Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03803

Experiment: M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03801 and MPMX20_03802 are separated by 58 nucleotidesMPMX20_03802 and MPMX20_03803 are separated by 94 nucleotidesMPMX20_03803 and MPMX20_03804 are separated by 52 nucleotidesMPMX20_03804 and MPMX20_03805 are separated by 39 nucleotides MPMX20_03801: MPMX20_03801 - Galactose-proton symporter, at 4,007,902 to 4,009,299 _03801 MPMX20_03802: MPMX20_03802 - Protein SprT, at 4,009,358 to 4,009,855 _03802 MPMX20_03803: MPMX20_03803 - Endonuclease-1, at 4,009,950 to 4,010,657 _03803 MPMX20_03804: MPMX20_03804 - Ribosomal RNA small subunit methyltransferase E, at 4,010,710 to 4,011,441 _03804 MPMX20_03805: MPMX20_03805 - Glutathione synthetase, at 4,011,481 to 4,012,428 _03805 Position (kb) 4009 4010 4011Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4008.956 kb on - strand, within MPMX20_03801at 4008.956 kb on - strand, within MPMX20_03801at 4008.956 kb on - strand, within MPMX20_03801at 4008.962 kb on + strand, within MPMX20_03801at 4008.977 kb on - strand, within MPMX20_03801at 4009.013 kb on + strand, within MPMX20_03801at 4009.065 kb on + strand, within MPMX20_03801at 4009.070 kb on + strand, within MPMX20_03801at 4009.073 kb on - strand, within MPMX20_03801at 4009.078 kb on - strand, within MPMX20_03801at 4009.136 kb on - strand, within MPMX20_03801at 4009.154 kb on + strand, within MPMX20_03801at 4009.162 kb on - strandat 4009.162 kb on - strandat 4009.166 kb on + strandat 4009.166 kb on + strandat 4009.200 kb on - strandat 4009.286 kb on + strandat 4009.323 kb on + strandat 4009.326 kb on - strandat 4009.334 kb on - strandat 4009.424 kb on + strand, within MPMX20_03802at 4009.435 kb on + strand, within MPMX20_03802at 4009.450 kb on + strand, within MPMX20_03802at 4009.450 kb on + strand, within MPMX20_03802at 4009.458 kb on - strand, within MPMX20_03802at 4009.458 kb on - strand, within MPMX20_03802at 4009.458 kb on - strand, within MPMX20_03802at 4009.458 kb on - strand, within MPMX20_03802at 4009.458 kb on - strand, within MPMX20_03802at 4009.458 kb on - strand, within MPMX20_03802at 4009.458 kb on - strand, within MPMX20_03802at 4009.458 kb on - strand, within MPMX20_03802at 4009.458 kb on - strand, within MPMX20_03802at 4009.538 kb on - strand, within MPMX20_03802at 4009.588 kb on + strand, within MPMX20_03802at 4009.619 kb on + strand, within MPMX20_03802at 4009.681 kb on - strand, within MPMX20_03802at 4009.733 kb on + strand, within MPMX20_03802at 4009.734 kb on - strand, within MPMX20_03802at 4009.762 kb on + strand, within MPMX20_03802at 4009.830 kb on + strandat 4009.943 kb on + strandat 4009.943 kb on + strandat 4009.995 kb on + strandat 4010.014 kb on - strandat 4010.015 kb on - strandat 4010.020 kb on + strandat 4010.061 kb on - strand, within MPMX20_03803at 4010.073 kb on - strand, within