Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04353

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04351 and MPMX20_04352 are separated by 72 nucleotidesMPMX20_04352 and MPMX20_04353 are separated by 4 nucleotidesMPMX20_04353 and MPMX20_04354 are separated by 144 nucleotides MPMX20_04351: MPMX20_04351 - Queuosine precursor transporter, at 4,545,271 to 4,545,936 _04351 MPMX20_04352: MPMX20_04352 - hypothetical protein, at 4,546,009 to 4,546,566 _04352 MPMX20_04353: MPMX20_04353 - putative MFS-type transporter YhhS, at 4,546,571 to 4,547,788 _04353 MPMX20_04354: MPMX20_04354 - Putative transport protein YhhT, at 4,547,933 to 4,548,982 _04354 Position (kb) 4546 4547 4548Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4545.586 kb on - strand, within MPMX20_04351at 4545.586 kb on - strand, within MPMX20_04351at 4545.614 kb on + strand, within MPMX20_04351at 4545.622 kb on - strand, within MPMX20_04351at 4545.784 kb on + strand, within MPMX20_04351at 4545.821 kb on + strand, within MPMX20_04351at 4545.821 kb on + strand, within MPMX20_04351at 4545.821 kb on + strand, within MPMX20_04351at 4545.821 kb on + strand, within MPMX20_04351at 4545.829 kb on - strand, within MPMX20_04351at 4545.829 kb on - strand, within MPMX20_04351at 4545.829 kb on - strand, within MPMX20_04351at 4545.829 kb on - strand, within MPMX20_04351at 4545.837 kb on - strand, within MPMX20_04351at 4545.844 kb on + strand, within MPMX20_04351at 4545.893 kb on - strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.963 kb on - strandat 4546.034 kb on + strandat 4546.056 kb on - strandat 4546.056 kb on - strandat 4546.096 kb on - strand, within MPMX20_04352at 4546.108 kb on + strand, within MPMX20_04352at 4546.111 kb on - strand, within MPMX20_04352at 4546.111 kb on - strand, within MPMX20_04352at 4546.113 kb on + strand, within MPMX20_04352at 4546.164 kb on - strand, within MPMX20_04352at 4546.177 kb on + strand, within MPMX20_04352at 4546.218 kb on + strand, within MPMX20_04352at 4546.227 kb on + strand, within MPMX20_04352at 4546.227 kb on + strand, within MPMX20_04352at 4546.227 kb on + strand, within MPMX20_04352at 4546.235 kb on - strand, within MPMX20_04352at 4546.256 kb on - strand, within MPMX20_04352at 4546.299 kb on - strand, within MPMX20_04352at 4546.324 kb on + strand, within MPMX20_04352at 4546.329 kb on + strand, within MPMX20_04352at 4546.334 kb on + strand, within MPMX20_04352at 4546.337 kb on - strand, within MPMX20_04352at 4546.462 kb on + strand, within MPMX20_04352at 4546.576 kb on + strandat 4546.584 kb on - strandat 4546.681 kb on - strandat 4546.722 kb on + strand, within MPMX20_04353at 4546.725 kb on - strand, within MPMX20_04353at 4546.750 kb on + strand, within MPMX20_04353at 4546.904 kb on - strand, within MPMX20_04353at 4546.904 kb on - strand, within MPMX20_04353at 4546.908 kb on - strand, within MPMX20_04353at 4546.987 kb on - strand, within MPMX20_04353at 4547.012 kb on - strand, within MPMX20_04353at 4547.029 kb on - strand, within MPMX20_04353at 4547.029 kb on - strand, within MPMX20_04353at 4547.036 kb on + strand, within MPMX20_04353at 4547.044 kb on - strand, within