Experiment: 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03997 and MPMX20_03998 are separated by 263 nucleotides MPMX20_03998 and MPMX20_03999 are separated by 235 nucleotides
MPMX20_03997: MPMX20_03997 - scyllo-inositol 2-dehydrogenase (NADP(+)) IolU, at 4,193,773 to 4,194,771
_03997
MPMX20_03998: MPMX20_03998 - Putative membrane-bound redox modulator Alx, at 4,195,035 to 4,196,003
_03998
MPMX20_03999: MPMX20_03999 - Serine/threonine transporter SstT, at 4,196,239 to 4,197,480
_03999
Position (kb)
4195
4196
4197 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4194.057 kb on + strand, within MPMX20_03997 at 4194.123 kb on + strand, within MPMX20_03997 at 4194.169 kb on + strand, within MPMX20_03997 at 4194.272 kb on + strand, within MPMX20_03997 at 4194.272 kb on + strand, within MPMX20_03997 at 4194.272 kb on + strand, within MPMX20_03997 at 4194.272 kb on + strand, within MPMX20_03997 at 4194.272 kb on + strand, within MPMX20_03997 at 4194.272 kb on + strand, within MPMX20_03997 at 4194.272 kb on + strand, within MPMX20_03997 at 4194.272 kb on + strand, within MPMX20_03997 at 4194.272 kb on + strand, within MPMX20_03997 at 4194.280 kb on - strand, within MPMX20_03997 at 4194.280 kb on - strand, within MPMX20_03997 at 4194.280 kb on - strand, within MPMX20_03997 at 4194.280 kb on - strand, within MPMX20_03997 at 4194.280 kb on - strand, within MPMX20_03997 at 4194.327 kb on + strand, within MPMX20_03997 at 4194.335 kb on - strand, within MPMX20_03997 at 4194.403 kb on - strand, within MPMX20_03997 at 4194.403 kb on - strand, within MPMX20_03997 at 4194.410 kb on + strand, within MPMX20_03997 at 4194.433 kb on + strand, within MPMX20_03997 at 4194.448 kb on - strand, within MPMX20_03997 at 4194.448 kb on - strand, within MPMX20_03997 at 4194.455 kb on + strand, within MPMX20_03997 at 4194.455 kb on + strand, within MPMX20_03997 at 4194.455 kb on + strand, within MPMX20_03997 at 4194.455 kb on + strand, within MPMX20_03997 at 4194.455 kb on + strand, within MPMX20_03997 at 4194.463 kb on - strand, within MPMX20_03997 at 4194.490 kb on + strand, within MPMX20_03997 at 4194.543 kb on + strand, within MPMX20_03997 at 4194.548 kb on + strand, within MPMX20_03997 at 4194.548 kb on + strand, within MPMX20_03997 at 4194.588 kb on + strand, within MPMX20_03997 at 4194.605 kb on - strand, within MPMX20_03997 at 4194.612 kb on + strand, within MPMX20_03997 at 4194.620 kb on - strand, within MPMX20_03997 at 4194.620 kb on - strand, within MPMX20_03997 at 4194.620 kb on - strand, within MPMX20_03997 at 4194.620 kb on - strand, within MPMX20_03997 at 4194.624 kb on + strand, within MPMX20_03997 at 4194.624 kb on + strand, within MPMX20_03997 at 4194.625 kb on + strand, within MPMX20_03997 at 4194.625 kb on + strand, within MPMX20_03997 at 4194.627 kb on - strand, within MPMX20_03997 at 4194.657 kb on + strand, within MPMX20_03997 at 4194.657 kb on + strand, within MPMX20_03997 at 4194.663 kb on - strand, within MPMX20_03997 at 4194.670 kb on - strand, within MPMX20_03997 at 4194.670 kb on - strand, within MPMX20_03997 at 4194.670 kb on - strand, within MPMX20_03997 at 4194.670 kb on - strand, within MPMX20_03997 at 4194.730 kb on - strand at 4194.766 kb on + strand at 4194.766 kb on + strand at 4194.766 kb on + strand