Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01050

Experiment: M9 plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01049 and MPMX20_01050 are separated by 87 nucleotidesMPMX20_01050 and MPMX20_01051 are separated by 78 nucleotides MPMX20_01049: MPMX20_01049 - HTH-type transcriptional regulator NorG, at 1,103,646 to 1,105,067 _01049 MPMX20_01050: MPMX20_01050 - hypothetical protein, at 1,105,155 to 1,105,766 _01050 MPMX20_01051: MPMX20_01051 - Lactose operon repressor, at 1,105,845 to 1,106,915 _01051 Position (kb) 1105 1106Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1104.158 kb on - strand, within MPMX20_01049at 1104.359 kb on - strand, within MPMX20_01049at 1104.369 kb on - strand, within MPMX20_01049at 1104.384 kb on + strand, within MPMX20_01049at 1104.384 kb on + strand, within MPMX20_01049at 1104.440 kb on - strand, within MPMX20_01049at 1104.535 kb on - strand, within MPMX20_01049at 1104.557 kb on + strand, within MPMX20_01049at 1104.595 kb on + strand, within MPMX20_01049at 1104.595 kb on + strand, within MPMX20_01049at 1104.690 kb on + strand, within MPMX20_01049at 1104.698 kb on - strand, within MPMX20_01049at 1104.698 kb on - strand, within MPMX20_01049at 1104.698 kb on - strand, within MPMX20_01049at 1104.698 kb on - strand, within MPMX20_01049at 1104.699 kb on - strand, within MPMX20_01049at 1104.713 kb on + strand, within MPMX20_01049at 1104.802 kb on - strand, within MPMX20_01049at 1104.859 kb on + strand, within MPMX20_01049at 1104.872 kb on - strand, within MPMX20_01049at 1104.879 kb on + strand, within MPMX20_01049at 1104.888 kb on - strand, within MPMX20_01049at 1104.910 kb on - strand, within MPMX20_01049at 1104.920 kb on + strand, within MPMX20_01049at 1104.967 kb on - strandat 1105.000 kb on + strandat 1105.013 kb on - strandat 1105.176 kb on - strandat 1105.194 kb on - strandat 1105.223 kb on - strand, within MPMX20_01050at 1105.263 kb on - strand, within MPMX20_01050at 1105.263 kb on - strand, within MPMX20_01050at 1105.263 kb on - strand, within MPMX20_01050at 1105.427 kb on - strand, within MPMX20_01050at 1105.434 kb on - strand, within MPMX20_01050at 1105.482 kb on - strand, within MPMX20_01050at 1105.505 kb on + strand, within MPMX20_01050at 1105.519 kb on + strand, within MPMX20_01050at 1105.553 kb on - strand, within MPMX20_01050at 1105.608 kb on - strand, within MPMX20_01050at 1105.627 kb on + strand, within MPMX20_01050at 1105.715 kb on - strandat 1105.717 kb on + strandat 1105.875 kb on - strandat 1105.877 kb on + strandat 1105.934 kb on - strandat 1106.001 kb on + strand, within MPMX20_01051at 1106.106 kb on + strand, within MPMX20_01051at 1106.106 kb on + strand, within MPMX20_01051at 1106.114 kb on - strand, within MPMX20_01051at 1106.151 kb on + strand, within MPMX20_01051at 1106.154 kb on - strand, within MPMX20_01051at 1106.156 kb on + strand, within MPMX20_01051at 1106.252 kb on - strand, within MPMX20_01051at 1106.294 kb on - strand, within MPMX20_01051at 1106.311 kb on + strand, within MPMX20_01051at 1106.318 kb on + strand, within MPMX20_01051at 1106.328 kb on + strand, within MPMX20_01051at 1106.402 kb on + strand, within MPMX20_01051at 1106.436 kb on + strand, within MPMX20_01051at 1106.444 kb on - strand, within MPMX20_01051at 1106.444 kb on - strand, within MPMX20_01051at 1106.459 kb on + strand, within MPMX20_01051at 1106.467 kb on - strand, within MPMX20_01051at 1106.492 kb on + strand, within MPMX20_01051at 1106.584 kb on - strand, within MPMX20_01051at 1106.606 kb on - strand, within MPMX20_01051at 1106.713 kb on - strand, within MPMX20_01051at 1106.759 kb on + strand, within MPMX20_01051

