Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04350

Experiment: TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04349 and MPMX20_04350 are separated by 191 nucleotidesMPMX20_04350 and MPMX20_04351 are separated by 166 nucleotidesMPMX20_04351 and MPMX20_04352 are separated by 72 nucleotides MPMX20_04349: MPMX20_04349 - Solute-binding protein, at 4,543,699 to 4,544,670 _04349 MPMX20_04350: MPMX20_04350 - Sulfur carrier protein TusA, at 4,544,862 to 4,545,104 _04350 MPMX20_04351: MPMX20_04351 - Queuosine precursor transporter, at 4,545,271 to 4,545,936 _04351 MPMX20_04352: MPMX20_04352 - hypothetical protein, at 4,546,009 to 4,546,566 _04352 Position (kb) 4544 4545 4546Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4543.869 kb on - strand, within MPMX20_04349at 4543.872 kb on + strand, within MPMX20_04349at 4543.880 kb on - strand, within MPMX20_04349at 4543.891 kb on + strand, within MPMX20_04349at 4543.927 kb on + strand, within MPMX20_04349at 4543.927 kb on + strand, within MPMX20_04349at 4543.967 kb on - strand, within MPMX20_04349at 4544.010 kb on + strand, within MPMX20_04349at 4544.017 kb on + strand, within MPMX20_04349at 4544.018 kb on - strand, within MPMX20_04349at 4544.039 kb on + strand, within MPMX20_04349at 4544.041 kb on + strand, within MPMX20_04349at 4544.097 kb on + strand, within MPMX20_04349at 4544.145 kb on + strand, within MPMX20_04349at 4544.145 kb on + strand, within MPMX20_04349at 4544.158 kb on - strand, within MPMX20_04349at 4544.163 kb on - strand, within MPMX20_04349at 4544.272 kb on - strand, within MPMX20_04349at 4544.337 kb on - strand, within MPMX20_04349at 4544.342 kb on - strand, within MPMX20_04349at 4544.351 kb on + strand, within MPMX20_04349at 4544.351 kb on + strand, within MPMX20_04349at 4544.359 kb on - strand, within MPMX20_04349at 4544.359 kb on - strand, within MPMX20_04349at 4544.617 kb on + strandat 4544.631 kb on + strandat 4544.639 kb on - strandat 4544.639 kb on - strandat 4544.671 kb on - strandat 4544.673 kb on + strandat 4544.679 kb on + strandat 4544.679 kb on + strandat 4544.840 kb on + strandat 4544.842 kb on - strandat 4544.842 kb on - strandat 4544.867 kb on - strandat 4545.221 kb on - strandat 4545.277 kb on - strandat 4545.296 kb on + strandat 4545.353 kb on + strand, within MPMX20_04351at 4545.356 kb on + strand, within MPMX20_04351at 4545.366 kb on + strand, within MPMX20_04351at 4545.398 kb on + strand, within MPMX20_04351at 4545.442 kb on - strand, within MPMX20_04351at 4545.474 kb on - strand, within MPMX20_04351at 4545.560 kb on + strand, within MPMX20_04351at 4545.560 kb on + strand, within MPMX20_04351at 4545.568 kb on - strand, within MPMX20_04351at 4545.586 kb on - strand, within MPMX20_04351at 4545.586 kb on - strand, within MPMX20_04351at 4545.614 kb on + strand, within MPMX20_04351at 4545.622 kb on - strand, within MPMX20_04351at 4545.784 kb on + strand, within MPMX20_04351at 4545.821 kb on + strand, within MPMX20_04351at 4545.821 kb on + strand, within MPMX20_04351at 4545.821 kb on + strand, within MPMX20_04351at 4545.821 kb on + strand, within MPMX20_04351at 4545.829 kb on - strand, within MPMX20_04351at 4545.829 kb on - strand, within MPMX20_04351at 4545.829 kb on - strand, within MPMX20_04351at 4545.829 kb on - strand, within MPMX20_04351at 4545.837 kb on - strand, within MPMX20_04351at 4545.844 kb on + strand, within MPMX20_04351at 4545.893 kb on - strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.931 kb on + strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.939 kb on - strandat 4545.963 kb on - strandat 4546.034 kb on + strandat 4546.056 kb on - strandat 4546.056 kb on - strandat 4546.096 kb on - strand, within MPMX20_04352