at 4194.766 kb on + strand at 4194.774 kb on - strand at 4194.774 kb on - strand at 4194.797 kb on - strand at 4194.797 kb on - strand at 4194.840 kb on + strand at 4194.989 kb on + strand at 4195.051 kb on + strand at 4195.059 kb on - strand at 4195.059 kb on - strand at 4195.088 kb on + strand at 4195.180 kb on - strand, within MPMX20_03998 at 4195.180 kb on - strand, within MPMX20_03998 at 4195.185 kb on - strand, within MPMX20_03998 at 4195.191 kb on - strand, within MPMX20_03998 at 4195.204 kb on - strand, within MPMX20_03998 at 4195.214 kb on - strand, within MPMX20_03998 at 4195.226 kb on - strand, within MPMX20_03998 at 4195.236 kb on - strand, within MPMX20_03998 at 4195.238 kb on - strand, within MPMX20_03998 at 4195.322 kb on - strand, within MPMX20_03998 at 4195.322 kb on - strand, within MPMX20_03998 at 4195.350 kb on - strand, within MPMX20_03998 at 4195.367 kb on - strand, within MPMX20_03998 at 4195.379 kb on + strand, within MPMX20_03998 at 4195.379 kb on + strand, within MPMX20_03998 at 4195.379 kb on + strand, within MPMX20_03998 at 4195.379 kb on + strand, within MPMX20_03998 at 4195.387 kb on - strand, within MPMX20_03998 at 4195.387 kb on - strand, within MPMX20_03998 at 4195.394 kb on + strand, within MPMX20_03998 at 4195.561 kb on - strand, within MPMX20_03998 at 4195.565 kb on - strand, within MPMX20_03998 at 4195.567 kb on + strand, within MPMX20_03998 at 4195.600 kb on - strand, within MPMX20_03998 at 4195.703 kb on - strand, within MPMX20_03998 at 4195.726 kb on + strand, within MPMX20_03998 at 4195.726 kb on + strand, within MPMX20_03998 at 4195.726 kb on + strand, within MPMX20_03998 at 4195.726 kb on + strand, within MPMX20_03998 at 4195.726 kb on + strand, within MPMX20_03998 at 4195.726 kb on + strand, within MPMX20_03998 at 4195.726 kb on + strand, within MPMX20_03998 at 4195.734 kb on - strand, within MPMX20_03998 at 4195.734 kb on - strand, within MPMX20_03998 at 4195.734 kb on - strand, within MPMX20_03998 at 4195.734 kb on - strand, within MPMX20_03998 at 4195.734 kb on - strand, within MPMX20_03998 at 4195.734 kb on - strand, within MPMX20_03998 at 4195.734 kb on - strand, within MPMX20_03998 at 4195.734 kb on - strand, within MPMX20_03998 at 4195.734 kb on - strand, within MPMX20_03998 at 4195.750 kb on + strand, within MPMX20_03998 at 4195.750 kb on + strand, within MPMX20_03998 at 4195.750 kb on + strand, within MPMX20_03998 at 4195.750 kb on + strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.758 kb on - strand, within MPMX20_03998 at 4195.809 kb on + strand, within MPMX20_03998 at 4195.827 kb on - strand, within MPMX20_03998 at 4195.916 kb on - strand at 4195.923 kb on + strand at 4195.926 kb on - strand at 4195.926 kb on - strand at 4195.926 kb on - strand at 4195.937 kb on + strand at 4195.989 kb on + strand at 4196.011 kb on + strand at 4196.011 kb on + strand at 4196.022 kb on + strand at 4196.029 kb on - strand at 4196.030 kb on - strand at 4196.036 kb on - strand at 4196.058 kb on - strand at 4196.155 kb on - strand at 4196.270 kb on + strand at 4196.275 kb on + strand at 4196.280 kb on + strand at 4196.280 kb on + strand at 4196.283 kb on - strand at 4196.283 kb on - strand at 4196.368 kb on - strand, within MPMX20_03999 at 4196.566 kb on + strand, within