Experiment: 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01836 and MPMX20_01837 are separated by 145 nucleotides MPMX20_01837 and MPMX20_01838 are separated by 20 nucleotides MPMX20_01838 and MPMX20_01839 are separated by 114 nucleotides MPMX20_01839 and MPMX20_01840 are separated by 27 nucleotides
MPMX20_01836: MPMX20_01836 - hypothetical protein, at 1,930,072 to 1,930,518
_01836
MPMX20_01837: MPMX20_01837 - hypothetical protein, at 1,930,664 to 1,930,768
_01837
MPMX20_01838: MPMX20_01838 - hypothetical protein, at 1,930,789 to 1,931,289
_01838
MPMX20_01839: MPMX20_01839 - hypothetical protein, at 1,931,404 to 1,932,759
_01839
MPMX20_01840: MPMX20_01840 - hypothetical protein, at 1,932,787 to 1,934,721
_01840
Position (kb)
1931
1932
1933 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6
7 at 1930.405 kb on - strand, within MPMX20_01836 at 1930.498 kb on + strand at 1930.522 kb on - strand at 1930.537 kb on + strand at 1930.545 kb on - strand at 1930.590 kb on + strand at 1930.602 kb on + strand at 1930.602 kb on + strand at 1930.691 kb on + strand, within MPMX20_01837 at 1930.722 kb on + strand, within MPMX20_01837 at 1930.730 kb on - strand, within MPMX20_01837 at 1930.730 kb on - strand, within MPMX20_01837 at 1930.777 kb on - strand at 1930.812 kb on + strand at 1930.820 kb on - strand at 1930.915 kb on - strand, within MPMX20_01838 at 1931.027 kb on - strand, within MPMX20_01838 at 1931.057 kb on - strand, within MPMX20_01838 at 1931.119 kb on - strand, within MPMX20_01838 at 1931.120 kb on + strand, within MPMX20_01838 at 1931.141 kb on - strand, within MPMX20_01838 at 1931.141 kb on - strand, within MPMX20_01838 at 1931.227 kb on + strand, within MPMX20_01838 at 1931.235 kb on - strand, within MPMX20_01838 at 1931.250 kb on - strand at 1931.270 kb on + strand at 1931.285 kb on - strand at 1931.340 kb on + strand at 1931.416 kb on - strand at 1931.441 kb on + strand at 1931.461 kb on - strand at 1931.482 kb on - strand at 1931.525 kb on - strand at 1931.549 kb on - strand, within MPMX20_01839 at 1931.620 kb on - strand, within MPMX20_01839 at 1931.666 kb on + strand, within MPMX20_01839 at 1931.666 kb on + strand, within MPMX20_01839 at 1931.672 kb on + strand, within MPMX20_01839 at 1931.672 kb on + strand, within MPMX20_01839 at 1931.672 kb on + strand, within MPMX20_01839 at 1931.698 kb on + strand, within MPMX20_01839 at 1931.707 kb on - strand, within MPMX20_01839 at 1931.721 kb on + strand, within MPMX20_01839 at 1931.739 kb on - strand, within MPMX20_01839 at 1931.747 kb on - strand, within MPMX20_01839 at 1931.822 kb on + strand, within MPMX20_01839 at 1931.833 kb on + strand, within MPMX20_01839 at 1931.855 kb on + strand, within MPMX20_01839 at 1931.856 kb on + strand, within MPMX20_01839 at 1931.882 kb on + strand, within MPMX20_01839 at 1931.882 kb on + strand, within MPMX20_01839 at 1931.890 kb on - strand, within