Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03998

Experiment: 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03997 and MPMX20_03998 are separated by 263 nucleotidesMPMX20_03998 and MPMX20_03999 are separated by 235 nucleotides MPMX20_03997: MPMX20_03997 - scyllo-inositol 2-dehydrogenase (NADP(+)) IolU, at 4,193,773 to 4,194,771 _03997 MPMX20_03998: MPMX20_03998 - Putative membrane-bound redox modulator Alx, at 4,195,035 to 4,196,003 _03998 MPMX20_03999: MPMX20_03999 - Serine/threonine transporter SstT, at 4,196,239 to 4,197,480 _03999 Position (kb) 4195 4196 4197Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4194.057 kb on + strand, within MPMX20_03997at 4194.123 kb on + strand, within MPMX20_03997at 4194.169 kb on + strand, within MPMX20_03997at 4194.272 kb on + strand, within MPMX20_03997at 4194.272 kb on + strand, within MPMX20_03997at 4194.272 kb on + strand, within MPMX20_03997at 4194.272 kb on + strand, within MPMX20_03997at 4194.272 kb on + strand, within MPMX20_03997at 4194.272 kb on + strand, within MPMX20_03997at 4194.272 kb on + strand, within MPMX20_03997at 4194.272 kb on + strand, within MPMX20_03997at 4194.272 kb on + strand, within MPMX20_03997at 4194.280 kb on - strand, within MPMX20_03997at 4194.280 kb on - strand, within MPMX20_03997at 4194.280 kb on - strand, within MPMX20_03997at 4194.280 kb on - strand, within MPMX20_03997at 4194.280 kb on - strand, within MPMX20_03997at 4194.327 kb on + strand, within MPMX20_03997at 4194.335 kb on - strand, within MPMX20_03997at 4194.403 kb on - strand, within MPMX20_03997at 4194.403 kb on - strand, within MPMX20_03997at 4194.410 kb on + strand, within MPMX20_03997at 4194.433 kb on + strand, within MPMX20_03997at 4194.448 kb on - strand, within MPMX20_03997at 4194.448 kb on - strand, within MPMX20_03997at 4194.455 kb on + strand, within MPMX20_03997at 4194.455 kb on + strand, within MPMX20_03997at 4194.455 kb on + strand, within MPMX20_03997at 4194.455 kb on + strand, within MPMX20_03997at 4194.455 kb on + strand, within MPMX20_03997at 4194.463 kb on - strand, within MPMX20_03997at 4194.490 kb on + strand, within MPMX20_03997at 4194.543 kb on + strand, within MPMX20_03997at 4194.548 kb on + strand, within MPMX20_03997at 4194.548 kb on + strand, within MPMX20_03997at 4194.588 kb on + strand, within MPMX20_03997at 4194.605 kb on - strand, within MPMX20_03997at 4194.612 kb on + strand, within MPMX20_03997at 4194.620 kb on - strand, within MPMX20_03997at 4194.620 kb on - strand, within MPMX20_03997at 4194.620 kb on - strand, within MPMX20_03997at 4194.620 kb on - strand, within MPMX20_03997at 4194.624 kb on + strand, within MPMX20_03997at 4194.624 kb on + strand, within MPMX20_03997at 4194.625 kb on + strand, within MPMX20_03997at 4194.625 kb on + strand, within MPMX20_03997at 4194.627 kb on - strand, within MPMX20_03997at 4194.657 kb on + strand, within MPMX20_03997at 4194.657 kb on + strand, within MPMX20_03997at 4194.663 kb on - strand, within MPMX20_03997at 4194.670 kb on - strand, within MPMX20_03997at 4194.670 kb on - strand, within MPMX20_03997at 4194.670 kb on - strand, within MPMX20_03997at 4194.670 kb on - strand, within MPMX20_03997at 4194.730 kb on - strandat 4194.766 kb on + strandat 4194.766 kb on + strandat 4194.766 kb on + strandat 4194.766 kb on + strandat 4194.774 kb on - strandat 4194.774 kb on - strandat 4194.797 kb on - strandat 4194.797 kb on - strandat 4194.840 kb on + strandat 4194.989 kb on + strandat 4195.051 kb on + strandat 4195.059 kb on - strandat 4195.059 kb on - strandat 4195.088 kb on + strandat 4195.180 kb on - strand, within MPMX20_03998at 4195.180 kb on - strand, within MPMX20_03998at 4195.185 kb on - strand, within MPMX20_03998at 4195.191 kb on - strand, within MPMX20_03998at 4195.204 kb on - strand, within MPMX20_03998at 4195.214 kb on - strand, within MPMX20_03998at 4195.226 kb on - strand, within MPMX20_03998at 4195.236 kb on - strand, within MPMX20_03998at 4195.238 kb on - strand, within MPMX20_03998at 4195.322 kb on - strand, within MPMX20_03998at 4195.322 kb on - strand, within MPMX20_03998at 4195.350 kb on - strand, within MPMX20_03998at 4195.367 kb on - strand, within MPMX20_03998at 4195.379 kb on + strand, within MPMX20_03998at 4195.379 kb on + strand, within MPMX20_03998at 4195.379 kb on + strand, within MPMX20_03998at 4195.379 kb on + strand, within MPMX20_03998at 4195.387 kb on - strand, within MPMX20_03998at 4195.387 kb on - strand, within MPMX20_03998at 4195.394 kb on + strand, within MPMX20_03998at 4195.561 kb on - strand, within MPMX20_03998at 4195.565 kb on - strand, within MPMX20_03998at 4195.567 kb on + strand, within MPMX20_03998at 4195.600 kb on - strand, within MPMX20_03998at 4195.703 kb on - strand, within MPMX20_03998at 4195.726 kb on + strand, within MPMX20_03998at 4195.726 kb on + strand, within MPMX20_03998at 4195.726 kb on + strand, within MPMX20_03998at 4195.726 kb on + strand, within MPMX20_03998at 4195.726 kb on + strand, within MPMX20_03998at 4195.726 kb on + strand, within MPMX20_03998at 4195.726 kb on + strand, within MPMX20_03998at 4195.734 kb on - strand, within MPMX20_03998at 4195.734 kb on - strand, within MPMX20_03998at 4195.734 kb on - strand, within MPMX20_03998at 4195.734 kb on - strand, within MPMX20_03998at 4195.734 kb on - strand, within MPMX20_03998at 4195.734 kb on - strand, within MPMX20_03998at 4195.734 kb on - strand, within MPMX20_03998at 4195.734 kb on - strand, within MPMX20_03998at 4195.734 kb on - strand, within MPMX20_03998at 4195.750 kb on + strand, within MPMX20_03998at 4195.750 kb on + strand, within MPMX20_03998at 4195.750 kb on + strand, within MPMX20_03998at 4195.750 kb on + strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.758 kb on - strand, within MPMX20_03998at 4195.809 kb on + strand, within MPMX20_03998at 4195.827 kb on - strand, within MPMX20_03998at 4195.916 kb on - strandat 4195.923 kb on + strandat 4195.926 kb on - strandat 4195.926 kb on - strandat 4195.926 kb on - strandat 4195.937 kb on + strandat 4195.989 kb on + strandat 4196.011 kb on + strandat 4196.011 kb on + strandat 4196.022 kb on + strandat 4196.029 kb on - strandat 4196.030 kb on - strandat 4196.036 kb on - strandat 4196.058 kb on - strandat 4196.155 kb on - strandat 4196.270 kb on + strandat 4196.275 kb on + strandat 4196.280 kb on + strandat 4196.280 kb on + strandat 4196.283 kb on - strandat 4196.283 kb on - strandat 4196.368 kb on - strand, within MPMX20_03999at 4196.566 kb on + strand, within MPMX20_03999at 4196.571 kb