Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01292

Experiment: 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01291 and MPMX20_01292 are separated by 139 nucleotidesMPMX20_01292 and MPMX20_01293 are separated by 16 nucleotides MPMX20_01291: MPMX20_01291 - D-alanyl-D-alanine carboxypeptidase DacA, at 1,351,335 to 1,352,546 _01291 MPMX20_01292: MPMX20_01292 - Endolytic peptidoglycan transglycosylase RlpA, at 1,352,686 to 1,353,798 _01292 MPMX20_01293: MPMX20_01293 - Peptidoglycan glycosyltransferase MrdB, at 1,353,815 to 1,354,927 _01293 Position (kb) 1352 1353 1354Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1351.760 kb on - strand, within MPMX20_01291at 1351.760 kb on - strand, within MPMX20_01291at 1351.769 kb on - strand, within MPMX20_01291at 1351.769 kb on - strand, within MPMX20_01291at 1351.769 kb on - strand, within MPMX20_01291at 1351.965 kb on - strand, within MPMX20_01291at 1351.978 kb on + strand, within MPMX20_01291at 1351.978 kb on + strand, within MPMX20_01291at 1351.981 kb on - strand, within MPMX20_01291at 1351.991 kb on - strand, within MPMX20_01291at 1351.998 kb on + strand, within MPMX20_01291at 1352.061 kb on + strand, within MPMX20_01291at 1352.138 kb on + strand, within MPMX20_01291at 1352.214 kb on - strand, within MPMX20_01291at 1352.274 kb on - strand, within MPMX20_01291at 1352.370 kb on + strand, within MPMX20_01291at 1352.372 kb on - strand, within MPMX20_01291at 1352.396 kb on + strand, within MPMX20_01291at 1352.434 kb on - strandat 1352.439 kb on + strandat 1352.468 kb on - strandat 1352.473 kb on - strandat 1352.492 kb on + strandat 1352.494 kb on + strandat 1352.499 kb on + strandat 1352.504 kb on + strandat 1352.552 kb on + strandat 1352.739 kb on + strandat 1352.793 kb on + strandat 1352.826 kb on - strand, within MPMX20_01292at 1352.871 kb on + strand, within MPMX20_01292at 1352.879 kb on - strand, within MPMX20_01292at 1352.885 kb on + strand, within MPMX20_01292at 1352.949 kb on - strand, within MPMX20_01292at 1353.136 kb on + strand, within MPMX20_01292at 1353.144 kb on - strand, within MPMX20_01292at 1353.193 kb on + strand, within MPMX20_01292at 1353.216 kb on - strand, within MPMX20_01292at 1353.216 kb on - strand, within MPMX20_01292at 1353.251 kb on + strand, within MPMX20_01292at 1353.302 kb on - strand, within MPMX20_01292at 1353.306 kb on + strand, within MPMX20_01292at 1353.319 kb on - strand, within MPMX20_01292at 1353.334 kb on - strand, within MPMX20_01292at 1353.342 kb on - strand, within MPMX20_01292at 1353.352 kb on - strand, within MPMX20_01292at 1353.376 kb on + strand, within MPMX20_01292at 1353.438 kb on - strand, within MPMX20_01292at 1353.510 kb on + strand, within MPMX20_01292at 1353.555 kb on - strand, within MPMX20_01292at 1353.561 kb on + strand, within MPMX20_01292at 1353.569 kb on - strand, within MPMX20_01292at 1353.721 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,351,760 - MPMX20_01291 0.35 -1.0
1,351,760 - MPMX20_01291 0.35 -2.8
1,351,769 - MPMX20_01291 0.36 -0.5
1,351,769 - MPMX20_01291 0.36 +0.4
1,351,769 - MPMX20_01291 0.36 +0.9
1,351,965 - MPMX20_01291 0.52 -0.6
1,351,978 + MPMX20_01291 0.53 -0.5
1,351,978 + MPMX20_01291 0.53 +0.0
1,351,981 - MPMX20_01291 0.53 -0.8
1,351,991 - MPMX20_01291 0.54 -1.2
1,351,998 + MPMX20_01291 0.55 -0.1
1,352,061 + MPMX20_01291 0.60 +0.0
1,352,138 + MPMX20_01291 0.66 -1.3
1,352,214 - MPMX20_01291 0.73 +0.1
1,352,274 - MPMX20_01291 0.77 -0.8
1,352,370 + MPMX20_01291 0.85 +0.4
1,352,372 - MPMX20_01291 0.86 -1.5
1,352,396 + MPMX20_01291 0.88 -2.3
1,352,434 - -1.4
1,352,439 + -1.1
1,352,468 - -1.2
1,352,473 - -0.1
1,352,492 + +1.0
1,352,494 + +0.2
1,352,499 + +0.4
1,352,504 + -1.1
1,352,552 + +1.1
1,352,739 + +1.2
1,352,793 + -1.7
1,352,826 - MPMX20_01292 0.13 -0.4
1,352,871 + MPMX20_01292 0.17 +2.7
1,352,879 - MPMX20_01292 0.17 +0.4
1,352,885 + MPMX20_01292 0.18 -0.8
1,352,949 - MPMX20_01292 0.24 -0.7
1,353,136 + MPMX20_01292 0.40 -0.8
1,353,144 - MPMX20_01292 0.41 -1.8
1,353,193 + MPMX20_01292 0.46 -1.0
1,353,216 - MPMX20_01292 0.48 -2.2
1,353,216 - MPMX20_01292 0.48 -1.6
1,353,251 + MPMX20_01292 0.51 -1.1
1,353,302 - MPMX20_01292 0.55 +0.7
1,353,306 + MPMX20_01292 0.56 +0.0
1,353,319 - MPMX20_01292 0.57 -1.0
1,353,334 - MPMX20_01292 0.58 +0.1
1,353,342 - MPMX20_01292 0.59 -1.1
1,353,352 - MPMX20_01292 0.60 +0.8
1,353,376 + MPMX20_01292 0.62 -3.0
1,353,438 - MPMX20_01292 0.68 -1.7
1,353,510 + MPMX20_01292 0.74 -1.1
1,353,555 - MPMX20_01292 0.78 +1.7
1,353,561 + MPMX20_01292 0.79 -1.8
1,353,569 - MPMX20_01292 0.79 -0.0
1,353,721 - -1.5

Or see this region's nucleotide sequence