Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01653

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01652 and MPMX20_01653 are separated by 263 nucleotidesMPMX20_01653 and MPMX20_01654 are separated by 12 nucleotides MPMX20_01652: MPMX20_01652 - hypothetical protein, at 1,750,627 to 1,752,018 _01652 MPMX20_01653: MPMX20_01653 - Phenoxybenzoate dioxygenase subunit beta, at 1,752,282 to 1,753,232 _01653 MPMX20_01654: MPMX20_01654 - Methylxanthine N1-demethylase NdmA, at 1,753,245 to 1,754,279 _01654 Position (kb) 1752 1753 1754Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 1751.285 kb on - strand, within MPMX20_01652at 1751.287 kb on - strand, within MPMX20_01652at 1751.388 kb on + strand, within MPMX20_01652at 1751.419 kb on + strand, within MPMX20_01652at 1751.419 kb on + strand, within MPMX20_01652at 1751.419 kb on + strand, within MPMX20_01652at 1751.419 kb on + strand, within MPMX20_01652at 1751.427 kb on - strand, within MPMX20_01652at 1751.427 kb on - strand, within MPMX20_01652at 1751.427 kb on - strand, within MPMX20_01652at 1751.427 kb on - strand, within MPMX20_01652at 1751.427 kb on - strand, within MPMX20_01652at 1751.452 kb on - strand, within MPMX20_01652at 1751.475 kb on + strand, within MPMX20_01652at 1751.499 kb on + strand, within MPMX20_01652at 1751.597 kb on - strand, within MPMX20_01652at 1751.643 kb on + strand, within MPMX20_01652at 1751.645 kb on + strand, within MPMX20_01652at 1751.650 kb on - strand, within MPMX20_01652at 1751.662 kb on + strand, within MPMX20_01652at 1751.691 kb on - strand, within MPMX20_01652at 1751.700 kb on + strand, within MPMX20_01652at 1751.700 kb on + strand, within MPMX20_01652at 1751.700 kb on - strand, within MPMX20_01652at 1751.708 kb on - strand, within MPMX20_01652at 1751.708 kb on - strand, within MPMX20_01652at 1751.708 kb on - strand, within MPMX20_01652at 1751.720 kb on + strand, within MPMX20_01652at 1751.728 kb on - strand, within MPMX20_01652at 1751.737 kb on + strand, within MPMX20_01652at 1751.742 kb on + strand, within MPMX20_01652at 1751.789 kb on + strand, within MPMX20_01652at 1751.797 kb on - strand, within MPMX20_01652at 1751.797 kb on - strand, within MPMX20_01652at 1751.797 kb on - strand, within MPMX20_01652at 1751.861 kb on + strand, within MPMX20_01652at 1751.861 kb on + strand, within MPMX20_01652at 1751.867 kb on - strand, within MPMX20_01652at 1751.869 kb on - strand, within MPMX20_01652at 1751.869 kb on - strand, within MPMX20_01652at 1751.869 kb on - strand, within MPMX20_01652at 1751.869 kb on - strand, within MPMX20_01652at 1751.925 kb on + strandat 1751.925 kb on + strandat 1751.925 kb on + strandat 1751.925 kb on + strandat 1751.925 kb on + strandat 1751.925 kb on + strandat 1751.933 kb on - strandat 1751.933 kb on - strandat 1751.933 kb on - strandat 1751.933 kb on - strandat 1752.003 kb on + strandat 1752.011 kb on - strandat 1752.013 kb on + strandat 1752.013 kb on + strandat 1752.013 kb on + strandat 1752.013 kb on + strandat 1752.021 kb on - strandat 1752.021 kb on - strandat 1752.021 kb on - strandat 1752.021 kb on - strandat 1752.035 kb on + strandat 1752.035 kb on + strandat 1752.043 