on + strand, within MPMX20_03999at 4196.574 kb on - strand, within MPMX20_03999at 4196.667 kb on + strand, within MPMX20_03999at 4196.774 kb on - strand, within MPMX20_03999at 4196.832 kb on + strand, within MPMX20_03999at 4196.837 kb on + strand, within MPMX20_03999at 4196.869 kb on + strand, within MPMX20_03999at 4196.869 kb on + strand, within MPMX20_03999at 4196.869 kb on + strand, within MPMX20_03999at 4196.869 kb on + strand, within MPMX20_03999at 4196.869 kb on + strand, within MPMX20_03999at 4196.869 kb on + strand, within MPMX20_03999at 4196.869 kb on + strand, within MPMX20_03999at 4196.877 kb on - strand, within MPMX20_03999at 4196.877 kb on - strand, within MPMX20_03999at 4196.877 kb on - strand, within MPMX20_03999at 4196.879 kb on - strand, within MPMX20_03999at 4196.983 kb on + strand, within MPMX20_03999at 4196.991 kb on - strand, within MPMX20_03999at 4196.991 kb on - strand, within MPMX20_03999

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,194,057 + MPMX20_03997 0.28 -0.4
4,194,123 + MPMX20_03997 0.35 -0.9
4,194,169 + MPMX20_03997 0.40 +0.2
4,194,272 + MPMX20_03997 0.50 -0.4
4,194,272 + MPMX20_03997 0.50 -0.1
4,194,272 + MPMX20_03997 0.50 +2.2
4,194,272 + MPMX20_03997 0.50 +0.7
4,194,272 + MPMX20_03997 0.50 -1.7
4,194,272 + MPMX20_03997 0.50 +1.1
4,194,272 + MPMX20_03997 0.50 +0.2
4,194,272 + MPMX20_03997 0.50 -0.7
4,194,272 + MPMX20_03997 0.50 -0.5
4,194,280 - MPMX20_03997 0.51 -0.8
4,194,280 - MPMX20_03997 0.51 -2.3
4,194,280 - MPMX20_03997 0.51 +0.1
4,194,280 - MPMX20_03997 0.51 -0.3
4,194,280 - MPMX20_03997 0.51 +1.8
4,194,327 + MPMX20_03997 0.55 +0.0
4,194,335 - MPMX20_03997 0.56 -0.7
4,194,403 - MPMX20_03997 0.63 -0.9
4,194,403 - MPMX20_03997 0.63 -0.3
4,194,410 + MPMX20_03997 0.64 -0.9
4,194,433 + MPMX20_03997 0.66 -0.9
4,194,448 - MPMX20_03997 0.68 +0.6
4,194,448 - MPMX20_03997 0.68 -1.9
4,194,455 + MPMX20_03997 0.68 +2.7
4,194,455 + MPMX20_03997 0.68 -0.5
4,194,455 + MPMX20_03997 0.68 -0.9
4,194,455 + MPMX20_03997 0.68 -0.1
4,194,455 + MPMX20_03997 0.68 -1.8
4,194,463 - MPMX20_03997 0.69 -2.0
4,194,490 + MPMX20_03997 0.72 -0.6
4,194,543 + MPMX20_03997 0.77 -2.1
4,194,548 + MPMX20_03997 0.78 +0.0
4,194,548 + MPMX20_03997 0.78 +0.7
4,194,588 + MPMX20_03997 0.82 +0.3
4,194,605 - MPMX20_03997 0.83 -0.0
4,194,612 + MPMX20_03997 0.84 -0.0
4,194,620 - MPMX20_03997 0.85 -1.0
4,194,620 - MPMX20_03997 0.85 -1.3
4,194,620 - MPMX20_03997 0.85 -1.8
4,194,620 - MPMX20_03997 0.85 +1.1
4,194,624 + MPMX20_03997 0.85 +1.1
4,194,624 + MPMX20_03997 0.85 -1.1
4,194,625 + MPMX20_03997 0.85 +0.1
4,194,625 + MPMX20_03997 0.85 +0.9
4,194,627 - MPMX20_03997 0.85 +0.9
4,194,657 + MPMX20_03997 0.88 +1.7
4,194,657 + MPMX20_03997 0.88 -0.2
4,194,663 - MPMX20_03997 0.89 +0.1
4,194,670 - MPMX20_03997 0.90 -2.2
4,194,670 - MPMX20_03997 0.90 -0.9
4,194,670 - MPMX20_03997 0.90 -0.8
4,194,670 - MPMX20_03997 0.90 -0.1
4,194,730 - -0.9
4,194,766 + -0.6
4,194,766 + -0.7
4,194,766 + +0.1
4,194,766 + +0.5
4,194,774 - -1.5
4,194,774 - -0.9
4,194,797 - +1.3
4,194,797 - +0.3
4,194,840 + -0.7
4,194,989 + -2.2
4,195,051 + -0.8
4,195,059 - +1.1
4,195,059 - +1.7
4,195,088 + -0.9
4,195,180 - MPMX20_03998 0.15 +0.2
4,195,180 - MPMX20_03998 0.15 -0.8
4,195,185 - MPMX20_03998 0.15 -0.4
4,195,191 - MPMX20_03998 0.16 +0.1
