Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00318

Experiment: TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00316 and MPMX20_00317 are separated by 9 nucleotidesMPMX20_00317 and MPMX20_00318 overlap by 4 nucleotidesMPMX20_00318 and MPMX20_00319 overlap by 8 nucleotides MPMX20_00316: MPMX20_00316 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL, at 336,443 to 337,123 _00316 MPMX20_00317: MPMX20_00317 - Putative phosphonates utilization ATP-binding protein PhnK, at 337,133 to 337,888 _00317 MPMX20_00318: MPMX20_00318 - Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, at 337,885 to 338,730 _00318 MPMX20_00319: MPMX20_00319 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI, at 338,723 to 339,787 _00319 Position (kb) 337 338 339Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 336.892 kb on + strand, within MPMX20_00316at 336.932 kb on - strand, within MPMX20_00316at 336.976 kb on - strand, within MPMX20_00316at 337.012 kb on - strand, within MPMX20_00316at 337.017 kb on + strand, within MPMX20_00316at 337.033 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.057 kb on - strandat 337.094 kb on + strandat 337.102 kb on - strandat 337.118 kb on + strandat 337.118 kb on + strandat 337.118 kb on + strandat 337.126 kb on - strandat 337.129 kb on - strandat 337.156 kb on - strandat 337.279 kb on - strand, within MPMX20_00317at 337.323 kb on - strand, within MPMX20_00317at 337.323 kb on - strand, within MPMX20_00317at 337.366 kb on + strand, within MPMX20_00317at 337.368 kb on - strand, within MPMX20_00317at 337.384 kb on - strand, within MPMX20_00317at 337.457 kb on + strand, within MPMX20_00317at 337.519 kb on - strand, within MPMX20_00317at 337.519 kb on - strand, within MPMX20_00317at 337.672 kb on + strand, within MPMX20_00317at 337.729 kb on + strand, within MPMX20_00317at 337.768 kb on + strand, within MPMX20_00317at 337.795 kb on - strand, within MPMX20_00317at 337.795 kb on - strand, within MPMX20_00317at 337.801 kb on - strand, within MPMX20_00317at 337.810 kb on + strand, within MPMX20_00317at 337.811 kb on - strand, within MPMX20_00317at 337.841 kb on - strandat 337.845 kb on + strandat 337.853 kb on - strandat 337.854 kb on - strandat 337.869 kb on + strandat 338.025 kb on + strand, within MPMX20_00318at 338.071 kb on + strand, within MPMX20_00318at 338.071 kb on + strand, within MPMX20_00318at 338.079 kb on - strand, within MPMX20_00318at 338.087 kb on + strand, within MPMX20_00318at 338.119 kb on - strand, within MPMX20_00318at 338.121 kb on + strand, within MPMX20_00318at 338.144 kb on + strand, within MPMX20_00318at 338.172 kb on + strand, within MPMX20_00318at 338.215 kb on + strand, within MPMX20_00318at 338.215 kb on + strand, within MPMX20_00318at 338.222 kb on - strand, within MPMX20_00318at 338.223 kb on - strand, within MPMX20_00318at 338.223 kb on - strand, within