Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01983 and MPMX20_01984 are separated by 45 nucleotides MPMX20_01984 and MPMX20_01985 are separated by 96 nucleotides MPMX20_01985 and MPMX20_01986 are separated by 100 nucleotides
MPMX20_01983: MPMX20_01983 - Glutaredoxin 4, at 2,074,510 to 2,074,857
_01983
MPMX20_01984: MPMX20_01984 - Ribonuclease T, at 2,074,903 to 2,075,553
_01984
MPMX20_01985: MPMX20_01985 - Lactoylglutathione lyase, at 2,075,650 to 2,076,057
_01985
MPMX20_01986: MPMX20_01986 - N-ethylmaleimide reductase, at 2,076,158 to 2,077,255
_01986
Position (kb)
2075
2076
2077 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6 at 2074.680 kb on + strand, within MPMX20_01983 at 2074.681 kb on - strand, within MPMX20_01983 at 2074.688 kb on - strand, within MPMX20_01983 at 2074.703 kb on - strand, within MPMX20_01983 at 2074.712 kb on + strand, within MPMX20_01983 at 2074.728 kb on + strand, within MPMX20_01983 at 2074.728 kb on + strand, within MPMX20_01983 at 2074.736 kb on - strand, within MPMX20_01983 at 2074.736 kb on - strand, within MPMX20_01983 at 2074.736 kb on - strand, within MPMX20_01983 at 2074.747 kb on - strand, within MPMX20_01983 at 2074.749 kb on + strand, within MPMX20_01983 at 2074.757 kb on - strand, within MPMX20_01983 at 2074.937 kb on - strand at 2075.087 kb on - strand, within MPMX20_01984 at 2075.097 kb on - strand, within MPMX20_01984 at 2075.119 kb on - strand, within MPMX20_01984 at 2075.333 kb on + strand, within MPMX20_01984 at 2075.407 kb on - strand, within MPMX20_01984 at 2075.446 kb on - strand, within MPMX20_01984 at 2075.689 kb on - strand at 2075.733 kb on + strand, within MPMX20_01985 at 2075.803 kb on + strand, within MPMX20_01985 at 2075.849 kb on + strand, within MPMX20_01985 at 2075.856 kb on + strand, within MPMX20_01985 at 2075.856 kb on + strand, within MPMX20_01985 at 2075.864 kb on - strand, within MPMX20_01985 at 2075.864 kb on - strand, within MPMX20_01985 at 2075.864 kb on - strand, within MPMX20_01985 at 2075.864 kb on - strand, within MPMX20_01985 at 2075.976 kb on + strand, within MPMX20_01985 at 2075.976 kb on + strand, within MPMX20_01985 at 2075.994 kb on - strand, within MPMX20_01985 at 2076.106 kb on + strand at 2076.163 kb on + strand at 2076.163 kb on + strand at 2076.166 kb on - strand at 2076.171 kb on - strand at 2076.171 kb on - strand at 2076.171 kb on - strand at 2076.171 kb on - strand at 2076.216 kb on + strand at 2076.267 kb on - strand at 2076.344 kb on + strand, within MPMX20_01986 at 2076.352 kb on - strand, within MPMX20_01986 at 2076.369 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.441 kb on + strand, within MPMX20_01986 at 2076.449 kb on - strand, within MPMX20_01986 at 2076.487 kb on + strand, within MPMX20_01986 at 2076.495 kb on - strand, within MPMX20_01986 at 2076.518 kb on + strand, within MPMX20_01986 at 2076.626 kb on + strand, within MPMX20_01986 at 2076.634 kb on - strand, within MPMX20_01986 at 2076.634 kb on - strand, within MPMX20_01986 at 2076.661 kb on + strand, within MPMX20_01986 at 2076.732 kb on - strand, within MPMX20_01986 at 2076.786 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.811 kb on + strand, within MPMX20_01986 at 2076.811 kb on + strand, within MPMX20_01986 at 2076.811 kb on + strand, within MPMX20_01986 at 2076.819 kb on - strand, within MPMX20_01986 at 2076.819 kb on - strand, within MPMX20_01986 at 2076.880 kb on + strand, within MPMX20_01986 at 2076.880 kb on + strand, within MPMX20_01986 at 2076.919 kb on - strand, within MPMX20_01986 at 2076.924 kb on - strand, within MPMX20_01986 at 2076.976 kb on - strand, within MPMX20_01986 at 2077.018 kb on + strand, within MPMX20_01986 at 2077.018 kb on + strand, within MPMX20_01986 at 2077.018 kb on + strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.028 kb on + strand, within MPMX20_01986 at 2077.028 kb on + strand, within MPMX20_01986 at 2077.028 kb on + strand, within MPMX20_01986 at 2077.028 kb on + strand, within MPMX20_01986 at 2077.033 kb on + strand, within MPMX20_01986 at 2077.033 kb on + strand, within MPMX20_01986 at 2077.036 kb on - strand, within MPMX20_01986 at 2077.036 kb on - strand, within MPMX20_01986 at 2077.036 kb on - strand, within MPMX20_01986 at 2077.041 kb on - strand, within MPMX20_01986 at 2077.047 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.054 kb on - strand, within MPMX20_01986
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,074,680 + MPMX20_01983 0.49 -0.9 2,074,681 - MPMX20_01983 0.49 +0.7 2,074,688 - MPMX20_01983 0.51 -1.1 2,074,703 - MPMX20_01983 0.55 +0.5 2,074,712 + MPMX20_01983 0.58 -0.8 2,074,728 + MPMX20_01983 0.63 -1.0 2,074,728 + MPMX20_01983 0.63 +1.4 2,074,736 - MPMX20_01983 0.65 +1.3 2,074,736 - MPMX20_01983 0.65 -1.0 2,074,736 - MPMX20_01983 0.65 +0.5 2,074,747 - MPMX20_01983 0.68 +0.5 2,074,749 + MPMX20_01983 0.69 -0.6 2,074,757 - MPMX20_01983 0.71 -0.3 2,074,937 - -0.1 2,075,087 - MPMX20_01984 0.28 -1.9 2,075,097 - MPMX20_01984 0.30 -2.8 2,075,119 - MPMX20_01984 0.33 +0.2 2,075,333 + MPMX20_01984 0.66 +0.7 2,075,407 - MPMX20_01984 0.77 +0.4 2,075,446 - MPMX20_01984 0.83 -0.3 2,075,689 - -0.4 2,075,733 + MPMX20_01985 0.20 +1.0 2,075,803 + MPMX20_01985 0.38 +0.1 2,075,849 + MPMX20_01985 0.49 -1.6 2,075,856 + MPMX20_01985 0.50 -0.5 2,075,856 + MPMX20_01985 0.50 +0.7 2,075,864 - MPMX20_01985 0.52 +0.8 2,075,864 - MPMX20_01985 0.52 -0.2 2,075,864 - MPMX20_01985 0.52 -3.9 2,075,864 - MPMX20_01985 0.52 +6.5 2,075,976 + MPMX20_01985 0.80 -0.3 2,075,976 + MPMX20_01985 0.80 -0.3 2,075,994 - MPMX20_01985 0.84 +1.6 2,076,106 + -2.6 2,076,163 + +2.3 2,076,163 + +1.7 2,076,166 - -0.8 2,076,171 - -1.3 2,076,171 - -0.2 2,076,171 - -0.1 2,076,171 - -1.1 2,076,216 + -3.0 2,076,267 - +0.0 2,076,344 + MPMX20_01986 0.17 -0.5 2,076,352 - MPMX20_01986 0.18 +0.3 2,076,369 + MPMX20_01986 0.19 +0.3 2,076,408 + MPMX20_01986 0.23 -1.3 2,076,408 + MPMX20_01986 0.23 -1.6 2,076,408 + MPMX20_01986 0.23 +0.7 2,076,408 + MPMX20_01986 0.23 +0.1 2,076,408 + MPMX20_01986 0.23 -3.6 2,076,408 + MPMX20_01986 0.23 +0.7 2,076,416 - MPMX20_01986 0.23 +0.5 2,076,416 - MPMX20_01986 0.23 -1.0 2,076,416 - MPMX20_01986 0.23 +0.1 2,076,416 - MPMX20_01986 0.23 +0.3 2,076,416 - MPMX20_01986 0.23 +0.4 2,076,416 - MPMX20_01986 0.23 +1.6 2,076,441 + MPMX20_01986 0.26 -2.5 2,076,449 - MPMX20_01986 0.27 +1.8 2,076,487 + MPMX20_01986 0.30 -0.3 2,076,495 - MPMX20_01986 0.31 +0.9 2,076,518 + MPMX20_01986 0.33 -2.0 2,076,626 + MPMX20_01986 0.43 -0.9 2,076,634 - MPMX20_01986 0.43 -0.8 2,076,634 - MPMX20_01986 0.43 +1.2 2,076,661 + MPMX20_01986 0.46 -0.1 2,076,732 - MPMX20_01986 0.52 +0.3 2,076,786 + MPMX20_01986 0.57 -0.2 2,076,796 + MPMX20_01986 0.58 -4.4 2,076,796 + MPMX20_01986 0.58 -2.7 2,076,796 + MPMX20_01986 0.58 +1.9 2,076,796 + MPMX20_01986 0.58 -0.7 2,076,796 + MPMX20_01986 0.58 +0.1 2,076,804 - MPMX20_01986 0.59 +1.8 2,076,804 - MPMX20_01986 0.59 +0.5 2,076,804 - MPMX20_01986 0.59 -1.9 2,076,804 - MPMX20_01986 0.59 +0.7 2,076,804 - MPMX20_01986 0.59 +0.7 2,076,811 + MPMX20_01986 0.59 -1.1 2,076,811 + MPMX20_01986 0.59 +0.2 2,076,811 + MPMX20_01986 0.59 +2.4 2,076,819 - MPMX20_01986 0.60 +0.9 2,076,819 - MPMX20_01986 0.60 +1.3 2,076,880 + MPMX20_01986 0.66 -0.0 2,076,880 + MPMX20_01986 0.66 +1.5 2,076,919 - MPMX20_01986 0.69 -1.5 2,076,924 - MPMX20_01986 0.70 -0.2 2,076,976 - MPMX20_01986 0.74 +0.9 2,077,018 + MPMX20_01986 0.78 -0.1 2,077,018 + MPMX20_01986 0.78 +0.8 2,077,018 + MPMX20_01986 0.78 -0.7 2,077,026 - MPMX20_01986 0.79 +4.6 2,077,026 - MPMX20_01986 0.79 -0.2 2,077,026 - MPMX20_01986 0.79 +0.0 2,077,026 - MPMX20_01986 0.79 -0.9 2,077,026 - MPMX20_01986 0.79 +1.9 2,077,028 + MPMX20_01986 0.79 -1.7 2,077,028 + MPMX20_01986 0.79 +0.8 2,077,028 + MPMX20_01986 0.79 -1.5 2,077,028 + MPMX20_01986 0.79 -0.4 2,077,033 + MPMX20_01986 0.80 +0.9 2,077,033 + MPMX20_01986 0.80 -0.2 2,077,036 - MPMX20_01986 0.80 +1.4 2,077,036 - MPMX20_01986 0.80 +0.3 2,077,036 - MPMX20_01986 0.80 +0.1 2,077,041 - MPMX20_01986 0.80 +0.3 2,077,047 + MPMX20_01986 0.81 -1.2 2,077,053 + MPMX20_01986 0.82 +1.4 2,077,053 + MPMX20_01986 0.82 +1.0 2,077,053 + MPMX20_01986 0.82 +0.6 2,077,053 + MPMX20_01986 0.82 +0.7 2,077,053 + MPMX20_01986 0.82 +1.1 2,077,053 + MPMX20_01986 0.82 +0.7 2,077,053 + MPMX20_01986 0.82 +0.2 2,077,053 + MPMX20_01986 0.82 +0.9 2,077,053 + MPMX20_01986 0.82 +1.3 2,077,053 + MPMX20_01986 0.82 +1.1 2,077,053 + MPMX20_01986 0.82 -2.1 2,077,053 + MPMX20_01986 0.82 +0.8 2,077,054 - MPMX20_01986 0.82 -0.5
Or see this region's nucleotide sequence