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,104,158 - MPMX20_01049 0.36 +0.6
1,104,359 - MPMX20_01049 0.50 -0.5
1,104,369 - MPMX20_01049 0.51 -1.3
1,104,384 + MPMX20_01049 0.52 -0.6
1,104,384 + MPMX20_01049 0.52 +0.2
1,104,440 - MPMX20_01049 0.56 +0.5
1,104,535 - MPMX20_01049 0.63 +1.3
1,104,557 + MPMX20_01049 0.64 +2.7
1,104,595 + MPMX20_01049 0.67 +1.0
1,104,595 + MPMX20_01049 0.67 +1.3
1,104,690 + MPMX20_01049 0.73 +1.5
1,104,698 - MPMX20_01049 0.74 +1.4
1,104,698 - MPMX20_01049 0.74 -0.3
1,104,698 - MPMX20_01049 0.74 -0.4
1,104,698 - MPMX20_01049 0.74 +0.4
1,104,699 - MPMX20_01049 0.74 -2.0
1,104,713 + MPMX20_01049 0.75 +2.5
1,104,802 - MPMX20_01049 0.81 +1.5
1,104,859 + MPMX20_01049 0.85 -1.5
1,104,872 - MPMX20_01049 0.86 -1.5
1,104,879 + MPMX20_01049 0.87 -0.6
1,104,888 - MPMX20_01049 0.87 -0.4
1,104,910 - MPMX20_01049 0.89 -0.9
1,104,920 + MPMX20_01049 0.90 +0.5
1,104,967 - -0.7
1,105,000 + -0.3
1,105,013 - -0.3
1,105,176 - -1.0
1,105,194 - +0.3
1,105,223 - MPMX20_01050 0.11 -0.4
1,105,263 - MPMX20_01050 0.18 +0.1
1,105,263 - MPMX20_01050 0.18 -1.9
1,105,263 - MPMX20_01050 0.18 -0.0
1,105,427 - MPMX20_01050 0.44 -1.1
1,105,434 - MPMX20_01050 0.46 -1.4
1,105,482 - MPMX20_01050 0.53 -1.0
1,105,505 + MPMX20_01050 0.57 +0.1
1,105,519 + MPMX20_01050 0.59 -1.3
1,105,553 - MPMX20_01050 0.65 -0.4
1,105,608 - MPMX20_01050 0.74 -3.0
1,105,627 + MPMX20_01050 0.77 -2.2
1,105,715 - +0.3
1,105,717 + -0.6
1,105,875 - -1.9
1,105,877 + -1.5
1,105,934 - -4.0
1,106,001 + MPMX20_01051 0.15 -0.5
1,106,106 + MPMX20_01051 0.24 +0.0
1,106,106 + MPMX20_01051 0.24 -0.1
1,106,114 - MPMX20_01051 0.25 -0.6
1,106,151 + MPMX20_01051 0.29 -0.8
1,106,154 - MPMX20_01051 0.29 +2.1
1,106,156 + MPMX20_01051 0.29 -0.6
1,106,252 - MPMX20_01051 0.38 +1.3
1,106,294 - MPMX20_01051 0.42 -1.9
1,106,311 + MPMX20_01051 0.44 -0.8
1,106,318 + MPMX20_01051 0.44 -1.4
1,106,328 + MPMX20_01051 0.45 -3.0
1,106,402 + MPMX20_01051 0.52 +2.3
1,106,436 + MPMX20_01051 0.55 +0.5
1,106,444 - MPMX20_01051 0.56 -1.0
1,106,444 - MPMX20_01051 0.56 -1.5
1,106,459 + MPMX20_01051 0.57 -1.3
1,106,467 - MPMX20_01051 0.58 +0.5
1,106,492 + MPMX20_01051 0.60 -0.4
1,106,584 - MPMX20_01051 0.69 +1.0
1,106,606 - MPMX20_01051 0.71 -0.0
1,106,713 - MPMX20_01051 0.81 -0.7
1,106,759 + MPMX20_01051 0.85 -3.3

Or see this region's nucleotide sequence