Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03814

Experiment: 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03813 and MPMX20_03814 are separated by 63 nucleotidesMPMX20_03814 and MPMX20_03815 are separated by 61 nucleotidesMPMX20_03815 and MPMX20_03816 are separated by 56 nucleotides MPMX20_03813: MPMX20_03813 - Heme chaperone HemW, at 4,016,672 to 4,017,814 _03813 MPMX20_03814: MPMX20_03814 - hypothetical protein, at 4,017,878 to 4,018,240 _03814 MPMX20_03815: MPMX20_03815 - hypothetical protein, at 4,018,302 to 4,019,018 _03815 MPMX20_03816: MPMX20_03816 - hypothetical protein, at 4,019,075 to 4,019,401 _03816 Position (kb) 4017 4018 4019Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4017.020 kb on + strand, within MPMX20_03813at 4017.020 kb on + strand, within MPMX20_03813at 4017.028 kb on - strand, within MPMX20_03813at 4017.044 kb on + strand, within MPMX20_03813at 4017.052 kb on - strand, within MPMX20_03813at 4017.059 kb on - strand, within MPMX20_03813at 4017.093 kb on + strand, within MPMX20_03813at 4017.101 kb on - strand, within MPMX20_03813at 4017.101 kb on - strand, within MPMX20_03813at 4017.131 kb on + strand, within MPMX20_03813at 4017.132 kb on + strand, within MPMX20_03813at 4017.137 kb on + strand, within MPMX20_03813at 4017.140 kb on - strand, within MPMX20_03813at 4017.140 kb on - strand, within MPMX20_03813at 4017.140 kb on - strand, within MPMX20_03813at 4017.140 kb on - strand, within MPMX20_03813at 4017.241 kb on + strand, within MPMX20_03813at 4017.242 kb on - strand, within MPMX20_03813at 4017.257 kb on - strand, within MPMX20_03813at 4017.338 kb on - strand, within MPMX20_03813at 4017.342 kb on + strand, within MPMX20_03813at 4017.366 kb on + strand, within MPMX20_03813at 4017.483 kb on - strand, within MPMX20_03813at 4017.489 kb on + strand, within MPMX20_03813at 4017.497 kb on - strand, within MPMX20_03813at 4017.497 kb on - strand, within MPMX20_03813at 4017.550 kb on + strand, within MPMX20_03813at 4017.555 kb on + strand, within MPMX20_03813at 4017.555 kb on + strand, within MPMX20_03813at 4017.563 kb on - strand, within MPMX20_03813at 4017.640 kb on - strand, within MPMX20_03813at 4017.670 kb on + strand, within MPMX20_03813at 4017.868 kb on - strandat 4017.870 kb on + strandat 4017.870 kb on + strandat 4017.872 kb on - strandat 4017.878 kb on - strandat 4017.881 kb on + strandat 4017.907 kb on + strandat 4017.958 kb on - strand, within MPMX20_03814at 4017.999 kb on - strand, within MPMX20_03814at 4018.110 kb on + strand, within MPMX20_03814at 4018.112 kb on - strand, within MPMX20_03814at 4018.217 kb on + strandat 4018.217 kb on + strandat 4018.224 kb on - strandat 4018.225 kb on - strandat 4018.247 kb on - strandat 4018.256 kb on + strandat 4018.279 kb on - strandat 4018.279 kb on - strandat 4018.283 kb on + strandat 4018.283 kb on + strandat 4018.283 kb on + strandat 4018.283 kb on + strandat 4018.283 kb on + strandat 4018.283 kb on + strandat 4018.283 kb on + strandat 4018.283 kb on + strandat 4018.283 kb on + strandat 4018.285 kb on + strandat 4018.291 kb on - strandat 4018.291 kb on - strandat 4018.291 kb on - strandat 4018.291 kb on - strandat 4018.291 kb on - strandat 4018.291 kb on - strandat 4018.292 kb on - strandat 4018.312 kb on + strandat 4018.434 kb on + strand, within MPMX20_03815at 4018.434 kb on + strand, within MPMX20_03815at 4018.443 kb on + strand, within MPMX20_03815at 4018.482 kb on - strand, within MPMX20_03815at 4018.486 kb on + strand, within MPMX20_03815at 4018.494 kb on - strand, within MPMX20_03815at 4018.502 kb on + strand, within MPMX20_03815at 4018.502 kb on + strand, within MPMX20_03815at 4018.569 kb on - strand, within MPMX20_03815at 4018.573 kb on - strand, within MPMX20_03815at 4018.648 kb on + strand, within MPMX20_03815at 4018.654 kb on + strand, within MPMX20_03815at 4018.694 kb on + strand, within MPMX20_03815at 4018.751 kb on - strand, within MPMX20_03815at 4018.756 kb on - strand, within MPMX20_03815at 4018.770 kb on - strand, within MPMX20_03815at 4018.825 kb on - strand, within MPMX20_03815at 4018.894 kb on + strand, within MPMX20_03815at 4018.894 kb on + strand, within MPMX20_03815at 4018.894 kb on + strand, within MPMX20_03815at 4018.894 kb on + strand, within MPMX20_03815at 4018.894 kb on + strand, within MPMX20_03815at 4018.894 kb on + strand, within MPMX20_03815at 4018.894 kb on + strand, within MPMX20_03815at 4018.894 kb on + strand, within MPMX20_03815at 4018.902 kb on - strand, within MPMX20_03815at 4018.902 kb on - strand, within MPMX20_03815at 4018.959 kb on - strandat 4018.959 kb on - strandat 4019.048 kb on + strandat 4019.056 kb on - strandat 4019.190 kb on + strand, within MPMX20_03816at 4019.193 kb on - strand, within MPMX20_03816at 4019.195 kb on + strand, within MPMX20_03816at 4019.195 kb on + strand, within MPMX20_03816at 4019.202 kb on - strand, within MPMX20_03816at 4019.203 kb on - strand, within MPMX20_03816at 4019.203 kb on - strand, within MPMX20_03816at 4019.203 kb on - strand, within MPMX20_03816

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,017,020 + MPMX20_03813 0.30 -3.4
4,017,020 + MPMX20_03813 0.30 +0.4
4,017,028 - MPMX20_03813 0.31 +0.4
4,017,044 + MPMX20_03813 0.33 -2.4
4,017,052 - MPMX20_03813 0.33 -1.4
4,017,059 - MPMX20_03813 0.34 +0.1
4,017,093 + MPMX20_03813 0.37 +1.1
4,017,101 - MPMX20_03813 0.38 -0.7
4,017,101 - MPMX20_03813 0.38 +0.3
4,017,131 + MPMX20_03813 0.40 -1.3
4,017,132 + MPMX20_03813 0.40 -1.5
4,017,137 + MPMX20_03813 0.41 -2.4