MPMX20_00318at 338.223 kb on - strand, within MPMX20_00318at 338.223 kb on - strand, within MPMX20_00318at 338.279 kb on - strand, within MPMX20_00318at 338.279 kb on - strand, within MPMX20_00318at 338.286 kb on + strand, within MPMX20_00318at 338.286 kb on + strand, within MPMX20_00318at 338.294 kb on - strand, within MPMX20_00318at 338.294 kb on - strand, within MPMX20_00318at 338.325 kb on + strand, within MPMX20_00318at 338.333 kb on - strand, within MPMX20_00318at 338.335 kb on + strand, within MPMX20_00318at 338.338 kb on - strand, within MPMX20_00318at 338.414 kb on + strand, within MPMX20_00318at 338.430 kb on + strand, within MPMX20_00318at 338.458 kb on - strand, within MPMX20_00318at 338.458 kb on - strand, within MPMX20_00318at 338.459 kb on + strand, within MPMX20_00318at 338.705 kb on + strandat 338.751 kb on + strandat 338.796 kb on + strandat 338.823 kb on + strandat 338.846 kb on - strand, within MPMX20_00319at 338.908 kb on + strand, within MPMX20_00319at 338.908 kb on + strand, within MPMX20_00319at 338.930 kb on + strand, within MPMX20_00319at 338.937 kb on + strand, within MPMX20_00319at 338.965 kb on + strand, within MPMX20_00319at 339.007 kb on + strand, within MPMX20_00319at 339.044 kb on - strand, within MPMX20_00319at 339.068 kb on + strand, within MPMX20_00319at 339.069 kb on - strand, within MPMX20_00319at 339.159 kb on + strand, within MPMX20_00319at 339.159 kb on + strand, within MPMX20_00319at 339.159 kb on + strand, within MPMX20_00319at 339.162 kb on - strand, within MPMX20_00319at 339.162 kb on - strand, within MPMX20_00319at 339.162 kb on - strand, within MPMX20_00319at 339.219 kb on - strand, within MPMX20_00319at 339.228 kb on - strand, within MPMX20_00319at 339.265 kb on - strand, within MPMX20_00319at 339.338 kb on + strand, within MPMX20_00319at 339.357 kb on - strand, within MPMX20_00319at 339.362 kb on + strand, within MPMX20_00319at 339.370 kb on - strand, within MPMX20_00319at 339.399 kb on - strand, within MPMX20_00319at 339.427 kb on - strand, within MPMX20_00319at 339.429 kb on + strand, within MPMX20_00319at 339.491 kb on + strand, within MPMX20_00319at 339.590 kb on - strand, within MPMX20_00319at 339.630 kb on - strand, within MPMX20_00319at 339.639 kb on + strand, within MPMX20_00319at 339.647 kb on - strand, within MPMX20_00319at 339.682 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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336,892 + MPMX20_00316 0.66 -0.8
336,932 - MPMX20_00316 0.72 -0.6
336,976 - MPMX20_00316 0.78 +1.5
337,012 - MPMX20_00316 0.84 -1.1
337,017 + MPMX20_00316 0.84 -0.2
337,033 + MPMX20_00316 0.87 +0.6
337,049 + MPMX20_00316 0.89 -0.9
337,049 + MPMX20_00316 0.89 -0.9
337,049 + MPMX20_00316 0.89 +0.5
337,049 + MPMX20_00316 0.89 +0.7
337,049 + MPMX20_00316 0.89 +2.3
337,057 - -0.3
337,094 + -0.4
337,102 - +0.9
337,118 + +2.1
