4,337,229 + -0.2 4,337,237 - -2.7 4,337,237 - -2.0 4,337,237 - -2.6 4,337,237 - -1.2 4,337,237 - +0.3 4,337,240 + +0.2 4,337,249 - -1.9 4,337,256 - +0.2 4,337,258 + +1.3 4,337,258 - +0.7 4,337,258 - +1.7 4,337,266 - -0.2 4,337,285 + -1.1 4,337,285 - -2.3 4,337,293 - -1.3 4,337,345 - MPMX20_04137 0.16 -1.7 4,337,380 + MPMX20_04137 0.25 -0.3 4,337,380 + MPMX20_04137 0.25 -0.2 4,337,400 + MPMX20_04137 0.30 -1.0 4,337,408 - MPMX20_04137 0.32 -1.2 4,337,426 + MPMX20_04137 0.36 +0.1 4,337,431 + MPMX20_04137 0.38 +0.1 4,337,444 + MPMX20_04137 0.41 +2.7 4,337,497 - MPMX20_04137 0.54 -1.2 4,337,611 + MPMX20_04137 0.83 +0.3 4,337,611 + MPMX20_04137 0.83 -0.8 4,337,619 - MPMX20_04137 0.85 -3.2 4,337,709 + -1.3 4,337,709 + -0.2 4,337,758 + +0.1 4,337,766 - +0.7 4,337,768 + +0.4 4,337,869 + -0.3 4,337,882 - -1.0 4,337,885 - -1.3 4,337,889 + +0.3 4,337,889 + -0.8 4,337,889 + -2.9 4,337,897 - -2.6 4,337,950 + -0.2 4,338,019 + MPMX20_04138 0.12 -1.3 4,338,027 - MPMX20_04138 0.13 +0.1 4,338,053 + MPMX20_04138 0.15 +0.7 4,338,116 + MPMX20_04138 0.20 -1.2 4,338,152 + MPMX20_04138 0.22 -1.6 4,338,161 - MPMX20_04138 0.23 +0.1 4,338,161 - MPMX20_04138 0.23 -1.2 4,338,199 - MPMX20_04138 0.26 -1.0 4,338,199 - MPMX20_04138 0.26 +0.8 4,338,201 + MPMX20_04138 0.26 +0.1 4,338,208 + MPMX20_04138 0.26 -2.0 4,338,208 + MPMX20_04138 0.26 -0.3 4,338,208 + MPMX20_04138 0.26 -2.0 4,338,216 - MPMX20_04138 0.27 -0.5 4,338,216 - MPMX20_04138 0.27 -1.0 4,338,226 + MPMX20_04138 0.28 -0.3 4,338,249 + MPMX20_04138 0.29 +1.7 4,338,259 + MPMX20_04138 0.30 -1.5 4,338,272 + MPMX20_04138 0.31 +1.3 4,338,282 - MPMX20_04138 0.32 -0.8 4,338,332 - MPMX20_04138 0.35 -0.3 4,338,380 + MPMX20_04138 0.39 +0.7 4,338,413 - MPMX20_04138 0.41 -0.8 4,338,477 + MPMX20_04138 0.46 +2.1 4,338,529 + MPMX20_04138 0.50 -0.4 4,338,562 - MPMX20_04138 0.52 -1.4 4,338,642 + MPMX20_04138 0.58 -2.9 4,338,645 - MPMX20_04138 0.58 +0.1 4,338,645 - MPMX20_04138 0.58 -0.5 4,338,703 - MPMX20_04138 0.62 -2.7 4,338,732 + MPMX20_04138 0.65 +1.4 4,338,732 + MPMX20_04138 0.65 +0.5 4,338,809 + MPMX20_04138 0.70 -0.3 4,338,817 - MPMX20_04138 0.71 -0.7 4,338,878 + MPMX20_04138 0.75 -1.7 4,338,978 + MPMX20_04138 0.83 +1.2 4,338,978 + MPMX20_04138 0.83 +0.9 4,338,986 - MPMX20_04138 0.83 +0.3 4,338,986 - MPMX20_04138 0.83 +0.7 4,338,986 - MPMX20_04138 0.83 -1.7 4,338,986 - MPMX20_04138 0.83 +0.7 4,339,029 - MPMX20_04138 0.86 +1.1 4,339,050 + MPMX20_04138 0.88 +0.6 4,339,050 + MPMX20_04138 0.88 -0.3 4,339,122 + -0.9 4,339,174 + -1.2 4,339,182 - +0.1 4,339,204 - -0.1 4,339,225 - +1.7 4,339,242 - -0.5 4,339,242 - -0.6
Or see this region's nucleotide sequence