Experiment: TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04483 and MPMX20_04484 are separated by 1 nucleotides MPMX20_04484 and MPMX20_04485 are separated by 4 nucleotides MPMX20_04485 and MPMX20_04486 overlap by 4 nucleotides
MPMX20_04483: MPMX20_04483 - Lipid III flippase, at 4,686,901 to 4,688,151
_04483
MPMX20_04484: MPMX20_04484 - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 4,688,153 to 4,689,283
_04484
MPMX20_04485: MPMX20_04485 - dTDP-fucosamine acetyltransferase, at 4,689,288 to 4,689,965
_04485
MPMX20_04486: MPMX20_04486 - UDP-N-acetyl-D-mannosamine dehydrogenase, at 4,689,962 to 4,691,224
_04486
Position (kb)
4688
4689
4690 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4687.166 kb on + strand, within MPMX20_04483 at 4687.236 kb on + strand, within MPMX20_04483 at 4687.251 kb on + strand, within MPMX20_04483 at 4687.411 kb on + strand, within MPMX20_04483 at 4687.464 kb on + strand, within MPMX20_04483 at 4687.540 kb on - strand, within MPMX20_04483 at 4687.551 kb on - strand, within MPMX20_04483 at 4687.827 kb on + strand, within MPMX20_04483 at 4687.828 kb on + strand, within MPMX20_04483 at 4687.833 kb on + strand, within MPMX20_04483 at 4687.841 kb on - strand, within MPMX20_04483 at 4687.911 kb on - strand, within MPMX20_04483 at 4687.919 kb on + strand, within MPMX20_04483 at 4687.999 kb on + strand, within MPMX20_04483 at 4688.009 kb on + strand, within MPMX20_04483 at 4688.009 kb on + strand, within MPMX20_04483 at 4688.122 kb on + strand at 4688.175 kb on + strand at 4688.183 kb on - strand at 4688.197 kb on - strand at 4688.202 kb on + strand at 4688.211 kb on + strand at 4688.229 kb on - strand at 4688.264 kb on - strand at 4688.358 kb on - strand, within MPMX20_04484 at 4688.358 kb on - strand, within MPMX20_04484 at 4688.400 kb on + strand, within MPMX20_04484 at 4688.447 kb on - strand, within MPMX20_04484 at 4688.538 kb on + strand, within MPMX20_04484 at 4688.538 kb on + strand, within MPMX20_04484 at 4688.546 kb on - strand, within MPMX20_04484 at 4688.546 kb on - strand, within MPMX20_04484 at 4688.546 kb on - strand, within MPMX20_04484 at 4688.609 kb on + strand, within MPMX20_04484 at 4688.616 kb on - strand, within MPMX20_04484 at 4688.679 kb on + strand, within MPMX20_04484 at 4688.697 kb on - strand, within MPMX20_04484 at 4688.697 kb on - strand, within MPMX20_04484 at 4688.697 kb on - strand, within MPMX20_04484 at 4688.755 kb on + strand, within MPMX20_04484 at 4688.755 kb on + strand, within MPMX20_04484 at 4688.824 kb on - strand, within MPMX20_04484 at 4688.896 kb on - strand, within MPMX20_04484 at 4688.919 kb on - strand, within MPMX20_04484 at 4688.958 kb on + strand, within MPMX20_04484 at 4689.016 kb on + strand, within MPMX20_04484 at 4689.016 kb on + strand, within MPMX20_04484 at 4689.019 kb on - strand, within MPMX20_04484 at 4689.024 kb on - strand, within MPMX20_04484 at 4689.037 kb on + strand, within MPMX20_04484 at 4689.052 kb on - strand, within MPMX20_04484 at 4689.117 kb on + strand, within MPMX20_04484 at 4689.193 kb on - strand at 4689.218 kb on + strand at 4689.218 kb on + strand at 4689.218 kb on + strand at 4689.226 kb on - strand at 4689.226 kb on - strand at 4689.374 kb on - strand, within MPMX20_04485 at 4689.374 kb on - strand, within MPMX20_04485 at 4689.388 kb on + strand, within MPMX20_04485 at 4689.414 kb on + strand, within MPMX20_04485 at 4689.450 kb on + strand, within MPMX20_04485 at 4689.479 kb on + strand, within MPMX20_04485 at 4689.554 kb on + strand, within MPMX20_04485 at 4689.617 kb on + strand, within MPMX20_04485 at 4689.621 kb on + strand, within MPMX20_04485 at 4689.629 kb on - strand, within MPMX20_04485 at 4689.654 kb on + strand, within MPMX20_04485 at 4689.685 kb on - strand, within MPMX20_04485 at 4689.687 kb on + strand, within MPMX20_04485 at 4689.687 kb on + strand, within MPMX20_04485 at 4689.690 kb on - strand, within MPMX20_04485 at 4689.754 kb on - strand, within MPMX20_04485 at 4689.754 kb on - strand, within MPMX20_04485 at 4689.757 kb on + strand, within MPMX20_04485 at 4689.765 kb on - strand, within MPMX20_04485 at 4689.775 kb on - strand, within MPMX20_04485 at 4689.808 kb on - strand, within MPMX20_04485 at 4689.861 kb on + strand, within MPMX20_04485 at 4689.861 kb on + strand, within MPMX20_04485 at 4689.906 kb on - strand at 4690.003 kb on - strand at 4690.006 kb on + strand at 4690.174 kb on - strand, within MPMX20_04486 at 4690.176 kb on + strand, within MPMX20_04486 at 4690.184 kb on - strand, within MPMX20_04486 at 4690.243 kb on + strand, within MPMX20_04486 at 4690.243 kb on + strand, within MPMX20_04486 at 4690.243 kb on + strand, within MPMX20_04486 at 4690.251 kb on - strand, within MPMX20_04486
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,687,166 + MPMX20_04483 0.21 -0.3 4,687,236 + MPMX20_04483 0.27 -2.1 4,687,251 + MPMX20_04483 0.28 -1.7 4,687,411 + MPMX20_04483 0.41 -0.3 4,687,464 + MPMX20_04483 0.45 -1.7 4,687,540 - MPMX20_04483 0.51 -1.0 4,687,551 - MPMX20_04483 0.52 +1.3 4,687,827 + MPMX20_04483 0.74 -2.5 4,687,828 + MPMX20_04483 0.74 -1.3 4,687,833 + MPMX20_04483 0.75 -2.0 4,687,841 - MPMX20_04483 0.75 -2.1 4,687,911 - MPMX20_04483 0.81 -1.8 4,687,919 + MPMX20_04483 0.81 -2.9 4,687,999 + MPMX20_04483 0.88 -2.9 4,688,009 + MPMX20_04483 0.89 -0.7 4,688,009 + MPMX20_04483 0.89 -3.5 4,688,122 + -2.5 4,688,175 + -1.9 4,688,183 - -0.4 4,688,197 - -1.5 4,688,202 + +1.7 4,688,211 + -0.7 4,688,229 - +0.1 4,688,264 - -0.7 4,688,358 - MPMX20_04484 0.18 -2.4 4,688,358 - MPMX20_04484 0.18 -2.0 4,688,400 + MPMX20_04484 0.22 -1.6 4,688,447 - MPMX20_04484 0.26 -2.1 4,688,538 + MPMX20_04484 0.34 -0.2 4,688,538 + MPMX20_04484 0.34 -0.7 4,688,546 - MPMX20_04484 0.35 -1.0 4,688,546 - MPMX20_04484 0.35 -2.9 4,688,546 - MPMX20_04484 0.35 +0.3 4,688,609 + MPMX20_04484 0.40 -0.2 4,688,616 - MPMX20_04484 0.41 -1.5 4,688,679 + MPMX20_04484 0.47 -1.9 4,688,697 - MPMX20_04484 0.48 +1.3 4,688,697 - MPMX20_04484 0.48 -0.5 4,688,697 - MPMX20_04484 0.48 -3.0 4,688,755 + MPMX20_04484 0.53 -2.6 4,688,755 + MPMX20_04484 0.53 -2.6 4,688,824 - MPMX20_04484 0.59 -1.8 4,688,896 - MPMX20_04484 0.66 +0.0 4,688,919 - MPMX20_04484 0.68 -2.0 4,688,958 + MPMX20_04484 0.71 -2.1 4,689,016 + MPMX20_04484 0.76 -1.2 4,689,016 + MPMX20_04484 0.76 -0.8 4,689,019 - MPMX20_04484 0.77 -1.0 4,689,024 - MPMX20_04484 0.77 -0.7 4,689,037 + MPMX20_04484 0.78 -2.7 4,689,052 - MPMX20_04484 0.79 -2.1 4,689,117 + MPMX20_04484 0.85 -2.4 4,689,193 - -0.7 4,689,218 + -1.5 4,689,218 + -1.5 4,689,218 + -0.3 4,689,226 - -0.7 4,689,226 - -0.3 4,689,374 - MPMX20_04485 0.13 -2.5 4,689,374 - MPMX20_04485 0.13 +0.6 4,689,388 + MPMX20_04485 0.15 +0.0 4,689,414 + MPMX20_04485 0.19 -1.8 4,689,450 + MPMX20_04485 0.24 -1.0 4,689,479 + MPMX20_04485 0.28 -1.3 4,689,554 + MPMX20_04485 0.39 -3.3 4,689,617 + MPMX20_04485 0.49 +0.3 4,689,621 + MPMX20_04485 0.49 +0.3 4,689,629 - MPMX20_04485 0.50 -2.3 4,689,654 + MPMX20_04485 0.54 -0.9 4,689,685 - MPMX20_04485 0.59 +0.3 4,689,687 + MPMX20_04485 0.59 -0.3 4,689,687 + MPMX20_04485 0.59 -1.0 4,689,690 - MPMX20_04485 0.59 -2.6 4,689,754 - MPMX20_04485 0.69 -2.6 4,689,754 - MPMX20_04485 0.69 -2.9 4,689,757 + MPMX20_04485 0.69 -1.3 4,689,765 - MPMX20_04485 0.70 -2.1 4,689,775 - MPMX20_04485 0.72 -0.3 4,689,808 - MPMX20_04485 0.77 -1.2 4,689,861 + MPMX20_04485 0.85 -1.0 4,689,861 + MPMX20_04485 0.85 -1.8 4,689,906 - -1.8 4,690,003 - -0.7 4,690,006 + -1.5 4,690,174 - MPMX20_04486 0.17 -0.8 4,690,176 + MPMX20_04486 0.17 -1.7 4,690,184 - MPMX20_04486 0.18 -1.2 4,690,243 + MPMX20_04486 0.22 -1.8 4,690,243 + MPMX20_04486 0.22 -2.4 4,690,243 + MPMX20_04486 0.22 +1.5 4,690,251 - MPMX20_04486 0.23 -1.8
Or see this region's nucleotide sequence