MPMX20_03803at 4010.149 kb on + strand, within MPMX20_03803at 4010.149 kb on + strand, within MPMX20_03803at 4010.149 kb on + strand, within MPMX20_03803at 4010.149 kb on + strand, within MPMX20_03803at 4010.149 kb on + strand, within MPMX20_03803at 4010.149 kb on + strand, within MPMX20_03803at 4010.157 kb on - strand, within MPMX20_03803at 4010.157 kb on - strand, within MPMX20_03803at 4010.157 kb on - strand, within MPMX20_03803at 4010.157 kb on - strand, within MPMX20_03803at 4010.157 kb on - strand, within MPMX20_03803at 4010.157 kb on - strand, within MPMX20_03803at 4010.203 kb on - strand, within MPMX20_03803at 4010.341 kb on - strand, within MPMX20_03803at 4010.494 kb on + strand, within MPMX20_03803at 4010.500 kb on + strand, within MPMX20_03803at 4010.501 kb on + strand, within MPMX20_03803at 4010.531 kb on + strand, within MPMX20_03803at 4010.531 kb on + strand, within MPMX20_03803at 4010.531 kb on + strand, within MPMX20_03803at 4010.606 kb on + strandat 4010.610 kb on + strandat 4010.612 kb on + strandat 4010.618 kb on + strandat 4010.656 kb on + strandat 4010.664 kb on - strandat 4010.727 kb on + strandat 4010.732 kb on + strandat 4010.735 kb on - strandat 4010.740 kb on - strandat 4010.740 kb on - strandat 4010.740 kb on - strandat 4010.740 kb on - strandat 4010.767 kb on - strandat 4010.767 kb on - strandat 4010.824 kb on + strand, within MPMX20_03804at 4010.851 kb on - strand, within MPMX20_03804at 4010.945 kb on + strand, within MPMX20_03804at 4010.960 kb on + strand, within MPMX20_03804at 4011.015 kb on + strand, within MPMX20_03804at 4011.017 kb on + strand, within MPMX20_03804at 4011.122 kb on + strand, within MPMX20_03804at 4011.130 kb on - strand, within MPMX20_03804at 4011.135 kb on - strand, within MPMX20_03804at 4011.218 kb on + strand, within MPMX20_03804at 4011.221 kb on - strand, within MPMX20_03804at 4011.221 kb on - strand, within MPMX20_03804at 4011.442 kb on + strandat 4011.450 kb on - strandat 4011.450 kb on - strandat 4011.489 kb on + strandat 4011.499 kb on + strandat 4011.519 kb on + strandat 4011.527 kb on - strandat 4011.527 kb on - strandat 4011.555 kb on + strandat 4011.563 kb on - strandat 4011.563 kb on - strandat 4011.575 kb on + strandat 4011.590 kb on + strand, within MPMX20_03805at 4011.590 kb on + strand, within MPMX20_03805at 4011.590 kb on + strand, within MPMX20_03805at 4011.613 kb on - strand, within MPMX20_03805at 4011.613 kb on - strand, within MPMX20_03805

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,008,956 - MPMX20_03801 0.75 -2.6
4,008,956 - MPMX20_03801 0.75 -0.0
4,008,956 - MPMX20_03801 0.75 +0.0
4,008,962 + MPMX20_03801 0.76 +0.1
4,008,977 - MPMX20_03801 0.77 -0.9
4,009,013 + MPMX20_03801 0.79 -0.6
4,009,065 + MPMX20_03801 0.83 +0.8
4,009,070 + MPMX20_03801 0.84 +0.8
4,009,073 - MPMX20_03801 0.84 -2.5
4,009,078 - MPMX20_03801 0.84 +1.0
4,009,136 - MPMX20_03801 0.88 +0.5