MPMX20_04353at 4547.050 kb on - strand, within MPMX20_04353at 4547.124 kb on + strand, within MPMX20_04353at 4547.124 kb on + strand, within MPMX20_04353at 4547.124 kb on + strand, within MPMX20_04353at 4547.132 kb on - strand, within MPMX20_04353at 4547.132 kb on - strand, within MPMX20_04353at 4547.135 kb on + strand, within MPMX20_04353at 4547.143 kb on - strand, within MPMX20_04353at 4547.143 kb on - strand, within MPMX20_04353at 4547.175 kb on + strand, within MPMX20_04353at 4547.175 kb on + strand, within MPMX20_04353at 4547.234 kb on + strand, within MPMX20_04353at 4547.235 kb on - strand, within MPMX20_04353at 4547.235 kb on - strand, within MPMX20_04353at 4547.263 kb on + strand, within MPMX20_04353at 4547.277 kb on + strand, within MPMX20_04353at 4547.428 kb on + strand, within MPMX20_04353at 4547.433 kb on + strand, within MPMX20_04353at 4547.441 kb on - strand, within MPMX20_04353at 4547.441 kb on - strand, within MPMX20_04353at 4547.441 kb on - strand, within MPMX20_04353at 4547.451 kb on - strand, within MPMX20_04353at 4547.500 kb on - strand, within MPMX20_04353at 4547.500 kb on - strand, within MPMX20_04353at 4547.539 kb on + strand, within MPMX20_04353at 4547.547 kb on - strand, within MPMX20_04353at 4547.552 kb on - strand, within MPMX20_04353at 4547.575 kb on - strand, within MPMX20_04353at 4547.580 kb on + strand, within MPMX20_04353at 4547.582 kb on + strand, within MPMX20_04353at 4547.582 kb on + strand, within MPMX20_04353at 4547.590 kb on - strand, within MPMX20_04353at 4547.590 kb on - strand, within MPMX20_04353at 4547.595 kb on + strand, within MPMX20_04353at 4547.598 kb on + strand, within MPMX20_04353at 4547.764 kb on - strandat 4547.787 kb on - strandat 4547.799 kb on - strandat 4547.872 kb on + strandat 4547.895 kb on + strandat 4547.895 kb on + strandat 4547.903 kb on - strandat 4547.903 kb on - strandat 4547.903 kb on - strandat 4547.903 kb on - strandat 4547.910 kb on + strandat 4547.917 kb on + strandat 4547.929 kb on + strandat 4547.944 kb on - strandat 4547.955 kb on + strandat 4547.955 kb on - strandat 4547.963 kb on + strandat 4547.968 kb on - strandat 4547.971 kb on - strandat 4547.988 kb on + strandat 4547.988 kb on + strandat 4547.996 kb on - strandat 4547.996 kb on - strandat 4548.008 kb on + strandat 4548.018 kb on - strandat 4548.018 kb on - strandat 4548.043 kb on + strand, within MPMX20_04354at 4548.111 kb on + strand, within MPMX20_04354at 4548.199 kb on + strand, within MPMX20_04354at 4548.207 kb on - strand, within MPMX20_04354at 4548.215 kb on + strand, within MPMX20_04354at 4548.220 kb on + strand, within MPMX20_04354at 4548.228 kb on - strand, within MPMX20_04354at 4548.228 kb on - strand, within MPMX20_04354at 4548.228 kb on - strand, within MPMX20_04354at 4548.228 kb on - strand, within MPMX20_04354at 4548.310 kb on - strand, within MPMX20_04354at 4548.328 kb on + strand, within MPMX20_04354at 4548.329 kb on + strand, within MPMX20_04354at 4548.329 kb on + strand, within MPMX20_04354at 4548.329 kb on + strand, within MPMX20_04354at 4548.336 kb on - strand, within MPMX20_04354at 4548.336 kb on - strand, within MPMX20_04354at 4548.337 kb