Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03052

Experiment: 1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03051 and MPMX20_03052 are separated by 41 nucleotidesMPMX20_03052 and MPMX20_03053 are separated by 347 nucleotidesMPMX20_03053 and MPMX20_03054 overlap by 26 nucleotides MPMX20_03051: MPMX20_03051 - Chaperone protein DnaK, at 3,193,258 to 3,194,610 _03051 MPMX20_03052: MPMX20_03052 - hypothetical protein, at 3,194,652 to 3,196,151 _03052 MPMX20_03053: MPMX20_03053 - hypothetical protein, at 3,196,499 to 3,196,972 _03053 MPMX20_03054: MPMX20_03054 - hypothetical protein, at 3,196,947 to 3,197,675 _03054 Position (kb) 3194 3195 3196 3197Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 3193.652 kb on - strand, within MPMX20_03051at 3193.710 kb on + strand, within MPMX20_03051at 3193.710 kb on + strand, within MPMX20_03051at 3193.734 kb on + strand, within MPMX20_03051at 3193.741 kb on + strand, within MPMX20_03051at 3193.741 kb on + strand, within MPMX20_03051at 3193.779 kb on - strand, within MPMX20_03051at 3193.830 kb on + strand, within MPMX20_03051at 3193.875 kb on - strand, within MPMX20_03051at 3193.879 kb on + strand, within MPMX20_03051at 3194.106 kb on + strand, within MPMX20_03051at 3194.201 kb on - strand, within MPMX20_03051at 3194.229 kb on + strand, within MPMX20_03051at 3194.229 kb on + strand, within MPMX20_03051at 3194.229 kb on + strand, within MPMX20_03051at 3194.229 kb on + strand, within MPMX20_03051at 3194.237 kb on - strand, within MPMX20_03051at 3194.237 kb on - strand, within MPMX20_03051at 3194.237 kb on - strand, within MPMX20_03051at 3194.276 kb on + strand, within MPMX20_03051at 3194.276 kb on + strand, within MPMX20_03051at 3194.276 kb on + strand, within MPMX20_03051at 3194.284 kb on - strand, within MPMX20_03051at 3194.284 kb on - strand, within MPMX20_03051at 3194.284 kb on - strand, within MPMX20_03051at 3194.284 kb on - strand, within MPMX20_03051at 3194.350 kb on - strand, within MPMX20_03051at 3194.419 kb on - strand, within MPMX20_03051at 3194.421 kb on + strand, within MPMX20_03051at 3194.421 kb on + strand, within MPMX20_03051at 3194.489 kb on + strandat 3194.497 kb on - strandat 3194.523 kb on + strandat 3194.523 kb on + strandat 3194.531 kb on - strandat 3194.531 kb on - strandat 3194.575 kb on + strandat 3194.575 kb on + strandat 3194.578 kb on - strandat 3194.588 kb on + strandat 3194.588 kb on - strandat 3194.607 kb on - strandat 3194.614 kb on - strandat 3194.820 kb on - strand, within MPMX20_03052at 3194.847 kb on + strand, within MPMX20_03052at 3194.847 kb on + strand, within MPMX20_03052at 3194.849 kb on - strand, within MPMX20_03052at 3194.850 kb on - strand, within MPMX20_03052at 3194.854 kb on + strand, within MPMX20_03052at 3194.854 kb on + strand, within MPMX20_03052at 3194.862 kb on - strand, within MPMX20_03052at 3194.862 kb on - strand, within MPMX20_03052at 3194.862 kb on - strand, within MPMX20_03052at 3194.862 kb on - strand, within MPMX20_03052at 3194.863 kb on + strand, within MPMX20_03052at 3194.866 kb on + strand, within MPMX20_03052at 3194.873 kb on + strand, within MPMX20_03052at 3194.873 kb on + strand, within MPMX20_03052at 3194.873 kb on + strand, within MPMX20_03052at 3194.874 kb on - strand, within MPMX20_03052at 3194.881 kb on - strand, within MPMX20_03052at 3194.881 kb on - strand, within MPMX20_03052at 3194.910 kb on + strand, within MPMX20_03052at 3194.921 kb on + strand, within MPMX20_03052at 3194.925 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.931 