Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00313

Experiment: TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00311 and MPMX20_00312 are separated by 54 nucleotidesMPMX20_00312 and MPMX20_00313 are separated by 9 nucleotidesMPMX20_00313 and MPMX20_00314 overlap by 8 nucleotidesMPMX20_00314 and MPMX20_00315 overlap by 1 nucleotides MPMX20_00311: MPMX20_00311 - hypothetical protein, at 333,189 to 333,512 _00311 MPMX20_00312: MPMX20_00312 - Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase, at 333,567 to 334,325 _00312 MPMX20_00313: MPMX20_00313 - Aminoalkylphosphonate N-acetyltransferase, at 334,335 to 334,769 _00313 MPMX20_00314: MPMX20_00314 - Ribose 1,5-bisphosphate phosphokinase PhnN, at 334,762 to 335,310 _00314 MPMX20_00315: MPMX20_00315 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase, at 335,310 to 336,446 _00315 Position (kb) 334 335Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 333.477 kb on + strand, within MPMX20_00311at 333.521 kb on + strandat 333.536 kb on + strandat 333.544 kb on + strandat 333.556 kb on - strandat 333.591 kb on + strandat 333.599 kb on - strandat 333.671 kb on - strand, within MPMX20_00312at 333.674 kb on + strand, within MPMX20_00312at 333.674 kb on + strand, within MPMX20_00312at 333.682 kb on - strand, within MPMX20_00312at 333.682 kb on - strand, within MPMX20_00312at 333.682 kb on - strand, within MPMX20_00312at 333.695 kb on + strand, within MPMX20_00312at 333.709 kb on + strand, within MPMX20_00312at 333.717 kb on - strand, within MPMX20_00312at 333.727 kb on - strand, within MPMX20_00312at 333.737 kb on + strand, within MPMX20_00312at 333.760 kb on - strand, within MPMX20_00312at 333.772 kb on + strand, within MPMX20_00312at 333.773 kb on - strand, within MPMX20_00312at 333.855 kb on + strand, within MPMX20_00312at 333.863 kb on - strand, within MPMX20_00312at 334.026 kb on + strand, within MPMX20_00312at 334.027 kb on - strand, within MPMX20_00312at 334.032 kb on + strand, within MPMX20_00312at 334.034 kb on - strand, within MPMX20_00312at 334.037 kb on + strand, within MPMX20_00312at 334.040 kb on - strand, within MPMX20_00312at 334.040 kb on - strand, within MPMX20_00312at 334.284 kb on - strandat 334.296 kb on - strandat 334.314 kb on + strandat 334.341 kb on - strandat 334.341 kb on - strandat 334.367 kb on + strandat 334.374 kb on + strandat 334.375 kb on - strandat 334.375 kb on - strandat 334.399 kb on + strand, within MPMX20_00313at 334.418 kb on - strand, within MPMX20_00313at 334.436 kb on + strand, within MPMX20_00313at 334.476 kb on - strand, within MPMX20_00313at 334.481 kb on - strand, within MPMX20_00313at 334.493 kb on + strand, within MPMX20_00313at 334.493 kb on + strand, within MPMX20_00313at 334.493 kb on + strand, within MPMX20_00313at 334.493 kb on + strand, within MPMX20_00313at 334.501 kb on - strand, within