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,543,869 - MPMX20_04349 0.17 +0.4
4,543,872 + MPMX20_04349 0.18 -0.5
4,543,880 - MPMX20_04349 0.19 -0.3
4,543,891 + MPMX20_04349 0.20 -0.2
4,543,927 + MPMX20_04349 0.23 +1.5
4,543,927 + MPMX20_04349 0.23 -0.1
4,543,967 - MPMX20_04349 0.28 -0.1
4,544,010 + MPMX20_04349 0.32 +0.7
4,544,017 + MPMX20_04349 0.33 -3.2
4,544,018 - MPMX20_04349 0.33 -0.8
4,544,039 + MPMX20_04349 0.35 -2.0
4,544,041 + MPMX20_04349 0.35 +0.4
4,544,097 + MPMX20_04349 0.41 -0.1
4,544,145 + MPMX20_04349 0.46 -0.1
4,544,145 + MPMX20_04349 0.46 +0.4
4,544,158 - MPMX20_04349 0.47 +0.0
4,544,163 - MPMX20_04349 0.48 +1.1
4,544,272 - MPMX20_04349 0.59 +1.1
4,544,337 - MPMX20_04349 0.66 +1.0
4,544,342 - MPMX20_04349 0.66 -0.1
4,544,351 + MPMX20_04349 0.67 -0.5
4,544,351 + MPMX20_04349 0.67 +1.5
4,544,359 - MPMX20_04349 0.68 -0.5
4,544,359 - MPMX20_04349 0.68 -0.9
4,544,617 + -2.1
4,544,631 + +1.1
4,544,639 - +0.2
4,544,639 - +3.0
4,544,671 - -0.2
4,544,673 + -0.5
4,544,679 + +0.3
4,544,679 + +2.4
4,544,840 + +0.7
4,544,842 - -0.2
4,544,842 - -0.5
4,544,867 - +0.6
4,545,221 - +0.5
4,545,277 - +1.5
4,545,296 + -0.0
4,545,353 + MPMX20_04351 0.12 +0.4
4,545,356 + MPMX20_04351 0.13 +1.1
4,545,366 + MPMX20_04351 0.14 -1.1
4,545,398 + MPMX20_04351 0.19 +1.7
4,545,442 - MPMX20_04351 0.26 +0.7
4,545,474 - MPMX20_04351 0.30 +0.7
4,545,560 + MPMX20_04351 0.43 +0.5
4,545,560 + MPMX20_04351 0.43 -0.0
4,545,568 - MPMX20_04351 0.45 +2.7
4,545,586 - MPMX20_04351 0.47 -0.3
4,545,586 - MPMX20_04351 0.47 +0.3
4,545,614 + MPMX20_04351 0.52 -0.1
4,545,622 - MPMX20_04351 0.53 -1.0
4,545,784 + MPMX20_04351 0.77 +3.1
4,545,821 + MPMX20_04351 0.83 -0.0
4,545,821 + MPMX20_04351 0.83 +0.7
4,545,821 + MPMX20_04351 0.83 -0.2
4,545,821 + MPMX20_04351 0.83 +1.3
4,545,829 - MPMX20_04351 0.84 +0.3
4,545,829 - MPMX20_04351 0.84 +0.2
4,545,829 - MPMX20_04351 0.84 +0.3
4,545,829 - MPMX20_04351 0.84 +0.0
4,545,837 - MPMX20_04351 0.85 +0.1
4,545,844 + MPMX20_04351 0.86 +0.7
4,545,893 - +0.9
4,545,931 + -0.9
4,545,931 + +0.4
4,545,931 + -0.6
4,545,931 + -0.1
4,545,931 + +1.6
4,545,931 + +1.1
4,545,931 + +0.7
4,545,931 + +2.0
4,545,931 + -0.9
4,545,931 + -0.0
4,545,931 + -0.0
4,545,939 - +0.9
4,545,939 - -0.9
4,545,939 - +0.1
4,545,939 - -0.2
4,545,939 - +0.9
4,545,939 - -0.2
4,545,939 - +0.5
4,545,939 - -0.1
4,545,939 - -0.1
4,545,939 - -0.1
4,545,939 - -1.6
4,545,939 - +0.3
4,545,939 - -0.0
4,545,939 - -0.6
4,545,963 - +0.1
4,546,034 + -2.8
4,546,056 - -2.2
4,546,056 - +0.1
4,546,096 - MPMX20_04352 0.16 -0.4

Or see this region's nucleotide sequence