4,195,204 - MPMX20_03998 0.17 -2.1
4,195,214 - MPMX20_03998 0.18 +1.1
4,195,226 - MPMX20_03998 0.20 -0.4
4,195,236 - MPMX20_03998 0.21 -0.2
4,195,238 - MPMX20_03998 0.21 -0.5
4,195,322 - MPMX20_03998 0.30 -0.3
4,195,322 - MPMX20_03998 0.30 -0.5
4,195,350 - MPMX20_03998 0.33 +1.5
4,195,367 - MPMX20_03998 0.34 -0.8
4,195,379 + MPMX20_03998 0.36 +0.6
4,195,379 + MPMX20_03998 0.36 -0.5
4,195,379 + MPMX20_03998 0.36 -1.0
4,195,379 + MPMX20_03998 0.36 -1.9
4,195,387 - MPMX20_03998 0.36 -0.0
4,195,387 - MPMX20_03998 0.36 -1.2
4,195,394 + MPMX20_03998 0.37 +2.1
4,195,561 - MPMX20_03998 0.54 -0.8
4,195,565 - MPMX20_03998 0.55 -1.5
4,195,567 + MPMX20_03998 0.55 -1.0
4,195,600 - MPMX20_03998 0.58 -0.3
4,195,703 - MPMX20_03998 0.69 +0.1
4,195,726 + MPMX20_03998 0.71 -2.0
4,195,726 + MPMX20_03998 0.71 -1.2
4,195,726 + MPMX20_03998 0.71 -1.3
4,195,726 + MPMX20_03998 0.71 -0.3
4,195,726 + MPMX20_03998 0.71 -1.4
4,195,726 + MPMX20_03998 0.71 -0.0
4,195,726 + MPMX20_03998 0.71 +1.2
4,195,734 - MPMX20_03998 0.72 +0.7
4,195,734 - MPMX20_03998 0.72 -0.6
4,195,734 - MPMX20_03998 0.72 +0.1
4,195,734 - MPMX20_03998 0.72 +0.6
4,195,734 - MPMX20_03998 0.72 -0.5
4,195,734 - MPMX20_03998 0.72 +0.0
4,195,734 - MPMX20_03998 0.72 -0.2
4,195,734 - MPMX20_03998 0.72 -0.4
4,195,734 - MPMX20_03998 0.72 +0.1
4,195,750 + MPMX20_03998 0.74 +1.1
4,195,750 + MPMX20_03998 0.74 -1.8
4,195,750 + MPMX20_03998 0.74 +0.3
4,195,750 + MPMX20_03998 0.74 +0.7
4,195,758 - MPMX20_03998 0.75 +1.3
4,195,758 - MPMX20_03998 0.75 -0.3
4,195,758 - MPMX20_03998 0.75 -0.2
4,195,758 - MPMX20_03998 0.75 +1.1
4,195,758 - MPMX20_03998 0.75 -0.5
4,195,758 - MPMX20_03998 0.75 -0.9
4,195,758 - MPMX20_03998 0.75 -3.2
4,195,758 - MPMX20_03998 0.75 +0.7
4,195,758 - MPMX20_03998 0.75 +0.3
4,195,758 - MPMX20_03998 0.75 -0.4
4,195,758 - MPMX20_03998 0.75 -1.1
4,195,758 - MPMX20_03998 0.75 -0.0
4,195,758 - MPMX20_03998 0.75 +0.1
4,195,758 - MPMX20_03998 0.75 -0.1
4,195,758 - MPMX20_03998 0.75 +0.3
4,195,758 - MPMX20_03998 0.75 +1.2
4,195,809 + MPMX20_03998 0.80 -1.1
4,195,827 - MPMX20_03998 0.82 -0.5
4,195,916 - +0.5
4,195,923 + -0.6
4,195,926 - -1.8
4,195,926 - -0.3
4,195,926 - +0.3
4,195,937 + +1.1
4,195,989 + +0.0
4,196,011 + +0.9
4,196,011 + +0.2
4,196,022 + -0.3
4,196,029 - -0.6
4,196,030 - -1.3
4,196,036 - -0.8
4,196,058 - -1.4
4,196,155 - -2.6
4,196,270 + -0.9
4,196,275 + -1.3
4,196,280 + -1.4
4,196,280 + -0.9
4,196,283 - -1.6
4,196,283 - +0.0
4,196,368 - MPMX20_03999 0.10 +0.8
4,196,566 + MPMX20_03999 0.26 -1.1
4,196,571 + MPMX20_03999 0.27 -1.2
4,196,574 - MPMX20_03999 0.27 +1.3
4,196,667 + MPMX20_03999 0.34 -1.6
4,196,774 - MPMX20_03999 0.43 -0.6
4,196,832 + MPMX20_03999 0.48 +0.3
4,196,837 + MPMX20_03999 0.48 +0.4
4,196,869 + MPMX20_03999 0.51 -0.2
4,196,869 + MPMX20_03999 0.51 -0.8
4,196,869 + MPMX20_03999 0.51 -1.6
4,196,869 + MPMX20_03999 0.51 -1.7
4,196,869 + MPMX20_03999 0.51 -1.1
4,196,869 + MPMX20_03999 0.51 -1.8
4,196,869 + MPMX20_03999 0.51 -0.2
4,196,877 - MPMX20_03999 0.51 -1.7
4,196,877 - MPMX20_03999 0.51 -0.9
4,196,877 - MPMX20_03999 0.51 +0.1
4,196,879 - MPMX20_03999 0.52 -0.6
4,196,983 + MPMX20_03999 0.60 -2.5
4,196,991 - MPMX20_03999 0.61 -0.8
4,196,991 - MPMX20_03999 0.61 +2.6

Or see this region's nucleotide sequence