MPMX20_03999 at 4196.571 kb on + strand, within MPMX20_03999 at 4196.574 kb on - strand, within MPMX20_03999 at 4196.667 kb on + strand, within MPMX20_03999 at 4196.774 kb on - strand, within MPMX20_03999 at 4196.832 kb on + strand, within MPMX20_03999 at 4196.837 kb on + strand, within MPMX20_03999 at 4196.869 kb on + strand, within MPMX20_03999 at 4196.869 kb on + strand, within MPMX20_03999 at 4196.869 kb on + strand, within MPMX20_03999 at 4196.869 kb on + strand, within MPMX20_03999 at 4196.869 kb on + strand, within MPMX20_03999 at 4196.869 kb on + strand, within MPMX20_03999 at 4196.869 kb on + strand, within MPMX20_03999 at 4196.877 kb on - strand, within MPMX20_03999 at 4196.877 kb on - strand, within MPMX20_03999 at 4196.877 kb on - strand, within MPMX20_03999 at 4196.879 kb on - strand, within MPMX20_03999 at 4196.983 kb on + strand, within MPMX20_03999 at 4196.991 kb on - strand, within MPMX20_03999 at 4196.991 kb on - strand, within MPMX20_03999
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,194,057 + MPMX20_03997 0.28 -0.4 4,194,123 + MPMX20_03997 0.35 -0.9 4,194,169 + MPMX20_03997 0.40 +0.2 4,194,272 + MPMX20_03997 0.50 -0.4 4,194,272 + MPMX20_03997 0.50 -0.1 4,194,272 + MPMX20_03997 0.50 +2.2 4,194,272 + MPMX20_03997 0.50 +0.7 4,194,272 + MPMX20_03997 0.50 -1.7 4,194,272 + MPMX20_03997 0.50 +1.1 4,194,272 + MPMX20_03997 0.50 +0.2 4,194,272 + MPMX20_03997 0.50 -0.7 4,194,272 + MPMX20_03997 0.50 -0.5 4,194,280 - MPMX20_03997 0.51 -0.8 4,194,280 - MPMX20_03997 0.51 -2.3 4,194,280 - MPMX20_03997 0.51 +0.1 4,194,280 - MPMX20_03997 0.51 -0.3 4,194,280 - MPMX20_03997 0.51 +1.8 4,194,327 + MPMX20_03997 0.55 +0.0 4,194,335 - MPMX20_03997 0.56 -0.7 4,194,403 - MPMX20_03997 0.63 -0.9 4,194,403 - MPMX20_03997 0.63 -0.3 4,194,410 + MPMX20_03997 0.64 -0.9 4,194,433 + MPMX20_03997 0.66 -0.9 4,194,448 - MPMX20_03997 0.68 +0.6 4,194,448 - MPMX20_03997 0.68 -1.9 4,194,455 + MPMX20_03997 0.68 +2.7 4,194,455 + MPMX20_03997 0.68 -0.5 4,194,455 + MPMX20_03997 0.68 -0.9 4,194,455 + MPMX20_03997 0.68 -0.1 4,194,455 + MPMX20_03997 0.68 -1.8 4,194,463 - MPMX20_03997 0.69 -2.0 4,194,490 + MPMX20_03997 0.72 -0.6 4,194,543 + MPMX20_03997 0.77 -2.1 4,194,548 + MPMX20_03997 0.78 +0.0 4,194,548 + MPMX20_03997 0.78 +0.7 4,194,588 + MPMX20_03997 0.82 +0.3 4,194,605 - MPMX20_03997 0.83 -0.0 4,194,612 + MPMX20_03997 0.84 -0.0 4,194,620 - MPMX20_03997 0.85 -1.0 4,194,620 - MPMX20_03997 0.85 -1.3 4,194,620 - MPMX20_03997 0.85 -1.8 4,194,620 - MPMX20_03997 0.85 +1.1 4,194,624 + MPMX20_03997 0.85 +1.1 4,194,624 + MPMX20_03997 0.85 -1.1 4,194,625 + MPMX20_03997 0.85 +0.1 4,194,625 + MPMX20_03997 0.85 +0.9 4,194,627 - MPMX20_03997 0.85 +0.9 4,194,657 + MPMX20_03997 0.88 +1.7 4,194,657 + MPMX20_03997 0.88 -0.2 4,194,663 - MPMX20_03997 0.89 +0.1 4,194,670 - MPMX20_03997 0.90 -2.2 4,194,670 - MPMX20_03997 0.90 -0.9 4,194,670 - MPMX20_03997 0.90 -0.8 4,194,670 - MPMX20_03997 0.90 -0.1 4,194,730 - -0.9 4,194,766 + -0.6 4,194,766 + -0.7 4,194,766 + +0.1 4,194,766 + +0.5 4,194,774 - -1.5 4,194,774 - -0.9 4,194,797 - +1.3 4,194,797 - +0.3 4,194,840 + -0.7 4,194,989 + -2.2 4,195,051 + -0.8 4,195,059 - +1.1 4,195,059 - +1.7 4,195,088 + -0.9 4,195,180 - MPMX20_03998 0.15 +0.2 4,195,180 - MPMX20_03998 0.15 -0.8 4,195,185 - MPMX20_03998 0.15 -0.4 4,195,191 - MPMX20_03998 0.16 +0.1 4,195,204 - MPMX20_03998 0.17 -2.1 4,195,214 - MPMX20_03998 0.18 +1.1 4,195,226 - MPMX20_03998 0.20 -0.4 4,195,236 - MPMX20_03998 0.21 -0.2 4,195,238 - MPMX20_03998 0.21 -0.5 4,195,322 - MPMX20_03998 0.30 -0.3 4,195,322 - MPMX20_03998 0.30 -0.5 4,195,350 - MPMX20_03998 0.33 +1.5 4,195,367 - MPMX20_03998 0.34 -0.8 4,195,379 + MPMX20_03998 0.36 +0.6 4,195,379 + MPMX20_03998 0.36 -0.5 4,195,379 + MPMX20_03998 0.36 -1.0 4,195,379 + MPMX20_03998 0.36 -1.9 4,195,387 - MPMX20_03998 0.36 -0.0 4,195,387 - MPMX20_03998 0.36 -1.2 4,195,394 + MPMX20_03998 0.37 +2.1 4,195,561 - MPMX20_03998 0.54 -0.8 4,195,565 - MPMX20_03998 0.55 -1.5 4,195,567 + MPMX20_03998 0.55 -1.0 4,195,600 - MPMX20_03998 0.58 -0.3 4,195,703 - MPMX20_03998 0.69 +0.1 4,195,726 + MPMX20_03998 0.71 -2.0 4,195,726 + MPMX20_03998 0.71 -1.2 4,195,726 + MPMX20_03998 0.71 -1.3 4,195,726 + MPMX20_03998 0.71 -0.3 4,195,726 + MPMX20_03998 0.71 -1.4 4,195,726 + MPMX20_03998 0.71 -0.0 4,195,726 + MPMX20_03998 0.71 +1.2 4,195,734 - MPMX20_03998 0.72 +0.7 4,195,734 - MPMX20_03998 0.72 -0.6 4,195,734 - MPMX20_03998 0.72 +0.1 4,195,734 - MPMX20_03998 0.72 +0.6 4,195,734 - MPMX20_03998 0.72 -0.5 4,195,734 - MPMX20_03998 0.72 +0.0 4,195,734 - MPMX20_03998 0.72 -0.2 4,195,734 - MPMX20_03998 0.72 -0.4 4,195,734 - MPMX20_03998 0.72 +0.1 4,195,750 + MPMX20_03998 0.74 +1.1 4,195,750 + MPMX20_03998 0.74 -1.8 4,195,750 + MPMX20_03998 0.74 +0.3 4,195,750 + MPMX20_03998 0.74 +0.7 4,195,758 - MPMX20_03998 0.75 +1.3 4,195,758 - MPMX20_03998 0.75 -0.3 4,195,758 - MPMX20_03998 0.75 -0.2 4,195,758 - MPMX20_03998 0.75 +1.1 4,195,758 - MPMX20_03998 0.75 -0.5 4,195,758 - MPMX20_03998 0.75 -0.9 4,195,758 - MPMX20_03998 0.75 -3.2 4,195,758 - MPMX20_03998 0.75 +0.7 4,195,758 - MPMX20_03998 0.75 +0.3 4,195,758 - MPMX20_03998 0.75 -0.4 4,195,758 - MPMX20_03998 0.75 -1.1 4,195,758 - MPMX20_03998 0.75 -0.0 4,195,758 - MPMX20_03998 0.75 +0.1 4,195,758 - MPMX20_03998 0.75 -0.1 4,195,758 - MPMX20_03998 0.75 +0.3 4,195,758 - MPMX20_03998 0.75 +1.2 4,195,809 + MPMX20_03998 0.80 -1.1 4,195,827 - MPMX20_03998 0.82 -0.5 4,195,916 - +0.5 4,195,923 + -0.6 4,195,926 - -1.8 4,195,926 - -0.3 4,195,926 - +0.3 4,195,937 + +1.1 4,195,989 + +0.0 4,196,011 + +0.9 4,196,011 + +0.2 4,196,022 + -0.3 4,196,029 - -0.6 4,196,030 - -1.3 4,196,036 - -0.8 4,196,058 - -1.4 4,196,155 - -2.6 4,196,270 + -0.9 4,196,275 + -1.3 4,196,280 + -1.4 4,196,280 + -0.9 4,196,283 - -1.6 4,196,283 - +0.0 4,196,368 - MPMX20_03999 0.10 +0.8 4,196,566 + MPMX20_03999 0.26 -1.1 4,196,571 + MPMX20_03999 0.27 -1.2 4,196,574 - MPMX20_03999 0.27 +1.3 4,196,667 + MPMX20_03999 0.34 -1.6 4,196,774 - MPMX20_03999 0.43 -0.6 4,196,832 + MPMX20_03999 0.48 +0.3 4,196,837 + MPMX20_03999 0.48 +0.4 4,196,869 + MPMX20_03999 0.51 -0.2 4,196,869 + MPMX20_03999 0.51 -0.8 4,196,869 + MPMX20_03999 0.51 -1.6 4,196,869 + MPMX20_03999 0.51 -1.7 4,196,869 + MPMX20_03999 0.51 -1.1 4,196,869 + MPMX20_03999 0.51 -1.8 4,196,869 + MPMX20_03999 0.51 -0.2 4,196,877 - MPMX20_03999 0.51 -1.7 4,196,877 - MPMX20_03999 0.51 -0.9 4,196,877 - MPMX20_03999 0.51 +0.1 4,196,879 - MPMX20_03999 0.52 -0.6 4,196,983 + MPMX20_03999 0.60 -2.5 4,196,991 - MPMX20_03999 0.61 -0.8 4,196,991 - MPMX20_03999 0.61 +2.6
Or see this region's nucleotide sequence