kb on + strand, within MPMX20_03052at 3194.932 kb on + strand, within MPMX20_03052at 3194.933 kb on - strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.936 kb on + strand, within MPMX20_03052at 3194.939 kb on - strand, within MPMX20_03052at 3194.939 kb on - strand, within MPMX20_03052at 3194.939 kb on - strand, within MPMX20_03052at 3194.939 kb on - strand, within MPMX20_03052at 3194.939 kb on - strand, within MPMX20_03052at 3194.939 kb on - strand, within MPMX20_03052at 3194.939 kb on - strand, within MPMX20_03052at 3194.941 kb on - strand, within MPMX20_03052at 3194.944 kb on - strand, within MPMX20_03052at 3194.944 kb on - strand, within MPMX20_03052at 3194.944 kb on - strand, within MPMX20_03052at 3194.944 kb on - strand, within MPMX20_03052at 3194.944 kb on - strand, within MPMX20_03052at 3194.946 kb on + strand, within MPMX20_03052at 3194.946 kb on + strand, within MPMX20_03052at 3194.946 kb on + strand, within MPMX20_03052at 3194.946 kb on + strand, within MPMX20_03052at 3194.954 kb on - strand, within MPMX20_03052at 3194.972 kb on + strand, within MPMX20_03052at 3194.976 kb on + strand, within MPMX20_03052at 3194.976 kb on + strand, within MPMX20_03052at 3194.978 kb on + strand, within MPMX20_03052at 3194.978 kb on + strand, within MPMX20_03052at 3194.978 kb on + strand, within MPMX20_03052at 3194.987 kb on + strand, within MPMX20_03052at 3194.995 kb on - strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3194.997 kb on + strand, within MPMX20_03052at 3195.005 kb on - strand, within MPMX20_03052at 3195.005 kb on - strand, within MPMX20_03052at 3195.005 kb on - strand, within MPMX20_03052at 3195.005 kb on - strand, within MPMX20_03052at 3195.005 kb on - strand, within MPMX20_03052at 3195.011 kb on + strand, within MPMX20_03052at 3195.012 kb on + strand, within MPMX20_03052at 3195.012 kb on + strand, within MPMX20_03052at 3195.020 kb on - strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.022 kb on + strand, within MPMX20_03052at 3195.024 kb on - strand, within MPMX20_03052at 3195.030 kb on - strand, within MPMX20_03052at 3195.030 kb on - strand, within MPMX20_03052at 3195.030 kb on - strand, within MPMX20_03052at 3195.032 kb on + strand, within MPMX20_03052at 3195.032 kb on + strand, within MPMX20_03052at 3195.032 kb on + strand, within MPMX20_03052at 3195.032 kb on + strand, within MPMX20_03052at 3195.034 kb on + strand, within MPMX20_03052at 3195.044 kb on + strand, within MPMX20_03052at 3195.044 kb on + strand, within MPMX20_03052at 3195.044 kb on + strand, within MPMX20_03052at 3195.044 kb on + strand, within MPMX20_03052at 3195.044 kb on + strand, within MPMX20_03052at 3195.044 kb on - strand, within MPMX20_03052at 3195.049 kb on + strand, within MPMX20_03052at 3195.059 kb on + strand, within MPMX20_03052at 3195.066 kb on + strand, within MPMX20_03052at 3195.066 kb on + strand, within MPMX20_03052at 3195.066 kb on + strand, within MPMX20_03052at 3195.066 kb on + strand, within MPMX20_03052at 3195.066 kb on + strand, within MPMX20_03052at 3195.066 kb on + strand, within MPMX20_03052at 3195.096 kb on - strand, within MPMX20_03052at 3195.121 kb on + strand, within MPMX20_03052at 3195.121 kb on + strand, within MPMX20_03052at 3195.192 kb on + strand, within MPMX20_03052at 3195.200 kb on + strand, within MPMX20_03052at 3195.200 kb on + strand, within MPMX20_03052at 3195.200 kb on + strand, within MPMX20_03052at 3195.200 kb on + strand, within MPMX20_03052at 3195.202 kb on + strand, within MPMX20_03052at 