MPMX20_00313at 334.501 kb on - strand, within MPMX20_00313at 334.501 kb on - strand, within MPMX20_00313at 334.501 kb on - strand, within MPMX20_00313at 334.501 kb on - strand, within MPMX20_00313at 334.501 kb on - strand, within MPMX20_00313at 334.557 kb on + strand, within MPMX20_00313at 334.570 kb on - strand, within MPMX20_00313at 334.595 kb on + strand, within MPMX20_00313at 334.603 kb on - strand, within MPMX20_00313at 334.639 kb on - strand, within MPMX20_00313at 334.680 kb on + strand, within MPMX20_00313at 334.842 kb on + strand, within MPMX20_00314at 334.842 kb on + strand, within MPMX20_00314at 334.850 kb on - strand, within MPMX20_00314at 334.850 kb on - strand, within MPMX20_00314at 334.891 kb on - strand, within MPMX20_00314at 334.944 kb on + strand, within MPMX20_00314at 334.944 kb on - strand, within MPMX20_00314at 334.952 kb on - strand, within MPMX20_00314at 334.952 kb on - strand, within MPMX20_00314at 334.956 kb on + strand, within MPMX20_00314at 334.982 kb on + strand, within MPMX20_00314at 334.982 kb on + strand, within MPMX20_00314at 334.982 kb on + strand, within MPMX20_00314at 334.990 kb on - strand, within MPMX20_00314at 335.003 kb on + strand, within MPMX20_00314at 335.015 kb on - strand, within MPMX20_00314at 335.024 kb on - strand, within MPMX20_00314at 335.055 kb on + strand, within MPMX20_00314at 335.069 kb on - strand, within MPMX20_00314at 335.081 kb on - strand, within MPMX20_00314at 335.163 kb on - strand, within MPMX20_00314at 335.178 kb on - strand, within MPMX20_00314at 335.209 kb on - strand, within MPMX20_00314at 335.209 kb on - strand, within MPMX20_00314at 335.209 kb on - strand, within MPMX20_00314at 335.209 kb on - strand, within MPMX20_00314at 335.224 kb on - strand, within MPMX20_00314at 335.241 kb on + strand, within MPMX20_00314at 335.263 kb on + strandat 335.263 kb on + strandat 335.271 kb on - strandat 335.271 kb on - strandat 335.271 kb on - strandat 335.283 kb on - strandat 335.299 kb on - strandat 335.332 kb on + strandat 335.362 kb on + strandat 335.362 kb on + strandat 335.362 kb on + strandat 335.370 kb on - strandat 335.370 kb on - strandat 335.467 kb on + strand, within MPMX20_00315at 335.477 kb on + strand, within MPMX20_00315at 335.548 kb on + strand, within MPMX20_00315at 335.556 kb on - strand, within MPMX20_00315at 335.559 kb on + strand, within MPMX20_00315at 335.607 kb on - strand, within MPMX20_00315at 335.656 kb on - strand, within MPMX20_00315at 335.741 kb on + strand, within MPMX20_00315

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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333,477 + MPMX20_00311 0.89 +0.8
333,521 + -0.3
333,536 + -1.4
333,544 + -1.4
333,556 - -2.5
333,591 + +1.3
333,599 - +0.3
333,671 - MPMX20_00312 0.14 -1.2
333,674 + MPMX20_00312 0.14 +0.0
333,674 + MPMX20_00312 0.14 +0.7
333,682 - MPMX20_00312 0.15 +2.7