on - strand, within MPMX20_04354at 4548.347 kb on + strand, within MPMX20_04354at 4548.381 kb on + strand, within MPMX20_04354at 4548.407 kb on + strand, within MPMX20_04354at 4548.418 kb on + strand, within MPMX20_04354at 4548.426 kb on - strand, within MPMX20_04354at 4548.451 kb on - strand, within MPMX20_04354at 4548.463 kb on - strand, within MPMX20_04354at 4548.485 kb on + strand, within MPMX20_04354at 4548.485 kb on + strand, within MPMX20_04354at 4548.485 kb on + strand, within MPMX20_04354at 4548.485 kb on + strand, within MPMX20_04354at 4548.485 kb on + strand, within MPMX20_04354at 4548.493 kb on - strand, within MPMX20_04354at 4548.493 kb on - strand, within MPMX20_04354at 4548.493 kb on - strand, within MPMX20_04354at 4548.493 kb on - strand, within MPMX20_04354at 4548.493 kb on - strand, within MPMX20_04354at 4548.493 kb on - strand, within MPMX20_04354at 4548.493 kb on - strand, within MPMX20_04354at 4548.498 kb on + strand, within MPMX20_04354at 4548.522 kb on - strand, within MPMX20_04354at 4548.544 kb on + strand, within MPMX20_04354at 4548.555 kb on + strand, within MPMX20_04354at 4548.575 kb on - strand, within MPMX20_04354at 4548.581 kb on - strand, within MPMX20_04354at 4548.604 kb on + strand, within MPMX20_04354at 4548.604 kb on + strand, within MPMX20_04354at 4548.604 kb on + strand, within MPMX20_04354at 4548.604 kb on + strand, within MPMX20_04354at 4548.604 kb on + strand, within MPMX20_04354at 4548.604 kb on + strand, within MPMX20_04354at 4548.612 kb on - strand, within MPMX20_04354at 4548.612 kb on - strand, within MPMX20_04354at 4548.612 kb on - strand, within MPMX20_04354at 4548.612 kb on - strand, within MPMX20_04354at 4548.622 kb on - strand, within MPMX20_04354at 4548.631 kb on + strand, within MPMX20_04354at 4548.658 kb on + strand, within MPMX20_04354at 4548.666 kb on - strand, within MPMX20_04354at 4548.666 kb on - strand, within MPMX20_04354at 4548.666 kb on - strand, within MPMX20_04354at 4548.701 kb on + strand, within MPMX20_04354at 4548.702 kb on + strand, within MPMX20_04354at 4548.721 kb on + strand, within MPMX20_04354at 4548.721 kb on + strand, within MPMX20_04354at 4548.733 kb on + strand, within MPMX20_04354at 4548.733 kb on + strand, within MPMX20_04354at 4548.733 kb on + strand, within MPMX20_04354at 4548.733 kb on + strand, within MPMX20_04354at 4548.733 kb on + strand, within MPMX20_04354at 4548.733 kb on + strand, within MPMX20_04354at 4548.733 kb on + strand, within MPMX20_04354at 4548.741 kb on - strand, within MPMX20_04354at 4548.752 kb on + strand, within MPMX20_04354at 4548.760 kb on - strand, within MPMX20_04354at 4548.765 kb on + strand, within MPMX20_04354at 4548.765 kb on + strand, within MPMX20_04354at 4548.775 kb on + strand, within MPMX20_04354at 4548.788 kb on - strand, within MPMX20_04354

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,545,586 - MPMX20_04351 0.47 +0.1
4,545,586 - MPMX20_04351 0.47 -0.6
4,545,614 + MPMX20_04351 0.52 +0.1
4,545,622 - MPMX20_04351 0.53 -0.9
4,545,784 + MPMX20_04351 0.77 +0.1
4,545,821 + MPMX20_04351 0.83 -0.4
4,545,821 + MPMX20_04351 0.83 -0.2
4,545,821 + MPMX20_04351 0.83 -0.2