337,118 + -1.0
337,118 + -1.6
337,126 - +0.1
337,129 - -0.3
337,156 - -0.9
337,279 - MPMX20_00317 0.19 +0.3
337,323 - MPMX20_00317 0.25 +1.7
337,323 - MPMX20_00317 0.25 +0.5
337,366 + MPMX20_00317 0.31 -1.7
337,368 - MPMX20_00317 0.31 -0.3
337,384 - MPMX20_00317 0.33 -0.2
337,457 + MPMX20_00317 0.43 -0.2
337,519 - MPMX20_00317 0.51 -2.1
337,519 - MPMX20_00317 0.51 -1.3
337,672 + MPMX20_00317 0.71 -0.6
337,729 + MPMX20_00317 0.79 +1.0
337,768 + MPMX20_00317 0.84 -1.6
337,795 - MPMX20_00317 0.88 -0.5
337,795 - MPMX20_00317 0.88 +1.4
337,801 - MPMX20_00317 0.88 -0.5
337,810 + MPMX20_00317 0.90 -0.3
337,811 - MPMX20_00317 0.90 +0.1
337,841 - -1.7
337,845 + +0.2
337,853 - -1.4
337,854 - +1.2
337,869 + -0.2
338,025 + MPMX20_00318 0.17 +0.3
338,071 + MPMX20_00318 0.22 +0.4
338,071 + MPMX20_00318 0.22 +3.4
338,079 - MPMX20_00318 0.23 +0.4
338,087 + MPMX20_00318 0.24 +0.1
338,119 - MPMX20_00318 0.28 -1.3
338,121 + MPMX20_00318 0.28 +0.1
338,144 + MPMX20_00318 0.31 -0.2
338,172 + MPMX20_00318 0.34 +0.9
338,215 + MPMX20_00318 0.39 -0.0
338,215 + MPMX20_00318 0.39 -1.7
338,222 - MPMX20_00318 0.40 +0.5
338,223 - MPMX20_00318 0.40 -0.4
338,223 - MPMX20_00318 0.40 -0.8
338,223 - MPMX20_00318 0.40 +0.2
338,223 - MPMX20_00318 0.40 +0.7
338,279 - MPMX20_00318 0.47 +0.2
338,279 - MPMX20_00318 0.47 -0.0
338,286 + MPMX20_00318 0.47 -0.7
338,286 + MPMX20_00318 0.47 -0.7
338,294 - MPMX20_00318 0.48 -0.1
338,294 - MPMX20_00318 0.48 +0.4
338,325 + MPMX20_00318 0.52 -0.1
338,333 - MPMX20_00318 0.53 +0.3
338,335 + MPMX20_00318 0.53 -0.7
338,338 - MPMX20_00318 0.54 +1.5
338,414 + MPMX20_00318 0.63 -1.2
338,430 + MPMX20_00318 0.64 +1.4
338,458 - MPMX20_00318 0.68 -3.4
338,458 - MPMX20_00318 0.68 -0.8
338,459 + MPMX20_00318 0.68 -0.3
338,705 + -0.0
338,751 + +0.2
338,796 + +2.1
338,823 + +0.5
338,846 - MPMX20_00319 0.12 +1.1
338,908 + MPMX20_00319 0.17 -0.0
338,908 + MPMX20_00319 0.17 +0.1
338,930 + MPMX20_00319 0.19 +0.5
338,937 + MPMX20_00319 0.20 -0.7
338,965 + MPMX20_00319 0.23 +0.7
339,007 + MPMX20_00319 0.27 -0.9
339,044 - MPMX20_00319 0.30 +0.7
339,068 + MPMX20_00319 0.32 +1.1
339,069 - MPMX20_00319 0.32 -0.9
339,159 + MPMX20_00319 0.41 -0.5
339,159 + MPMX20_00319 0.41 +1.9
339,159 + MPMX20_00319 0.41 +0.7
339,162 - MPMX20_00319 0.41 +0.1
339,162 - MPMX20_00319 0.41 +0.7
339,162 - MPMX20_00319 0.41 +1.7
339,219 - MPMX20_00319 0.47 -0.9
339,228 - MPMX20_00319 0.47 +2.0
339,265 - MPMX20_00319 0.51 +1.3
339,338 + MPMX20_00319 0.58 -1.2
339,357 - MPMX20_00319 0.60 -1.2
339,362 + MPMX20_00319 0.60 -0.6
339,370 - MPMX20_00319 0.61 +0.6
339,399 - MPMX20_00319 0.63 -0.2
339,427 - MPMX20_00319 0.66 -1.0
339,429 + MPMX20_00319 0.66 +0.0
339,491 + MPMX20_00319 0.72 -0.1
339,590 - MPMX20_00319 0.81 -0.1
339,630 - MPMX20_00319 0.85 -1.1
339,639 + MPMX20_00319 0.86 +0.8
339,647 - MPMX20_00319 0.87 -0.7
339,682 + -0.7

Or see this region's nucleotide sequence