Experiment: 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03813 and MPMX20_03814 are separated by 63 nucleotides MPMX20_03814 and MPMX20_03815 are separated by 61 nucleotides MPMX20_03815 and MPMX20_03816 are separated by 56 nucleotides
MPMX20_03813: MPMX20_03813 - Heme chaperone HemW, at 4,016,672 to 4,017,814
_03813
MPMX20_03814: MPMX20_03814 - hypothetical protein, at 4,017,878 to 4,018,240
_03814
MPMX20_03815: MPMX20_03815 - hypothetical protein, at 4,018,302 to 4,019,018
_03815
MPMX20_03816: MPMX20_03816 - hypothetical protein, at 4,019,075 to 4,019,401
_03816
Position (kb)
4017
4018
4019 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4017.020 kb on + strand, within MPMX20_03813 at 4017.020 kb on + strand, within MPMX20_03813 at 4017.028 kb on - strand, within MPMX20_03813 at 4017.044 kb on + strand, within MPMX20_03813 at 4017.052 kb on - strand, within MPMX20_03813 at 4017.059 kb on - strand, within MPMX20_03813 at 4017.093 kb on + strand, within MPMX20_03813 at 4017.101 kb on - strand, within MPMX20_03813 at 4017.101 kb on - strand, within MPMX20_03813 at 4017.131 kb on + strand, within MPMX20_03813 at 4017.132 kb on + strand, within MPMX20_03813 at 4017.137 kb on + strand, within MPMX20_03813 at 4017.140 kb on - strand, within MPMX20_03813 at 4017.140 kb on - strand, within MPMX20_03813 at 4017.140 kb on - strand, within MPMX20_03813 at 4017.140 kb on - strand, within MPMX20_03813 at 4017.241 kb on + strand, within MPMX20_03813 at 4017.242 kb on - strand, within MPMX20_03813 at 4017.257 kb on - strand, within MPMX20_03813 at 4017.338 kb on - strand, within MPMX20_03813 at 4017.342 kb on + strand, within MPMX20_03813 at 4017.366 kb on + strand, within MPMX20_03813 at 4017.483 kb on - strand, within MPMX20_03813 at 4017.489 kb on + strand, within MPMX20_03813 at 4017.497 kb on - strand, within MPMX20_03813 at 4017.497 kb on - strand, within MPMX20_03813 at 4017.550 kb on + strand, within MPMX20_03813 at 4017.555 kb on + strand, within MPMX20_03813 at 4017.555 kb on + strand, within MPMX20_03813 at 4017.563 kb on - strand, within MPMX20_03813 at 4017.640 kb on - strand, within MPMX20_03813 at 4017.670 kb on + strand, within MPMX20_03813 at 4017.868 kb on - strand at 4017.870 kb on + strand at 4017.870 kb on + strand at 4017.872 kb on - strand at 4017.878 kb on - strand at 4017.881 kb on + strand at 4017.907 kb on + strand at 4017.958 kb on - strand, within MPMX20_03814 at 4017.999 kb on - strand, within MPMX20_03814 at 4018.110 kb on + strand, within MPMX20_03814 at 4018.112 kb on - strand, within MPMX20_03814 at 4018.217 kb on + strand at 4018.217 kb on + strand at 4018.224 kb on - strand at 4018.225 kb on - strand at 4018.247 kb on - strand at 4018.256 kb on + strand at 4018.279 kb on - strand at 4018.279 kb on - strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.285 kb on + strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.292 kb on - strand at 4018.312 kb on + strand at 4018.434 kb on + strand, within MPMX20_03815 at 4018.434 kb on + strand, within MPMX20_03815 at 4018.443 kb on + strand, within MPMX20_03815 at 4018.482 kb on - strand, within MPMX20_03815 at 4018.486 kb on + strand, within MPMX20_03815 at 4018.494 kb on - strand, within MPMX20_03815 at 4018.502 kb on + strand, within MPMX20_03815 at 4018.502 kb on + strand, within MPMX20_03815 at 4018.569 kb on - strand, within MPMX20_03815 at 4018.573 kb on - strand, within MPMX20_03815 at 4018.648 kb on + strand, within MPMX20_03815 at 4018.654 kb on + strand, within MPMX20_03815 at 4018.694 kb on + strand, within MPMX20_03815 at 4018.751 kb on - strand, within MPMX20_03815 at 4018.756 kb on - strand, within MPMX20_03815 at 4018.770 kb on - strand, within MPMX20_03815 at 4018.825 kb on - strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.902 