Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00523

Experiment: M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00521 and MPMX20_00522 are separated by 22 nucleotidesMPMX20_00522 and MPMX20_00523 are separated by 13 nucleotidesMPMX20_00523 and MPMX20_00524 are separated by 42 nucleotides MPMX20_00521: MPMX20_00521 - hypothetical protein, at 537,915 to 538,214 _00521 MPMX20_00522: MPMX20_00522 - hypothetical protein, at 538,237 to 539,013 _00522 MPMX20_00523: MPMX20_00523 - hypothetical protein, at 539,027 to 539,668 _00523 MPMX20_00524: MPMX20_00524 - Deacetylase, at 539,711 to 540,844 _00524 Position (kb) 539 540Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 538.055 kb on + strand, within MPMX20_00521at 538.155 kb on - strand, within MPMX20_00521at 538.188 kb on - strandat 538.230 kb on - strandat 538.338 kb on + strand, within MPMX20_00522at 538.338 kb on + strand, within MPMX20_00522at 538.338 kb on + strand, within MPMX20_00522at 538.338 kb on + strand, within MPMX20_00522at 538.338 kb on + strand, within MPMX20_00522at 538.338 kb on + strand, within MPMX20_00522at 538.338 kb on + strand, within MPMX20_00522at 538.338 kb on + strand, within MPMX20_00522at 538.346 kb on - strand, within MPMX20_00522at 538.346 kb on - strand, within MPMX20_00522at 538.401 kb on + strand, within MPMX20_00522at 538.414 kb on - strand, within MPMX20_00522at 538.414 kb on - strand, within MPMX20_00522at 538.458 kb on + strand, within MPMX20_00522at 538.472 kb on + strand, within MPMX20_00522at 538.480 kb on - strand, within MPMX20_00522at 538.513 kb on - strand, within MPMX20_00522at 538.538 kb on + strand, within MPMX20_00522at 538.615 kb on - strand, within MPMX20_00522at 538.615 kb on - strand, within MPMX20_00522at 538.615 kb on - strand, within MPMX20_00522at 538.640 kb on + strand, within MPMX20_00522at 538.642 kb on + strand, within MPMX20_00522at 538.671 kb on - strand, within MPMX20_00522at 538.775 kb on + strand, within MPMX20_00522at 538.778 kb on + strand, within MPMX20_00522at 538.794 kb on + strand, within MPMX20_00522at 538.841 kb on + strand, within MPMX20_00522at 538.855 kb on + strand, within MPMX20_00522at 538.910 kb on - strand, within MPMX20_00522at 538.982 kb on + strandat 539.043 kb on - strandat 539.043 kb on - strandat 539.076 kb on + strandat 539.086 kb on + strandat 539.089 kb on - strandat 539.094 kb on - strand, within MPMX20_00523at 539.097 kb on - strand, within MPMX20_00523at 539.141 kb on - strand, within MPMX20_00523at 539.143 kb on + strand, within MPMX20_00523at 539.260 kb on + strand, within MPMX20_00523at 539.296 kb on - strand, within MPMX20_00523at 539.296 kb on - strand, within MPMX20_00523at 539.449 kb on - strand, within MPMX20_00523at 539.481 kb on - strand, within MPMX20_00523at 539.570 kb on - strand, within MPMX20_00523at 539.574 kb on - strand, within MPMX20_00523at 539.643 kb on - strandat 539.644 kb on - strandat 539.650 kb on + strandat 539.654 kb on - strandat 539.694 kb on - strandat 539.694 kb on - strandat 539.723 kb on + strandat 539.723 kb on + strandat 539.723 kb on + strandat 539.731 kb on - strandat 539.731 kb on - strandat 539.756 kb on - strandat 539.761 kb on - strandat 539.841 kb on - strand, within MPMX20_00524at 539.848 kb on - strand, within MPMX20_00524at 539.854 kb on - strand, within MPMX20_00524at 539.873 kb on - strand, within MPMX20_00524at 539.873 kb on - strand, within MPMX20_00524at 539.879 kb on + strand, within MPMX20_00524at 539.923 kb on - strand, within MPMX20_00524at 540.017 kb on + strand, within MPMX20_00524at 540.035 kb on + strand, within MPMX20_00524at 540.037 kb on - strand, within MPMX20_00524at 540.048 kb on + strand, within MPMX20_00524at 540.068 kb on + strand, within MPMX20_00524at 540.076 kb on - strand, within MPMX20_00524at 540.124 kb on - strand, within MPMX20_00524at 540.195 kb on + strand, within MPMX20_00524at 540.307 kb on - strand, within MPMX20_00524at 540.309 kb on + strand, within MPMX20_00524at 540.309 kb on + strand, within MPMX20_00524at 540.309 kb on + strand, within MPMX20_00524at 540.309 kb on + strand, within MPMX20_00524at 540.314 kb on + strand, within MPMX20_00524at 540.314 kb on + strand, within MPMX20_00524at 540.317 kb on - strand, within MPMX20_00524at 540.317 kb on - strand, within MPMX20_00524at 540.317 kb on - strand, within MPMX20_00524at 540.386 kb on + strand, within MPMX20_00524at 540.479 kb on - strand, within MPMX20_00524at 540.512 kb on - strand, within MPMX20_00524