MPMX20_01839 at 1931.890 kb on - strand, within MPMX20_01839 at 1931.896 kb on + strand, within MPMX20_01839 at 1931.932 kb on + strand, within MPMX20_01839 at 1931.940 kb on - strand, within MPMX20_01839 at 1931.947 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.988 kb on + strand, within MPMX20_01839 at 1931.996 kb on - strand, within MPMX20_01839 at 1931.996 kb on - strand, within MPMX20_01839 at 1932.016 kb on + strand, within MPMX20_01839 at 1932.070 kb on - strand, within MPMX20_01839 at 1932.098 kb on + strand, within MPMX20_01839 at 1932.106 kb on - strand, within MPMX20_01839 at 1932.110 kb on + strand, within MPMX20_01839 at 1932.141 kb on - strand, within MPMX20_01839 at 1932.172 kb on + strand, within MPMX20_01839 at 1932.191 kb on + strand, within MPMX20_01839 at 1932.191 kb on + strand, within MPMX20_01839 at 1932.228 kb on - strand, within MPMX20_01839 at 1932.239 kb on + strand, within MPMX20_01839 at 1932.354 kb on + strand, within MPMX20_01839 at 1932.380 kb on + strand, within MPMX20_01839 at 1932.382 kb on - strand, within MPMX20_01839 at 1932.466 kb on - strand, within MPMX20_01839 at 1932.511 kb on + strand, within MPMX20_01839 at 1932.672 kb on + strand at 1932.693 kb on - strand at 1932.694 kb on + strand at 1932.721 kb on + strand at 1932.729 kb on - strand at 1932.729 kb on - strand at 1932.729 kb on - strand at 1933.118 kb on + strand, within MPMX20_01840 at 1933.249 kb on - strand, within MPMX20_01840 at 1933.256 kb on + strand, within MPMX20_01840 at 1933.312 kb on - strand, within MPMX20_01840 at 1933.333 kb on - strand, within MPMX20_01840 at 1933.416 kb on + strand, within MPMX20_01840 at 1933.421 kb on + strand, within MPMX20_01840 at 1933.458 kb on - strand, within MPMX20_01840 at 1933.477 kb on - strand, within MPMX20_01840 at 1933.479 kb on - strand, within MPMX20_01840 at 1933.507 kb on + strand, within MPMX20_01840 at 1933.509 kb on + strand, within MPMX20_01840 at 1933.632 kb on - strand, within MPMX20_01840 at 1933.635 kb on + strand, within MPMX20_01840 at 1933.661 kb on - strand, within MPMX20_01840 at 1933.710 kb on + strand, within MPMX20_01840 at 1933.710 kb on + strand, within MPMX20_01840 at 1933.710 kb on + strand, within MPMX20_01840 at 1933.718 kb on - strand, within MPMX20_01840 at 1933.718 kb on - strand, within MPMX20_01840 at 1933.718 kb on - strand, within MPMX20_01840
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,930,405 - MPMX20_01836 0.74 -0.3 1,930,498 + +2.3 1,930,522 - +1.0 1,930,537 + -0.4 1,930,545 - -1.7 1,930,590 + -0.9 1,930,602 + -0.3 1,930,602 + -0.8 1,930,691 + MPMX20_01837 0.26 +0.1 1,930,722 + MPMX20_01837 0.55 +0.1 1,930,730 - MPMX20_01837 0.63 -0.3 1,930,730 - MPMX20_01837 0.63 +0.6 1,930,777 - -1.4 1,930,812 + -0.2 1,930,820 - +0.0 1,930,915 - MPMX20_01838 0.25 +2.1 1,931,027 - MPMX20_01838 0.48 +0.5 1,931,057 - MPMX20_01838 0.53 -0.8 1,931,119 - MPMX20_01838 0.66 -0.8 1,931,120 + MPMX20_01838 0.66 -1.4 1,931,141 - MPMX20_01838 0.70 +1.8 1,931,141 - MPMX20_01838 0.70 -1.4 1,931,227 + MPMX20_01838 0.87 +0.4 1,931,235 - MPMX20_01838 0.89 -0.7 1,931,250 - +1.5 1,931,270 + -0.2 1,931,285 - +0.0 1,931,340 + -0.6 1,931,416 - +0.5 1,931,441 + -0.9 1,931,461 - -0.5 1,931,482 - +0.4 1,931,525 - +1.0 1,931,549 - MPMX20_01839 0.11 -0.4 1,931,620 - MPMX20_01839 0.16 +1.7 1,931,666 + MPMX20_01839 0.19 +0.5 1,931,666 + MPMX20_01839 0.19 -0.3 1,931,672 + MPMX20_01839 0.20 -0.7 1,931,672 + MPMX20_01839 0.20 +0.7 1,931,672 + MPMX20_01839 0.20 -1.4 1,931,698 + MPMX20_01839 0.22 -1.1 1,931,707 - MPMX20_01839 0.22 +0.2 1,931,721 + MPMX20_01839 0.23 +0.4 1,931,739 - MPMX20_01839 0.25 +1.7 1,931,747 - MPMX20_01839 0.25 -0.4 1,931,822 + MPMX20_01839 0.31 +1.1 1,931,833 + MPMX20_01839 0.32 +0.2 1,931,855 + MPMX20_01839 0.33 +0.1 1,931,856 + MPMX20_01839 0.33 -1.2 1,931,882 + MPMX20_01839 0.35 +2.0 1,931,882 + MPMX20_01839 0.35 +1.4 1,931,890 - MPMX20_01839 0.36 -1.2 1,931,890 - MPMX20_01839 0.36 +1.7 1,931,896 + MPMX20_01839 0.36 +0.8 1,931,932 + MPMX20_01839 0.39 -0.1 1,931,940 - MPMX20_01839 0.40 +0.7 1,931,947 + MPMX20_01839 0.40 -0.4 1,931,988 + MPMX20_01839 0.43 -0.1 1,931,988 + MPMX20_01839 0.43 -1.0 1,931,988 + MPMX20_01839 0.43 +0.5 1,931,988 + MPMX20_01839 0.43 +1.7 1,931,988 + MPMX20_01839 0.43 +0.6 1,931,996 - MPMX20_01839 0.44 +7.1 1,931,996 - MPMX20_01839 0.44 +0.1 1,932,016 + MPMX20_01839 0.45 -0.4 1,932,070 - MPMX20_01839 0.49 +0.7 1,932,098 + MPMX20_01839 0.51 +0.7 1,932,106 - MPMX20_01839 0.52 -0.9 1,932,110 + MPMX20_01839 0.52 +1.7 1,932,141 - MPMX20_01839 0.54 -0.0 1,932,172 + MPMX20_01839 0.57 +0.9 1,932,191 + MPMX20_01839 0.58 +1.1 1,932,191 + MPMX20_01839 0.58 -0.3 1,932,228 - MPMX20_01839 0.61 -0.0 1,932,239 + MPMX20_01839 0.62 +0.4 1,932,354 + MPMX20_01839 0.70 +1.4 1,932,380 + MPMX20_01839 0.72 +0.4 1,932,382 - MPMX20_01839 0.72 +0.1 1,932,466 - MPMX20_01839 0.78 -0.7 1,932,511 + MPMX20_01839 0.82 +0.1 1,932,672 + -0.9 1,932,693 - +0.0 1,932,694 + -0.1 1,932,721 + -0.9 1,932,729 - -0.2 1,932,729 - +0.7 1,932,729 - -1.1 1,933,118 + MPMX20_01840 0.17 +2.1 1,933,249 - MPMX20_01840 0.24 +1.6 1,933,256 + MPMX20_01840 0.24 -0.8 1,933,312 - MPMX20_01840 0.27 -0.3 1,933,333 - MPMX20_01840 0.28 +0.7 1,933,416 + MPMX20_01840 0.33 +0.5 1,933,421 + MPMX20_01840 0.33 -1.7 1,933,458 - MPMX20_01840 0.35 -1.1 1,933,477 - MPMX20_01840 0.36 +0.9 1,933,479 - MPMX20_01840 0.36 -0.3 1,933,507 + MPMX20_01840 0.37 +0.6 1,933,509 + MPMX20_01840 0.37 +0.8 1,933,632 - MPMX20_01840 0.44 -0.3 1,933,635 + MPMX20_01840 0.44 -1.0 1,933,661 - MPMX20_01840 0.45 -0.6 1,933,710 + MPMX20_01840 0.48 +0.2 1,933,710 + MPMX20_01840 0.48 +1.1 1,933,710 + MPMX20_01840 0.48 -0.3 1,933,718 - MPMX20_01840 0.48 +1.1 1,933,718 - MPMX20_01840 0.48 -0.1 1,933,718 - MPMX20_01840 0.48 +0.1
Or see this region's nucleotide sequence