333,682 - MPMX20_00312 0.15 +0.1
333,682 - MPMX20_00312 0.15 +0.8
333,695 + MPMX20_00312 0.17 -1.9
333,709 + MPMX20_00312 0.19 +0.7
333,717 - MPMX20_00312 0.20 +0.1
333,727 - MPMX20_00312 0.21 -0.3
333,737 + MPMX20_00312 0.22 +0.3
333,760 - MPMX20_00312 0.25 +1.0
333,772 + MPMX20_00312 0.27 +0.3
333,773 - MPMX20_00312 0.27 +1.4
333,855 + MPMX20_00312 0.38 +1.7
333,863 - MPMX20_00312 0.39 -0.7
334,026 + MPMX20_00312 0.60 -0.3
334,027 - MPMX20_00312 0.61 -0.0
334,032 + MPMX20_00312 0.61 +0.4
334,034 - MPMX20_00312 0.62 -0.3
334,037 + MPMX20_00312 0.62 +0.3
334,040 - MPMX20_00312 0.62 +0.6
334,040 - MPMX20_00312 0.62 -0.5
334,284 - +0.1
334,296 - +0.1
334,314 + -0.4
334,341 - +0.9
334,341 - +1.4
334,367 + -0.1
334,374 + +0.1
334,375 - -0.9
334,375 - +0.4
334,399 + MPMX20_00313 0.15 -2.0
334,418 - MPMX20_00313 0.19 -1.0
334,436 + MPMX20_00313 0.23 -0.1
334,476 - MPMX20_00313 0.32 +0.2
334,481 - MPMX20_00313 0.34 +1.6
334,493 + MPMX20_00313 0.36 -0.1
334,493 + MPMX20_00313 0.36 -0.1
334,493 + MPMX20_00313 0.36 +0.2
334,493 + MPMX20_00313 0.36 +4.0
334,501 - MPMX20_00313 0.38 -1.0
334,501 - MPMX20_00313 0.38 +2.4
334,501 - MPMX20_00313 0.38 -0.6
334,501 - MPMX20_00313 0.38 -1.1
334,501 - MPMX20_00313 0.38 +0.7
334,501 - MPMX20_00313 0.38 -1.5
334,557 + MPMX20_00313 0.51 +0.5
334,570 - MPMX20_00313 0.54 +0.1
334,595 + MPMX20_00313 0.60 -0.2
334,603 - MPMX20_00313 0.62 -0.1
334,639 - MPMX20_00313 0.70 -0.7
334,680 + MPMX20_00313 0.79 +0.4
334,842 + MPMX20_00314 0.15 +1.3
334,842 + MPMX20_00314 0.15 +0.0
334,850 - MPMX20_00314 0.16 -1.3
334,850 - MPMX20_00314 0.16 -0.5
334,891 - MPMX20_00314 0.23 -0.3
334,944 + MPMX20_00314 0.33 -0.3
334,944 - MPMX20_00314 0.33 +0.7
334,952 - MPMX20_00314 0.35 -1.6
334,952 - MPMX20_00314 0.35 -0.3
334,956 + MPMX20_00314 0.35 +1.6
334,982 + MPMX20_00314 0.40 -1.3
334,982 + MPMX20_00314 0.40 -0.1
334,982 + MPMX20_00314 0.40 +0.2
334,990 - MPMX20_00314 0.42 +0.9
335,003 + MPMX20_00314 0.44 -0.3
335,015 - MPMX20_00314 0.46 -0.2
335,024 - MPMX20_00314 0.48 -1.1
335,055 + MPMX20_00314 0.53 +0.0
335,069 - MPMX20_00314 0.56 +0.5
335,081 - MPMX20_00314 0.58 +0.3
335,163 - MPMX20_00314 0.73 +0.5
335,178 - MPMX20_00314 0.76 +0.1
335,209 - MPMX20_00314 0.81 +0.4
335,209 - MPMX20_00314 0.81 +0.5
335,209 - MPMX20_00314 0.81 -0.7
335,209 - MPMX20_00314 0.81 +0.4
335,224 - MPMX20_00314 0.84 +0.1
335,241 + MPMX20_00314 0.87 -1.4
335,263 + +0.9
335,263 + +0.2
335,271 - -1.0
335,271 - -0.4
335,271 - -0.9
335,283 - -0.9
335,299 - -0.3
335,332 + +0.3
335,362 + -0.7
335,362 + +0.8
335,362 + +0.1
335,370 - -0.9
335,370 - -0.8
335,467 + MPMX20_00315 0.14 +2.7
335,477 + MPMX20_00315 0.15 +1.4
335,548 + MPMX20_00315 0.21 +0.5
335,556 - MPMX20_00315 0.22 -1.2
335,559 + MPMX20_00315 0.22 +0.1
335,607 - MPMX20_00315 0.26 -0.3
335,656 - MPMX20_00315 0.30 +1.2
335,741 + MPMX20_00315 0.38 +0.7

Or see this region's nucleotide sequence