4,545,821 + MPMX20_04351 0.83 +0.9
4,545,829 - MPMX20_04351 0.84 -0.3
4,545,829 - MPMX20_04351 0.84 -0.6
4,545,829 - MPMX20_04351 0.84 +0.4
4,545,829 - MPMX20_04351 0.84 -1.9
4,545,837 - MPMX20_04351 0.85 +0.1
4,545,844 + MPMX20_04351 0.86 +0.8
4,545,893 - +0.3
4,545,931 + -1.7
4,545,931 + -0.6
4,545,931 + -1.0
4,545,931 + -0.1
4,545,931 + -0.5
4,545,931 + +0.6
4,545,931 + -1.2
4,545,931 + +1.4
4,545,931 + -2.2
4,545,931 + +0.5
4,545,931 + -0.4
4,545,939 - -0.1
4,545,939 - -0.8
4,545,939 - +0.2
4,545,939 - -0.6
4,545,939 - -1.0
4,545,939 - +0.4
4,545,939 - -1.4
4,545,939 - +0.1
4,545,939 - -1.5
4,545,939 - -0.2
4,545,939 - +0.1
4,545,939 - +0.5
4,545,939 - +0.0
4,545,939 - +0.0
4,545,963 - +0.5
4,546,034 + -0.5
4,546,056 - -3.5
4,546,056 - -0.5
4,546,096 - MPMX20_04352 0.16 -2.1
4,546,108 + MPMX20_04352 0.18 -0.2
4,546,111 - MPMX20_04352 0.18 -1.9
4,546,111 - MPMX20_04352 0.18 -1.0
4,546,113 + MPMX20_04352 0.19 -1.8
4,546,164 - MPMX20_04352 0.28 -1.5
4,546,177 + MPMX20_04352 0.30 +2.0
4,546,218 + MPMX20_04352 0.37 -1.0
4,546,227 + MPMX20_04352 0.39 +1.4
4,546,227 + MPMX20_04352 0.39 -1.0
4,546,227 + MPMX20_04352 0.39 -1.6
4,546,235 - MPMX20_04352 0.41 -1.9
4,546,256 - MPMX20_04352 0.44 -0.8
4,546,299 - MPMX20_04352 0.52 -1.0
4,546,324 + MPMX20_04352 0.56 -0.4
4,546,329 + MPMX20_04352 0.57 -1.5
4,546,334 + MPMX20_04352 0.58 +0.4
4,546,337 - MPMX20_04352 0.59 -3.8
4,546,462 + MPMX20_04352 0.81 +0.1
4,546,576 + +0.1
4,546,584 - -1.1
4,546,681 - +0.9
4,546,722 + MPMX20_04353 0.12 +0.2
4,546,725 - MPMX20_04353 0.13 +0.8
4,546,750 + MPMX20_04353 0.15 +0.9
4,546,904 - MPMX20_04353 0.27 -2.2
4,546,904 - MPMX20_04353 0.27 -0.7
4,546,908 - MPMX20_04353 0.28 +0.4
4,546,987 - MPMX20_04353 0.34 +1.4
4,547,012 - MPMX20_04353 0.36 -0.9
4,547,029 - MPMX20_04353 0.38 -1.0
4,547,029 - MPMX20_04353 0.38 -0.6
4,547,036 + MPMX20_04353 0.38 -1.3
4,547,044 - MPMX20_04353 0.39 +0.0
4,547,050 - MPMX20_04353 0.39 +0.8
4,547,124 + MPMX20_04353 0.45 -0.0
4,547,124 + MPMX20_04353 0.45 +0.2
4,547,124 + MPMX20_04353 0.45 -1.2
4,547,132 - MPMX20_04353 0.46 -1.1
4,547,132 - MPMX20_04353 0.46 -1.1
4,547,135 + MPMX20_04353 0.46 +0.8
4,547,143 - MPMX20_04353 0.47 +1.0
4,547,143 - MPMX20_04353 0.47 -0.1
4,547,175 + MPMX20_04353 0.50 +0.4
4,547,175 + MPMX20_04353 0.50 +1.0
4,547,234 + MPMX20_04353 0.54 -0.3
4,547,235 - MPMX20_04353 0.55 -0.8
4,547,235 - MPMX20_04353 0.55 -1.5
4,547,263 + MPMX20_04353 0.57 -0.3
4,547,277 + MPMX20_04353 0.58 -1.2
4,547,428 + MPMX20_04353 0.70 -0.0
4,547,433 + MPMX20_04353 0.71 -0.6
4,547,441 - MPMX20_04353 0.71 -0.1
4,547,441 - MPMX20_04353 0.71 -1.2
4,547,441 - MPMX20_04353 0.71 -0.5
4,547,451 - MPMX20_04353 0.72 -1.5
4,547,500 - MPMX20_04353 0.76 +1.4
4,547,500 - MPMX20_04353 0.76 +0.3
4,547,539 + MPMX20_04353 0.79 -0.2
4,547,547 - MPMX20_04353 0.80 -0.7
4,547,552 - MPMX20_04353 0.81 +1.0
4,547,575 - MPMX20_04353 0.82 +1.4
4,547,580 + MPMX20_04353 0.83 -1.0
4,547,582 + MPMX20_04353 0.83 -0.5
4,547,582 + MPMX20_04353 0.83 +0.4
4,547,590 - MPMX20_04353 0.84 -0.8
4,547,590 - MPMX20_04353 0.84 -1.7
4,547,595 + MPMX20_04353 0.84 -0.8
4,547,598 + MPMX20_04353 0.84 -2.9
4,547,764 - -0.7
4,547,787 - -0.0
