Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02262

Experiment: TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02260 and MPMX20_02261 are separated by 256 nucleotidesMPMX20_02261 and MPMX20_02262 are separated by 58 nucleotidesMPMX20_02262 and MPMX20_02263 are separated by 177 nucleotidesMPMX20_02263 and MPMX20_02264 are separated by 27 nucleotides MPMX20_02260: MPMX20_02260 - Multiple antibiotic resistance protein MarR, at 2,371,453 to 2,371,887 _02260 MPMX20_02261: MPMX20_02261 - hypothetical protein, at 2,372,144 to 2,372,809 _02261 MPMX20_02262: MPMX20_02262 - Sugar efflux transporter, at 2,372,868 to 2,374,064 _02262 MPMX20_02263: MPMX20_02263 - hypothetical protein, at 2,374,242 to 2,375,030 _02263 MPMX20_02264: MPMX20_02264 - hypothetical protein, at 2,375,058 to 2,375,858 _02264 Position (kb) 2372 2373 2374 2375Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 2371.959 kb on + strandat 2371.959 kb on + strandat 2372.043 kb on - strandat 2372.087 kb on - strandat 2372.091 kb on + strandat 2372.093 kb on - strandat 2372.107 kb on - strandat 2372.124 kb on + strandat 2372.132 kb on - strandat 2372.137 kb on - strandat 2372.137 kb on - strandat 2372.152 kb on - strandat 2372.168 kb on + strandat 2372.176 kb on - strandat 2372.177 kb on - strandat 2372.177 kb on - strandat 2372.177 kb on - strandat 2372.197 kb on + strandat 2372.200 kb on - strandat 2372.224 kb on + strand, within MPMX20_02261at 2372.226 kb on + strand, within MPMX20_02261at 2372.234 kb on - strand, within MPMX20_02261at 2372.243 kb on + strand, within MPMX20_02261at 2372.272 kb on + strand, within MPMX20_02261at 2372.288 kb on + strand, within MPMX20_02261at 2372.371 kb on + strand, within MPMX20_02261at 2372.442 kb on + strand, within MPMX20_02261at 2372.454 kb on - strand, within MPMX20_02261at 2372.481 kb on - strand, within MPMX20_02261at 2372.526 kb on + strand, within MPMX20_02261at 2372.585 kb on + strand, within MPMX20_02261at 2372.593 kb on - strand, within MPMX20_02261at 2372.604 kb on + strand, within MPMX20_02261at 2372.671 kb on - strand, within MPMX20_02261at 2372.671 kb on - strand, within MPMX20_02261at 2372.673 kb on + strand, within MPMX20_02261at 2372.673 kb on + strand, within MPMX20_02261at 2372.673 kb on + strand, within MPMX20_02261at 2372.673 kb on + strand, within MPMX20_02261at 2372.673 kb on + strand, within MPMX20_02261at 2372.673 kb on + strand, within MPMX20_02261at 2372.681 kb on - strand, within MPMX20_02261at 2372.681 kb on - strand, within MPMX20_02261at 2372.681 kb on - strand, within MPMX20_02261at 2372.681 kb on - strand, within MPMX20_02261at 2372.712 kb on - strand, within MPMX20_02261at 2372.712 kb on - strand, within MPMX20_02261at 2372.749 kb on + strandat 2372.749 kb on + strandat 2372.749 kb on + strandat 