Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03393

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03392 and MPMX20_03393 are separated by 81 nucleotidesMPMX20_03393 and MPMX20_03394 are separated by 26 nucleotides MPMX20_03392: MPMX20_03392 - Histidine--tRNA ligase, at 3,572,286 to 3,573,560 _03392 MPMX20_03393: MPMX20_03393 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin), at 3,573,642 to 3,574,760 _03393 MPMX20_03394: MPMX20_03394 - Cytoskeleton protein RodZ, at 3,574,787 to 3,575,788 _03394 Position (kb) 3573 3574 3575Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 3573.622 kb on - strandat 3573.664 kb on - strandat 3573.664 kb on - strandat 3574.810 kb on - strandat 3574.842 kb on - strandat 3574.891 kb on - strand, within MPMX20_03394at 3574.939 kb on + strand, within MPMX20_03394at 3574.961 kb on - strand, within MPMX20_03394at 3574.968 kb on + strand, within MPMX20_03394at 3575.005 kb on - strand, within MPMX20_03394at 3575.097 kb on + strand, within MPMX20_03394at 3575.204 kb on + strand, within MPMX20_03394at 3575.376 kb on + strand, within MPMX20_03394at 3575.436 kb on - strand, within MPMX20_03394

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,573,622 - -0.8
3,573,664 - -0.7
3,573,664 - +1.2
3,574,810 - -4.9
3,574,842 - -0.2
3,574,891 - MPMX20_03394 0.10 -1.9
3,574,939 + MPMX20_03394 0.15 -1.6
3,574,961 - MPMX20_03394 0.17 +0.5
3,574,968 + MPMX20_03394 0.18 +0.7
3,575,005 - MPMX20_03394 0.22 +0.6
3,575,097 + MPMX20_03394 0.31 -0.8
3,575,204 + MPMX20_03394 0.42 -0.8
3,575,376 + MPMX20_03394 0.59 -1.6
3,575,436 - MPMX20_03394 0.65 -4.5

Or see this region's nucleotide sequence