4,017,140 - MPMX20_03813 0.41 -1.5
4,017,140 - MPMX20_03813 0.41 -0.7
4,017,140 - MPMX20_03813 0.41 -0.3
4,017,140 - MPMX20_03813 0.41 +0.5
4,017,241 + MPMX20_03813 0.50 -0.5
4,017,242 - MPMX20_03813 0.50 -1.1
4,017,257 - MPMX20_03813 0.51 +0.0
4,017,338 - MPMX20_03813 0.58 -1.6
4,017,342 + MPMX20_03813 0.59 -0.3
4,017,366 + MPMX20_03813 0.61 -1.1
4,017,483 - MPMX20_03813 0.71 -2.1
4,017,489 + MPMX20_03813 0.71 +1.3
4,017,497 - MPMX20_03813 0.72 +0.3
4,017,497 - MPMX20_03813 0.72 -3.5
4,017,550 + MPMX20_03813 0.77 +1.9
4,017,555 + MPMX20_03813 0.77 +0.5
4,017,555 + MPMX20_03813 0.77 +3.6
4,017,563 - MPMX20_03813 0.78 -0.3
4,017,640 - MPMX20_03813 0.85 -0.1
4,017,670 + MPMX20_03813 0.87 -2.5
4,017,868 - -0.3
4,017,870 + +0.3
4,017,870 + -0.2
4,017,872 - -0.5
4,017,878 - -0.3
4,017,881 + +0.0
4,017,907 + -1.1
4,017,958 - MPMX20_03814 0.22 -1.0
4,017,999 - MPMX20_03814 0.33 -1.2
4,018,110 + MPMX20_03814 0.64 -1.1
4,018,112 - MPMX20_03814 0.64 +1.0
4,018,217 + +0.1
4,018,217 + +0.3
4,018,224 - -0.5
4,018,225 - +0.5
4,018,247 - -0.5
4,018,256 + +0.3
4,018,279 - -0.8
4,018,279 - -1.3
4,018,283 + -0.5
4,018,283 + -0.5
4,018,283 + -1.1
4,018,283 + -1.1
4,018,283 + +0.3
4,018,283 + +0.4
4,018,283 + +0.1
4,018,283 + -1.2
4,018,283 + +0.6
4,018,285 + +0.0
4,018,291 - -0.6
4,018,291 - +1.1
4,018,291 - -2.8
4,018,291 - -0.8
4,018,291 - -0.3
4,018,291 - -0.2
4,018,292 - -1.3
4,018,312 + +1.4
4,018,434 + MPMX20_03815 0.18 -0.1
4,018,434 + MPMX20_03815 0.18 -2.5
4,018,443 + MPMX20_03815 0.20 +1.7
4,018,482 - MPMX20_03815 0.25 -1.0
4,018,486 + MPMX20_03815 0.26 -0.9
4,018,494 - MPMX20_03815 0.27 +0.3
4,018,502 + MPMX20_03815 0.28 +0.3
4,018,502 + MPMX20_03815 0.28 -0.5
4,018,569 - MPMX20_03815 0.37 -0.4
4,018,573 - MPMX20_03815 0.38 -1.1
4,018,648 + MPMX20_03815 0.48 -2.1
4,018,654 + MPMX20_03815 0.49 +0.1
4,018,694 + MPMX20_03815 0.55 +1.3
4,018,751 - MPMX20_03815 0.63 -0.4
4,018,756 - MPMX20_03815 0.63 -0.7
4,018,770 - MPMX20_03815 0.65 +1.3
4,018,825 - MPMX20_03815 0.73 +1.3
4,018,894 + MPMX20_03815 0.83 +1.0
4,018,894 + MPMX20_03815 0.83 -1.2
4,018,894 + MPMX20_03815 0.83 +0.2
4,018,894 + MPMX20_03815 0.83 -0.8
4,018,894 + MPMX20_03815 0.83 -0.6
4,018,894 + MPMX20_03815 0.83 +0.2
4,018,894 + MPMX20_03815 0.83 +1.8
4,018,894 + MPMX20_03815 0.83 -1.5
4,018,902 - MPMX20_03815 0.84 -2.3
4,018,902 - MPMX20_03815 0.84 -2.5
4,018,959 - -0.7
4,018,959 - +0.3
4,019,048 + -0.5
4,019,056 - -2.2
4,019,190 + MPMX20_03816 0.35 -2.2
4,019,193 - MPMX20_03816 0.36 -0.1
4,019,195 + MPMX20_03816 0.37 -1.5
4,019,195 + MPMX20_03816 0.37 -1.3
4,019,202 - MPMX20_03816 0.39 -1.1
4,019,203 - MPMX20_03816 0.39 -1.7
4,019,203 - MPMX20_03816 0.39 -0.4
4,019,203 - MPMX20_03816 0.39 -1.9

Or see this region's nucleotide sequence