2372.786 kb on - strandat 2372.790 kb on - strandat 2372.791 kb on + strandat 2372.827 kb on - strandat 2372.916 kb on + strandat 2372.926 kb on + strandat 2372.934 kb on - strandat 2372.939 kb on - strandat 2372.965 kb on - strandat 2373.134 kb on + strand, within MPMX20_02262at 2373.139 kb on + strand, within MPMX20_02262at 2373.139 kb on + strand, within MPMX20_02262at 2373.139 kb on + strand, within MPMX20_02262at 2373.139 kb on + strand, within MPMX20_02262at 2373.139 kb on + strand, within MPMX20_02262at 2373.139 kb on + strand, within MPMX20_02262at 2373.139 kb on + strand, within MPMX20_02262at 2373.147 kb on - strand, within MPMX20_02262at 2373.147 kb on - strand, within MPMX20_02262at 2373.147 kb on - strand, within MPMX20_02262at 2373.147 kb on - strand, within MPMX20_02262at 2373.147 kb on - strand, within MPMX20_02262at 2373.147 kb on - strand, within MPMX20_02262at 2373.147 kb on - strand, within MPMX20_02262at 2373.149 kb on + strand, within MPMX20_02262at 2373.149 kb on + strand, within MPMX20_02262at 2373.157 kb on - strand, within MPMX20_02262at 2373.160 kb on + strand, within MPMX20_02262at 2373.190 kb on - strand, within MPMX20_02262at 2373.198 kb on + strand, within MPMX20_02262at 2373.229 kb on + strand, within MPMX20_02262at 2373.237 kb on - strand, within MPMX20_02262at 2373.237 kb on - strand, within MPMX20_02262at 2373.239 kb on + strand, within MPMX20_02262at 2373.239 kb on + strand, within MPMX20_02262at 2373.247 kb on - strand, within MPMX20_02262at 2373.287 kb on - strand, within MPMX20_02262at 2373.365 kb on + strand, within MPMX20_02262at 2373.368 kb on + strand, within MPMX20_02262at 2373.375 kb on + strand, within MPMX20_02262at 2373.383 kb on - strand, within MPMX20_02262at 2373.383 kb on - strand, within MPMX20_02262at 2373.384 kb on + strand, within MPMX20_02262at 2373.384 kb on + strand, within MPMX20_02262at 2373.385 kb on + strand, within MPMX20_02262at 2373.393 kb on - strand, within MPMX20_02262at 2373.606 kb on + strand, within MPMX20_02262at 2373.606 kb on + strand, within MPMX20_02262at 2373.614 kb on - strand, within MPMX20_02262at 2373.614 kb on - strand, within MPMX20_02262at 2373.711 kb on + strand, within MPMX20_02262at 2373.839 kb on + strand, within MPMX20_02262at 2373.857 kb on + strand, within MPMX20_02262at 2373.873 kb on + strand, within MPMX20_02262at 2373.873 kb on + strand, within MPMX20_02262at 2373.895 kb on - strand, within MPMX20_02262at 2373.900 kb on + strand, within MPMX20_02262at 2373.905 kb on + strand, within MPMX20_02262at 2373.905 kb on + strand, within MPMX20_02262at 2373.908 kb on - strand, within MPMX20_02262at 2373.910 kb on + strand, within MPMX20_02262at 2373.913 kb on - strand, within MPMX20_02262at 2373.970 kb on - strandat 2374.043 kb on + strandat 2374.049 