4,009,154 + MPMX20_03801 0.90 +1.5
4,009,162 - -0.2
4,009,162 - +0.1
4,009,166 + +0.6
4,009,166 + -1.3
4,009,200 - -0.6
4,009,286 + +3.4
4,009,323 + -0.5
4,009,326 - -1.7
4,009,334 - +0.5
4,009,424 + MPMX20_03802 0.13 -1.3
4,009,435 + MPMX20_03802 0.15 -3.2
4,009,450 + MPMX20_03802 0.18 +1.0
4,009,450 + MPMX20_03802 0.18 -1.5
4,009,458 - MPMX20_03802 0.20 +1.3
4,009,458 - MPMX20_03802 0.20 -3.0
4,009,458 - MPMX20_03802 0.20 -1.9
4,009,458 - MPMX20_03802 0.20 +1.5
4,009,458 - MPMX20_03802 0.20 -2.0
4,009,458 - MPMX20_03802 0.20 -1.4
4,009,458 - MPMX20_03802 0.20 +1.9
4,009,458 - MPMX20_03802 0.20 +3.7
4,009,458 - MPMX20_03802 0.20 -0.5
4,009,538 - MPMX20_03802 0.36 -2.0
4,009,588 + MPMX20_03802 0.46 +0.7
4,009,619 + MPMX20_03802 0.52 +0.4
4,009,681 - MPMX20_03802 0.65 -1.7
4,009,733 + MPMX20_03802 0.75 -0.3
4,009,734 - MPMX20_03802 0.76 +0.5
4,009,762 + MPMX20_03802 0.81 +1.0
4,009,830 + -1.9
4,009,943 + +0.5
4,009,943 + -1.9
4,009,995 + -1.2
4,010,014 - +0.5
4,010,015 - +0.8
4,010,020 + +0.9
4,010,061 - MPMX20_03803 0.16 -1.9
4,010,073 - MPMX20_03803 0.17 -3.4
4,010,149 + MPMX20_03803 0.28 -0.0
4,010,149 + MPMX20_03803 0.28 +1.9
4,010,149 + MPMX20_03803 0.28 +1.5
4,010,149 + MPMX20_03803 0.28 -0.9
4,010,149 + MPMX20_03803 0.28 -2.2
4,010,149 + MPMX20_03803 0.28 -1.9
4,010,157 - MPMX20_03803 0.29 +0.5
4,010,157 - MPMX20_03803 0.29 -1.1
4,010,157 - MPMX20_03803 0.29 -0.5
4,010,157 - MPMX20_03803 0.29 -1.3
4,010,157 - MPMX20_03803 0.29 +0.7
4,010,157 - MPMX20_03803 0.29 -0.4
4,010,203 - MPMX20_03803 0.36 -4.3
4,010,341 - MPMX20_03803 0.55 -2.7
4,010,494 + MPMX20_03803 0.77 +1.0
4,010,500 + MPMX20_03803 0.78 -0.2
4,010,501 + MPMX20_03803 0.78 -2.8
4,010,531 + MPMX20_03803 0.82 +0.1
4,010,531 + MPMX20_03803 0.82 -0.0
4,010,531 + MPMX20_03803 0.82 -0.5
4,010,606 + -0.8
4,010,610 + -1.5
4,010,612 + -4.0
4,010,618 + -2.1
4,010,656 + +0.9
4,010,664 - +0.0
4,010,727 + -1.3
4,010,732 + -0.8
4,010,735 - -0.1
4,010,740 - +0.7
4,010,740 - -3.2
4,010,740 - -0.1
4,010,740 - +0.6
4,010,767 - -2.7
4,010,767 - -0.1
4,010,824 + MPMX20_03804 0.16 -1.5
4,010,851 - MPMX20_03804 0.19 -1.8
4,010,945 + MPMX20_03804 0.32 +2.0
4,010,960 + MPMX20_03804 0.34 +0.9
4,011,015 + MPMX20_03804 0.42 +1.9
4,011,017 + MPMX20_03804 0.42 +0.0
4,011,122 + MPMX20_03804 0.56 -4.0
4,011,130 - MPMX20_03804 0.57 +1.2
4,011,135 - MPMX20_03804 0.58 -0.1
4,011,218 + MPMX20_03804 0.69 +0.2
4,011,221 - MPMX20_03804 0.70 -2.5
4,011,221 - MPMX20_03804 0.70 -0.7
4,011,442 + +0.1
4,011,450 - -2.9
4,011,450 - +1.1
4,011,489 + -0.1
4,011,499 + +1.9
4,011,519 + -2.4
4,011,527 - -0.0
4,011,527 - +0.8
4,011,555 + +0.5
4,011,563 - -0.8
4,011,563 - -0.8
4,011,575 + -1.0
4,011,590 + MPMX20_03805 0.11 -2.9
4,011,590 + MPMX20_03805 0.11 -0.5
4,011,590 + MPMX20_03805 0.11 -4.0
4,011,613 - MPMX20_03805 0.14 -0.1
4,011,613 - MPMX20_03805 0.14 +1.9

Or see this region's nucleotide sequence