kb on - strandat 1752.043 kb on - strandat 1752.124 kb on - strandat 1752.223 kb on + strandat 1752.234 kb on + strandat 1752.241 kb on - strandat 1752.282 kb on + strandat 1752.305 kb on + strandat 1752.313 kb on - strandat 1752.324 kb on + strandat 1752.336 kb on + strandat 1752.361 kb on + strandat 1752.503 kb on + strand, within MPMX20_01653at 1752.523 kb on + strand, within MPMX20_01653at 1752.734 kb on + strand, within MPMX20_01653at 1752.919 kb on + strand, within MPMX20_01653at 1752.994 kb on - strand, within MPMX20_01653at 1753.018 kb on - strand, within MPMX20_01653at 1753.063 kb on - strand, within MPMX20_01653at 1753.095 kb on + strand, within MPMX20_01653at 1753.103 kb on - strand, within MPMX20_01653at 1753.103 kb on - strand, within MPMX20_01653at 1753.103 kb on - strand, within MPMX20_01653at 1753.103 kb on - strand, within MPMX20_01653at 1753.147 kb on - strandat 1753.163 kb on + strandat 1753.177 kb on + strandat 1753.328 kb on - strandat 1753.328 kb on - strandat 1753.376 kb on - strand, within MPMX20_01654at 1753.420 kb on + strand, within MPMX20_01654at 1753.442 kb on + strand, within MPMX20_01654at 1753.442 kb on + strand, within MPMX20_01654at 1753.450 kb on - strand, within MPMX20_01654at 1753.450 kb on - strand, within MPMX20_01654at 1753.457 kb on + strand, within MPMX20_01654at 1753.518 kb on - strand, within MPMX20_01654at 1753.626 kb on + strand, within MPMX20_01654at 1753.719 kb on - strand, within MPMX20_01654at 1753.721 kb on + strand, within MPMX20_01654at 1753.735 kb on + strand, within MPMX20_01654at 1753.735 kb on + strand, within MPMX20_01654at 1753.736 kb on - strand, within MPMX20_01654at 1753.771 kb on + strand, within MPMX20_01654at 1753.771 kb on + strand, within MPMX20_01654at 1753.779 kb on - strand, within MPMX20_01654at 1753.826 kb on + strand, within MPMX20_01654at 1753.876 kb on - strand, within MPMX20_01654at 1753.899 kb on + strand, within MPMX20_01654at 1753.907 kb on - strand, within MPMX20_01654at 1753.967 kb on + strand, within MPMX20_01654at 1753.975 kb on - strand, within MPMX20_01654at 1753.975 kb on - strand, within MPMX20_01654at 1753.975 kb on - strand, within MPMX20_01654at 1753.975 kb on - strand, within MPMX20_01654at 1753.975 kb on - strand, within MPMX20_01654at 1754.013 kb on + strand, within MPMX20_01654at 1754.021 kb on - strand, within MPMX20_01654at 1754.024 kb on + strand, within MPMX20_01654at 1754.069 kb on + strand, within MPMX20_01654at 1754.166 kb on - strand, within MPMX20_01654at 1754.223 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,751,285 - MPMX20_01652 0.47 +3.5
1,751,287 - MPMX20_01652 0.47 -0.8
1,751,388 + MPMX20_01652 0.55 -0.0
1,751,419 + MPMX20_01652 0.57 +1.2
1,751,419 + MPMX20_01652 0.57 -2.6
1,751,419 + MPMX20_01652 0.57 -1.4
1,751,419 + MPMX20_01652 0.57 +0.2
1,751,427 - MPMX20_01652 0.57 +4.6
1,751,427 - MPMX20_01652 0.57 -1.6
1,751,427 - MPMX20_01652 0.57 +0.6
1,751,427 - MPMX20_01652 0.57 -0.1
1,751,427 - MPMX20_01652 0.57 -0.4
1,751,452 - MPMX20_01652 0.59 -0.5
1,751,475 + MPMX20_01652 0.61 -2.6
1,751,499 + MPMX20_01652 0.63 +3.1
1,751,597 - MPMX20_01652 0.70 -0.4
1,751,643 + MPMX20_01652 0.73 -0.5