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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538,055 + MPMX20_00521 0.47 -0.7
538,155 - MPMX20_00521 0.80 +1.1
538,188 - +0.7
538,230 - +0.1
538,338 + MPMX20_00522 0.13 -1.7
538,338 + MPMX20_00522 0.13 +1.4
538,338 + MPMX20_00522 0.13 -0.3
538,338 + MPMX20_00522 0.13 +0.4
538,338 + MPMX20_00522 0.13 -0.5
538,338 + MPMX20_00522 0.13 +0.5
538,338 + MPMX20_00522 0.13 -2.0
538,338 + MPMX20_00522 0.13 -3.3
538,346 - MPMX20_00522 0.14 -0.6
538,346 - MPMX20_00522 0.14 -0.2
538,401 + MPMX20_00522 0.21 +0.8
538,414 - MPMX20_00522 0.23 -1.6
538,414 - MPMX20_00522 0.23 +0.1
538,458 + MPMX20_00522 0.28 -0.3
538,472 + MPMX20_00522 0.30 +0.6
538,480 - MPMX20_00522 0.31 -1.2
538,513 - MPMX20_00522 0.36 -3.5
538,538 + MPMX20_00522 0.39 -0.9
538,615 - MPMX20_00522 0.49 +1.4
538,615 - MPMX20_00522 0.49 -1.9
538,615 - MPMX20_00522 0.49 -1.6
538,640 + MPMX20_00522 0.52 -0.2
538,642 + MPMX20_00522 0.52 -1.7
538,671 - MPMX20_00522 0.56 -0.3
538,775 + MPMX20_00522 0.69 -1.1
538,778 + MPMX20_00522 0.70 -0.2
538,794 + MPMX20_00522 0.72 +1.2
538,841 + MPMX20_00522 0.78 -0.8
538,855 + MPMX20_00522 0.80 -2.7
538,910 - MPMX20_00522 0.87 +1.7
538,982 + +1.5
539,043 - +1.4
539,043 - -0.2
539,076 + -2.2
539,086 + -1.1
539,089 - -1.7
539,094 - MPMX20_00523 0.10 +3.1
539,097 - MPMX20_00523 0.11 +3.2
539,141 - MPMX20_00523 0.18 +0.6
539,143 + MPMX20_00523 0.18 -2.7
539,260 + MPMX20_00523 0.36 +1.4
539,296 - MPMX20_00523 0.42 +4.2
539,296 - MPMX20_00523 0.42 -0.6
539,449 - MPMX20_00523 0.66 -2.2
539,481 - MPMX20_00523 0.71 +0.4
539,570 - MPMX20_00523 0.85 +0.2
539,574 - MPMX20_00523 0.85 -0.2
539,643 - +1.6
539,644 - -4.2
539,650 + -1.6
539,654 - +2.4
539,694 - +0.1
539,694 - -1.2
539,723 + -2.2
539,723 + +0.4
539,723 + -0.9
539,731 - -0.2
539,731 - -1.7
539,756 - -0.9
539,761 - -0.7
539,841 - MPMX20_00524 0.11 -1.6
539,848 - MPMX20_00524 0.12 -2.2
539,854 - MPMX20_00524 0.13 +0.8
539,873 - MPMX20_00524 0.14 -1.7
539,873 - MPMX20_00524 0.14 -2.7
539,879 + MPMX20_00524 0.15 -0.9
539,923 - MPMX20_00524 0.19 -1.9
540,017 + MPMX20_00524 0.27 -3.7
540,035 + MPMX20_00524 0.29 +0.0
540,037 - MPMX20_00524 0.29 -0.1
540,048 + MPMX20_00524 0.30 -1.4
540,068 + MPMX20_00524 0.31 -1.7
540,076 - MPMX20_00524 0.32 -1.2
540,124 - MPMX20_00524 0.36 +1.6
540,195 + MPMX20_00524 0.43 -2.4
540,307 - MPMX20_00524 0.53 -0.1
540,309 + MPMX20_00524 0.53 -2.7
540,309 + MPMX20_00524 0.53 -1.0
540,309 + MPMX20_00524 0.53 -3.9
540,309 + MPMX20_00524 0.53 +1.7
540,314 + MPMX20_00524 0.53 -3.2
540,314 + MPMX20_00524 0.53 +0.6
540,317 - MPMX20_00524 0.53 +0.3
540,317 - MPMX20_00524 0.53 +0.4
540,317 - MPMX20_00524 0.53 -0.3
540,386 + MPMX20_00524 0.60 -1.9
540,479 - MPMX20_00524 0.68 -3.2
540,512 - MPMX20_00524 0.71 +0.5

Or see this region's nucleotide sequence