kb on - strandat 2374.347 kb on + strand, within MPMX20_02263at 2374.347 kb on - strand, within MPMX20_02263at 2374.357 kb on - strand, within MPMX20_02263at 2374.362 kb on - strand, within MPMX20_02263at 2374.367 kb on + strand, within MPMX20_02263at 2374.424 kb on - strand, within MPMX20_02263at 2374.451 kb on + strand, within MPMX20_02263at 2374.479 kb on + strand, within MPMX20_02263at 2374.487 kb on - strand, within MPMX20_02263at 2374.502 kb on + strand, within MPMX20_02263at 2374.510 kb on - strand, within MPMX20_02263at 2374.555 kb on - strand, within MPMX20_02263at 2374.679 kb on + strand, within MPMX20_02263at 2374.712 kb on + strand, within MPMX20_02263at 2374.845 kb on - strand, within MPMX20_02263at 2374.850 kb on + strand, within MPMX20_02263at 2374.858 kb on - strand, within MPMX20_02263at 2374.919 kb on - strand, within MPMX20_02263at 2374.925 kb on + strand, within MPMX20_02263at 2374.944 kb on + strand, within MPMX20_02263at 2374.944 kb on + strand, within MPMX20_02263at 2374.950 kb on - strand, within MPMX20_02263at 2374.966 kb on - strandat 2374.991 kb on + strandat 2374.992 kb on + strandat 2374.995 kb on - strandat 2375.046 kb on + strandat 2375.056 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,371,959 + -1.3
2,371,959 + +0.0
2,372,043 - -0.1
2,372,087 - +0.0
2,372,091 + -0.1
2,372,093 - +1.5
2,372,107 - -1.0
2,372,124 + -0.8
2,372,132 - -0.7
2,372,137 - +0.7
2,372,137 - -2.0
2,372,152 - +0.9
2,372,168 + -1.5
2,372,176 - -0.5
2,372,177 - +0.1
2,372,177 - -1.0
2,372,177 - -0.7
2,372,197 + -0.5
2,372,200 - -0.7
2,372,224 + MPMX20_02261 0.12 +0.2
2,372,226 + MPMX20_02261 0.12 +0.2
2,372,234 - MPMX20_02261 0.14 +0.3
2,372,243 + MPMX20_02261 0.15 +5.3
2,372,272 + MPMX20_02261 0.19 +0.4
2,372,288 + MPMX20_02261 0.22 -0.8
2,372,371 + MPMX20_02261 0.34 -0.0
2,372,442 + MPMX20_02261 0.45 +0.2
2,372,454 - MPMX20_02261 0.47 -1.5
2,372,481 - MPMX20_02261 0.51 -0.1
2,372,526 + MPMX20_02261 0.57 -1.8
2,372,585 + MPMX20_02261 0.66 +1.0
2,372,593 - MPMX20_02261 0.67 -0.9
2,372,604 + MPMX20_02261 0.69 -0.1
2,372,671 - MPMX20_02261 0.79 -2.4
2,372,671 - MPMX20_02261 0.79 +1.8
2,372,673 + MPMX20_02261 0.79 -0.7
2,372,673 + MPMX20_02261 0.79 -0.8
2,372,673 + MPMX20_02261 0.79 +2.8
2,372,673 + MPMX20_02261 0.79 -0.5
2,372,673 + MPMX20_02261 0.79 -0.8
2,372,673 + MPMX20_02261 0.79 +0.2
2,372,681 - MPMX20_02261 0.81 -0.7
2,372,681 - MPMX20_02261 0.81 +0.2
2,372,681 - MPMX20_02261 0.81 -2.1
2,372,681 - MPMX20_02261 0.81 +0.4
2,372,712 - MPMX20_02261 0.85 -0.1
2,372,712 - MPMX20_02261 0.85 -0.8
2,372,749 + -0.2
2,372,749 + +0.2
2,372,749 + -0.1
2,372,786 - -0.2
2,372,790 - -0.9
2,372,791 + -1.0
2,372,827 - -0.5
2,372,916 + +0.5
2,372,926 + -1.1
2,372,934 - +0.2
2,372,939 - +0.1
2,372,965 - +1.2
2,373,134 + MPMX20_02262 0.22 +0.9