4,547,799 - -0.0
4,547,872 + -0.2
4,547,895 + -0.6
4,547,895 + -1.0
4,547,903 - -1.3
4,547,903 - +0.4
4,547,903 - -1.8
4,547,903 - +0.9
4,547,910 + -0.4
4,547,917 + -0.1
4,547,929 + +0.5
4,547,944 - +0.4
4,547,955 + +0.8
4,547,955 - -2.1
4,547,963 + -1.1
4,547,968 - -1.1
4,547,971 - -0.4
4,547,988 + +0.2
4,547,988 + -0.9
4,547,996 - -1.1
4,547,996 - +0.3
4,548,008 + +0.5
4,548,018 - -0.2
4,548,018 - -0.2
4,548,043 + MPMX20_04354 0.10 +0.2
4,548,111 + MPMX20_04354 0.17 -2.3
4,548,199 + MPMX20_04354 0.25 +0.6
4,548,207 - MPMX20_04354 0.26 -0.1
4,548,215 + MPMX20_04354 0.27 +0.5
4,548,220 + MPMX20_04354 0.27 -0.4
4,548,228 - MPMX20_04354 0.28 -1.1
4,548,228 - MPMX20_04354 0.28 -0.1
4,548,228 - MPMX20_04354 0.28 -0.2
4,548,228 - MPMX20_04354 0.28 -0.1
4,548,310 - MPMX20_04354 0.36 -1.0
4,548,328 + MPMX20_04354 0.38 +0.2
4,548,329 + MPMX20_04354 0.38 -0.4
4,548,329 + MPMX20_04354 0.38 +0.4
4,548,329 + MPMX20_04354 0.38 +0.9
4,548,336 - MPMX20_04354 0.38 +0.1
4,548,336 - MPMX20_04354 0.38 +0.2
4,548,337 - MPMX20_04354 0.38 +2.4
4,548,347 + MPMX20_04354 0.39 -0.5
4,548,381 + MPMX20_04354 0.43 +1.4
4,548,407 + MPMX20_04354 0.45 +0.3
4,548,418 + MPMX20_04354 0.46 +1.7
4,548,426 - MPMX20_04354 0.47 -0.4
4,548,451 - MPMX20_04354 0.49 +0.6
4,548,463 - MPMX20_04354 0.50 -0.1
4,548,485 + MPMX20_04354 0.53 +0.4
4,548,485 + MPMX20_04354 0.53 -0.1
4,548,485 + MPMX20_04354 0.53 +1.4
4,548,485 + MPMX20_04354 0.53 +0.8
4,548,485 + MPMX20_04354 0.53 -0.5
4,548,493 - MPMX20_04354 0.53 +0.8
4,548,493 - MPMX20_04354 0.53 -1.0
4,548,493 - MPMX20_04354 0.53 +0.5
4,548,493 - MPMX20_04354 0.53 -1.0
4,548,493 - MPMX20_04354 0.53 +2.5
4,548,493 - MPMX20_04354 0.53 +1.4
4,548,493 - MPMX20_04354 0.53 +0.9
4,548,498 + MPMX20_04354 0.54 +0.9
4,548,522 - MPMX20_04354 0.56 +1.4
4,548,544 + MPMX20_04354 0.58 -0.7
4,548,555 + MPMX20_04354 0.59 -0.6
4,548,575 - MPMX20_04354 0.61 +0.1
4,548,581 - MPMX20_04354 0.62 +2.9
4,548,604 + MPMX20_04354 0.64 -0.6
4,548,604 + MPMX20_04354 0.64 -0.3
4,548,604 + MPMX20_04354 0.64 -1.1
4,548,604 + MPMX20_04354 0.64 -1.2
4,548,604 + MPMX20_04354 0.64 -0.5
4,548,604 + MPMX20_04354 0.64 +0.8
4,548,612 - MPMX20_04354 0.65 -0.3
4,548,612 - MPMX20_04354 0.65 +1.4
4,548,612 - MPMX20_04354 0.65 -0.7
4,548,612 - MPMX20_04354 0.65 +1.4
4,548,622 - MPMX20_04354 0.66 +2.9
4,548,631 + MPMX20_04354 0.66 +1.4
4,548,658 + MPMX20_04354 0.69 -0.9
4,548,666 - MPMX20_04354 0.70 -1.4
4,548,666 - MPMX20_04354 0.70 -1.0
4,548,666 - MPMX20_04354 0.70 -1.0
4,548,701 + MPMX20_04354 0.73 -1.1
4,548,702 + MPMX20_04354 0.73 +0.2
4,548,721 + MPMX20_04354 0.75 +0.6
4,548,721 + MPMX20_04354 0.75 +0.0
4,548,733 + MPMX20_04354 0.76 +0.0
4,548,733 + MPMX20_04354 0.76 +0.4
4,548,733 + MPMX20_04354 0.76 +0.3
4,548,733 + MPMX20_04354 0.76 -2.1
4,548,733 + MPMX20_04354 0.76 +1.5
4,548,733 + MPMX20_04354 0.76 -0.4
4,548,733 + MPMX20_04354 0.76 -0.3
4,548,741 - MPMX20_04354 0.77 +0.7
4,548,752 + MPMX20_04354 0.78 +0.8
4,548,760 - MPMX20_04354 0.79 -0.2
4,548,765 + MPMX20_04354 0.79 -0.6
4,548,765 + MPMX20_04354 0.79 -1.6
4,548,775 + MPMX20_04354 0.80 -1.3
4,548,788 - MPMX20_04354 0.81 +0.8

Or see this region's nucleotide sequence