1,751,645 + MPMX20_01652 0.73 -2.9
1,751,650 - MPMX20_01652 0.73 +1.6
1,751,662 + MPMX20_01652 0.74 -0.4
1,751,691 - MPMX20_01652 0.76 +0.8
1,751,700 + MPMX20_01652 0.77 -3.2
1,751,700 + MPMX20_01652 0.77 +0.7
1,751,700 - MPMX20_01652 0.77 -0.1
1,751,708 - MPMX20_01652 0.78 +0.6
1,751,708 - MPMX20_01652 0.78 -1.9
1,751,708 - MPMX20_01652 0.78 -0.3
1,751,720 + MPMX20_01652 0.79 +2.1
1,751,728 - MPMX20_01652 0.79 +1.8
1,751,737 + MPMX20_01652 0.80 -1.9
1,751,742 + MPMX20_01652 0.80 +0.7
1,751,789 + MPMX20_01652 0.83 -0.2
1,751,797 - MPMX20_01652 0.84 +0.9
1,751,797 - MPMX20_01652 0.84 +0.7
1,751,797 - MPMX20_01652 0.84 -0.1
1,751,861 + MPMX20_01652 0.89 -1.3
1,751,861 + MPMX20_01652 0.89 +0.2
1,751,867 - MPMX20_01652 0.89 +0.4
1,751,869 - MPMX20_01652 0.89 +0.8
1,751,869 - MPMX20_01652 0.89 +0.5
1,751,869 - MPMX20_01652 0.89 +0.6
1,751,869 - MPMX20_01652 0.89 +0.1
1,751,925 + +0.1
1,751,925 + -0.3
1,751,925 + +0.5
1,751,925 + +7.7
1,751,925 + +0.7
1,751,925 + -0.0
1,751,933 - +0.4
1,751,933 - +0.2
1,751,933 - -0.3
1,751,933 - -3.1
1,752,003 + -0.3
1,752,011 - +1.5
1,752,013 + +0.8
1,752,013 + +1.1
1,752,013 + -0.6
1,752,013 + -0.4
1,752,021 - -1.3
1,752,021 - +2.7
1,752,021 - +1.3
1,752,021 - +0.7
1,752,035 + -0.4
1,752,035 + -0.5
1,752,043 - +3.7
1,752,043 - -0.2
1,752,124 - -1.0
1,752,223 + +0.5
1,752,234 + -0.4
1,752,241 - -0.2
1,752,282 + +0.9
1,752,305 + +0.4
1,752,313 - -0.8
1,752,324 + +0.4
1,752,336 + -0.3
1,752,361 + +0.2
1,752,503 + MPMX20_01653 0.23 -0.9
1,752,523 + MPMX20_01653 0.25 -0.3
1,752,734 + MPMX20_01653 0.48 -1.3
1,752,919 + MPMX20_01653 0.67 -1.1
1,752,994 - MPMX20_01653 0.75 +0.5
1,753,018 - MPMX20_01653 0.77 -1.1
1,753,063 - MPMX20_01653 0.82 -2.3
1,753,095 + MPMX20_01653 0.85 +0.7
1,753,103 - MPMX20_01653 0.86 -1.0
1,753,103 - MPMX20_01653 0.86 -0.7
1,753,103 - MPMX20_01653 0.86 +0.1
1,753,103 - MPMX20_01653 0.86 -1.2
1,753,147 - -0.3
1,753,163 + +1.9
1,753,177 + +0.6
1,753,328 - +0.4
1,753,328 - +1.3
1,753,376 - MPMX20_01654 0.13 +0.3
1,753,420 + MPMX20_01654 0.17 -0.3
1,753,442 + MPMX20_01654 0.19 +1.3
1,753,442 + MPMX20_01654 0.19 +1.4
1,753,450 - MPMX20_01654 0.20 +0.4
1,753,450 - MPMX20_01654 0.20 -0.1
1,753,457 + MPMX20_01654 0.20 -0.6
1,753,518 - MPMX20_01654 0.26 -0.0
1,753,626 + MPMX20_01654 0.37 +0.5
1,753,719 - MPMX20_01654 0.46 +1.3
1,753,721 + MPMX20_01654 0.46 -2.1
1,753,735 + MPMX20_01654 0.47 +0.3
1,753,735 + MPMX20_01654 0.47 +1.0
1,753,736 - MPMX20_01654 0.47 +0.3
1,753,771 + MPMX20_01654 0.51 +1.1
1,753,771 + MPMX20_01654 0.51 +0.0
1,753,779 - MPMX20_01654 0.52 +2.0
1,753,826 + MPMX20_01654 0.56 +0.0
1,753,876 - MPMX20_01654 0.61 +0.6
1,753,899 + MPMX20_01654 0.63 -1.2
1,753,907 - MPMX20_01654 0.64 -0.1
1,753,967 + MPMX20_01654 0.70 +0.1
1,753,975 - MPMX20_01654 0.71 +0.3
1,753,975 - MPMX20_01654 0.71 -0.4
1,753,975 - MPMX20_01654 0.71 -0.6
1,753,975 - MPMX20_01654 0.71 +0.9
1,753,975 - MPMX20_01654 0.71 +1.1
1,754,013 + MPMX20_01654 0.74 -0.3
1,754,021 - MPMX20_01654 0.75 -2.1
1,754,024 + MPMX20_01654 0.75 +0.8
1,754,069 + MPMX20_01654 0.80 +0.7
1,754,166 - MPMX20_01654 0.89 +0.6
1,754,223 + +0.9

Or see this region's nucleotide sequence