2,373,139 + MPMX20_02262 0.23 +0.0
2,373,139 + MPMX20_02262 0.23 -0.5
2,373,139 + MPMX20_02262 0.23 -0.8
2,373,139 + MPMX20_02262 0.23 -1.9
2,373,139 + MPMX20_02262 0.23 +0.7
2,373,139 + MPMX20_02262 0.23 -1.4
2,373,139 + MPMX20_02262 0.23 -0.9
2,373,147 - MPMX20_02262 0.23 -1.9
2,373,147 - MPMX20_02262 0.23 -2.3
2,373,147 - MPMX20_02262 0.23 +1.0
2,373,147 - MPMX20_02262 0.23 +0.4
2,373,147 - MPMX20_02262 0.23 +1.2
2,373,147 - MPMX20_02262 0.23 -0.0
2,373,147 - MPMX20_02262 0.23 +1.6
2,373,149 + MPMX20_02262 0.23 +0.1
2,373,149 + MPMX20_02262 0.23 +1.0
2,373,157 - MPMX20_02262 0.24 +0.2
2,373,160 + MPMX20_02262 0.24 +0.2
2,373,190 - MPMX20_02262 0.27 +0.5
2,373,198 + MPMX20_02262 0.28 -1.1
2,373,229 + MPMX20_02262 0.30 -0.1
2,373,237 - MPMX20_02262 0.31 +0.9
2,373,237 - MPMX20_02262 0.31 +2.0
2,373,239 + MPMX20_02262 0.31 -0.1
2,373,239 + MPMX20_02262 0.31 -1.1
2,373,247 - MPMX20_02262 0.32 +0.2
2,373,287 - MPMX20_02262 0.35 +0.7
2,373,365 + MPMX20_02262 0.42 -1.9
2,373,368 + MPMX20_02262 0.42 -0.2
2,373,375 + MPMX20_02262 0.42 +0.5
2,373,383 - MPMX20_02262 0.43 -0.4
2,373,383 - MPMX20_02262 0.43 +1.2
2,373,384 + MPMX20_02262 0.43 +2.8
2,373,384 + MPMX20_02262 0.43 +0.9
2,373,385 + MPMX20_02262 0.43 +0.9
2,373,393 - MPMX20_02262 0.44 -1.6
2,373,606 + MPMX20_02262 0.62 +0.2
2,373,606 + MPMX20_02262 0.62 -0.8
2,373,614 - MPMX20_02262 0.62 -0.9
2,373,614 - MPMX20_02262 0.62 -0.6
2,373,711 + MPMX20_02262 0.70 +0.1
2,373,839 + MPMX20_02262 0.81 -0.0
2,373,857 + MPMX20_02262 0.83 -0.2
2,373,873 + MPMX20_02262 0.84 -1.4
2,373,873 + MPMX20_02262 0.84 -0.9
2,373,895 - MPMX20_02262 0.86 -0.5
2,373,900 + MPMX20_02262 0.86 -0.3
2,373,905 + MPMX20_02262 0.87 -1.4
2,373,905 + MPMX20_02262 0.87 -0.4
2,373,908 - MPMX20_02262 0.87 +0.4
2,373,910 + MPMX20_02262 0.87 -0.4
2,373,913 - MPMX20_02262 0.87 +1.2
2,373,970 - +0.6
2,374,043 + +1.2
2,374,049 - -1.1
2,374,347 + MPMX20_02263 0.13 +3.2
2,374,347 - MPMX20_02263 0.13 -0.3
2,374,357 - MPMX20_02263 0.15 -0.6
2,374,362 - MPMX20_02263 0.15 -1.8
2,374,367 + MPMX20_02263 0.16 -0.7
2,374,424 - MPMX20_02263 0.23 -0.0
2,374,451 + MPMX20_02263 0.26 +1.5
2,374,479 + MPMX20_02263 0.30 -0.6
2,374,487 - MPMX20_02263 0.31 -1.1
2,374,502 + MPMX20_02263 0.33 +1.2
2,374,510 - MPMX20_02263 0.34 -1.6
2,374,555 - MPMX20_02263 0.40 -0.0
2,374,679 + MPMX20_02263 0.55 +0.1
2,374,712 + MPMX20_02263 0.60 +0.2
2,374,845 - MPMX20_02263 0.76 -0.6
2,374,850 + MPMX20_02263 0.77 -0.2
2,374,858 - MPMX20_02263 0.78 +1.0
2,374,919 - MPMX20_02263 0.86 -1.0
2,374,925 + MPMX20_02263 0.87 -0.7
2,374,944 + MPMX20_02263 0.89 +0.1
2,374,944 + MPMX20_02263 0.89 +0.7
2,374,950 - MPMX20_02263 0.90 +0.0
2,374,966 - -0.3
2,374,991 + -1.3
2,374,992 + +1.2
2,374,995 - -0.3
2,375,046 + +0.1
2,375,056 - -1.4

Or see this region's nucleotide sequence