kb on - strand, within MPMX20_03815 at 4018.902 kb on - strand, within MPMX20_03815 at 4018.959 kb on - strand at 4018.959 kb on - strand at 4019.048 kb on + strand at 4019.056 kb on - strand at 4019.190 kb on + strand, within MPMX20_03816 at 4019.193 kb on - strand, within MPMX20_03816 at 4019.195 kb on + strand, within MPMX20_03816 at 4019.195 kb on + strand, within MPMX20_03816 at 4019.202 kb on - strand, within MPMX20_03816 at 4019.203 kb on - strand, within MPMX20_03816 at 4019.203 kb on - strand, within MPMX20_03816 at 4019.203 kb on - strand, within MPMX20_03816
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,017,020 + MPMX20_03813 0.30 -3.4 4,017,020 + MPMX20_03813 0.30 +0.4 4,017,028 - MPMX20_03813 0.31 +0.4 4,017,044 + MPMX20_03813 0.33 -2.4 4,017,052 - MPMX20_03813 0.33 -1.4 4,017,059 - MPMX20_03813 0.34 +0.1 4,017,093 + MPMX20_03813 0.37 +1.1 4,017,101 - MPMX20_03813 0.38 -0.7 4,017,101 - MPMX20_03813 0.38 +0.3 4,017,131 + MPMX20_03813 0.40 -1.3 4,017,132 + MPMX20_03813 0.40 -1.5 4,017,137 + MPMX20_03813 0.41 -2.4 4,017,140 - MPMX20_03813 0.41 -1.5 4,017,140 - MPMX20_03813 0.41 -0.7 4,017,140 - MPMX20_03813 0.41 -0.3 4,017,140 - MPMX20_03813 0.41 +0.5 4,017,241 + MPMX20_03813 0.50 -0.5 4,017,242 - MPMX20_03813 0.50 -1.1 4,017,257 - MPMX20_03813 0.51 +0.0 4,017,338 - MPMX20_03813 0.58 -1.6 4,017,342 + MPMX20_03813 0.59 -0.3 4,017,366 + MPMX20_03813 0.61 -1.1 4,017,483 - MPMX20_03813 0.71 -2.1 4,017,489 + MPMX20_03813 0.71 +1.3 4,017,497 - MPMX20_03813 0.72 +0.3 4,017,497 - MPMX20_03813 0.72 -3.5 4,017,550 + MPMX20_03813 0.77 +1.9 4,017,555 + MPMX20_03813 0.77 +0.5 4,017,555 + MPMX20_03813 0.77 +3.6 4,017,563 - MPMX20_03813 0.78 -0.3 4,017,640 - MPMX20_03813 0.85 -0.1 4,017,670 + MPMX20_03813 0.87 -2.5 4,017,868 - -0.3 4,017,870 + +0.3 4,017,870 + -0.2 4,017,872 - -0.5 4,017,878 - -0.3 4,017,881 + +0.0 4,017,907 + -1.1 4,017,958 - MPMX20_03814 0.22 -1.0 4,017,999 - MPMX20_03814 0.33 -1.2 4,018,110 + MPMX20_03814 0.64 -1.1 4,018,112 - MPMX20_03814 0.64 +1.0 4,018,217 + +0.1 4,018,217 + +0.3 4,018,224 - -0.5 4,018,225 - +0.5 4,018,247 - -0.5 4,018,256 + +0.3 4,018,279 - -0.8 4,018,279 - -1.3 4,018,283 + -0.5 4,018,283 + -0.5 4,018,283 + -1.1 4,018,283 + -1.1 4,018,283 + +0.3 4,018,283 + +0.4 4,018,283 + +0.1 4,018,283 + -1.2 4,018,283 + +0.6 4,018,285 + +0.0 4,018,291 - -0.6 4,018,291 - +1.1 4,018,291 - -2.8 4,018,291 - -0.8 4,018,291 - -0.3 4,018,291 - -0.2 4,018,292 - -1.3 4,018,312 + +1.4 4,018,434 + MPMX20_03815 0.18 -0.1 4,018,434 + MPMX20_03815 0.18 -2.5 4,018,443 + MPMX20_03815 0.20 +1.7 4,018,482 - MPMX20_03815 0.25 -1.0 4,018,486 + MPMX20_03815 0.26 -0.9 4,018,494 - MPMX20_03815 0.27 +0.3 4,018,502 + MPMX20_03815 0.28 +0.3 4,018,502 + MPMX20_03815 0.28 -0.5 4,018,569 - MPMX20_03815 0.37 -0.4 4,018,573 - MPMX20_03815 0.38 -1.1 4,018,648 + MPMX20_03815 0.48 -2.1 4,018,654 + MPMX20_03815 0.49 +0.1 4,018,694 + MPMX20_03815 0.55 +1.3 4,018,751 - MPMX20_03815 0.63 -0.4 4,018,756 - MPMX20_03815 0.63 -0.7 4,018,770 - MPMX20_03815 0.65 +1.3 4,018,825 - MPMX20_03815 0.73 +1.3 4,018,894 + MPMX20_03815 0.83 +1.0 4,018,894 + MPMX20_03815 0.83 -1.2 4,018,894 + MPMX20_03815 0.83 +0.2 4,018,894 + MPMX20_03815 0.83 -0.8 4,018,894 + MPMX20_03815 0.83 -0.6 4,018,894 + MPMX20_03815 0.83 +0.2 4,018,894 + MPMX20_03815 0.83 +1.8 4,018,894 + MPMX20_03815 0.83 -1.5 4,018,902 - MPMX20_03815 0.84 -2.3 4,018,902 - MPMX20_03815 0.84 -2.5 4,018,959 - -0.7 4,018,959 - +0.3 4,019,048 + -0.5 4,019,056 - -2.2 4,019,190 + MPMX20_03816 0.35 -2.2 4,019,193 - MPMX20_03816 0.36 -0.1 4,019,195 + MPMX20_03816 0.37 -1.5 4,019,195 + MPMX20_03816 0.37 -1.3 4,019,202 - MPMX20_03816 0.39 -1.1 4,019,203 - MPMX20_03816 0.39 -1.7 4,019,203 - MPMX20_03816 0.39 -0.4 4,019,203 - MPMX20_03816 0.39 -1.9
Or see this region's nucleotide sequence