3195.539 kb on - strand, within MPMX20_03052at 3195.789 kb on + strand, within MPMX20_03052at 3195.789 kb on + strand, within MPMX20_03052at 3195.797 kb on + strand, within MPMX20_03052at 3195.797 kb on + strand, within MPMX20_03052at 3195.797 kb on + strand, within MPMX20_03052at 3195.834 kb on - strand, within MPMX20_03052at 3195.834 kb on - strand, within MPMX20_03052at 3196.516 kb on + strandat 3196.516 kb on + strandat 3196.872 kb on + strand, within MPMX20_03053at 3196.877 kb on + strand, within MPMX20_03053

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,193,652 - MPMX20_03051 0.29 -0.4
3,193,710 + MPMX20_03051 0.33 +0.3
3,193,710 + MPMX20_03051 0.33 +1.4
3,193,734 + MPMX20_03051 0.35 +1.2
3,193,741 + MPMX20_03051 0.36 -0.2
3,193,741 + MPMX20_03051 0.36 -1.4
3,193,779 - MPMX20_03051 0.39 +0.3
3,193,830 + MPMX20_03051 0.42 +0.6
3,193,875 - MPMX20_03051 0.46 +1.0
3,193,879 + MPMX20_03051 0.46 -1.1
3,194,106 + MPMX20_03051 0.63 +1.2
3,194,201 - MPMX20_03051 0.70 +0.6
3,194,229 + MPMX20_03051 0.72 +0.4
3,194,229 + MPMX20_03051 0.72 -0.5
3,194,229 + MPMX20_03051 0.72 +3.6
3,194,229 + MPMX20_03051 0.72 -0.1
3,194,237 - MPMX20_03051 0.72 +0.2
3,194,237 - MPMX20_03051 0.72 -0.4
3,194,237 - MPMX20_03051 0.72 +0.7
3,194,276 + MPMX20_03051 0.75 +1.0
3,194,276 + MPMX20_03051 0.75 +1.0
3,194,276 + MPMX20_03051 0.75 +0.3
3,194,284 - MPMX20_03051 0.76 +0.3
3,194,284 - MPMX20_03051 0.76 -0.4
3,194,284 - MPMX20_03051 0.76 +0.0
3,194,284 - MPMX20_03051 0.76 +1.2
3,194,350 - MPMX20_03051 0.81 +0.7
3,194,419 - MPMX20_03051 0.86 -1.2
3,194,421 + MPMX20_03051 0.86 +0.2
3,194,421 + MPMX20_03051 0.86 -0.2
3,194,489 + +0.1
3,194,497 - -0.1
3,194,523 + -0.1
3,194,523 + +1.4
3,194,531 - -0.7
3,194,531 - -0.0
3,194,575 + -0.6
3,194,575 + -2.2
3,194,578 - -1.4
3,194,588 + -0.3
3,194,588 - -1.0
3,194,607 - -1.4
3,194,614 - -0.1
3,194,820 - MPMX20_03052 0.11 +0.1
3,194,847 + MPMX20_03052 0.13 -0.4
3,194,847 + MPMX20_03052 0.13 +0.0
3,194,849 - MPMX20_03052 0.13 +1.3
3,194,850 - MPMX20_03052 0.13 +0.2
3,194,854 + MPMX20_03052 0.13 +0.6
3,194,854 + MPMX20_03052 0.13 +0.5
3,194,862 - MPMX20_03052 0.14 -0.8
3,194,862 - MPMX20_03052 0.14 -0.4
3,194,862 - MPMX20_03052 0.14 -0.2
3,194,862 - MPMX20_03052 0.14 -0.7
3,194,863 + MPMX20_03052 0.14 +0.0
3,194,866 + MPMX20_03052 0.14 +1.1
3,194,873 + MPMX20_03052 0.15 +0.5
3,194,873 + MPMX20_03052 0.15 +1.0
3,194,873 + MPMX20_03052 0.15 +7.2
3,194,874 - MPMX20_03052 0.15 -1.6
3,194,881 - MPMX20_03052 0.15 -0.0
3,194,881 - MPMX20_03052 0.15 +1.2
3,194,910 + MPMX20_03052 0.17 +0.7
3,194,921 + MPMX20_03052 0.18 -0.9
3,194,925 + MPMX20_03052 0.18 -0.5
3,194,931 + MPMX20_03052 0.19 +5.9
3,194,931 + MPMX20_03052 0.19 +3.3
3,194,931 + MPMX20_03052 0.19 +0.6
3,194,931 + MPMX20_03052 0.19 +1.1
3,194,931 + MPMX20_03052 0.19 +0.7
3,194,931 + MPMX20_03052 0.19 -0.3
3,194,931 + MPMX20_03052 0.19 +0.8
3,194,931 + MPMX20_03052 0.19 -1.1
3,194,931 + MPMX20_03052 0.19 -1.0
3,194,931 + MPMX20_03052 0.19 -0.2
3,194,931 + MPMX20_03052 0.19 +0.4
3,194,931 + MPMX20_03052 0.19 -0.6
3,194,931 + MPMX20_03052 0.19 -2.5
3,194,931 + MPMX20_03052 0.19 +1.0
3,194,931 + MPMX20_03052 0.19 +0.2
3,194,931 + MPMX20_03052 0.19 -1.0
3,194,931 + MPMX20_03052 0.19 +0.8
3,194,931 + MPMX20_03052 0.19 +0.2
3,194,932 + MPMX20_03052 0.19 +0.2
3,194,933 - MPMX20_03052 0.19 +0.2
3,194,936 + MPMX20_03052 0.19 -0.4
3,194,936 + MPMX20_03052 0.19 -0.1
3,194,936 + MPMX20_03052 0.19 +0.3
3,194,936 + MPMX20_03052 0.19 +0.9
3,194,936 + MPMX20_03052 0.19 -0.7
3,194,936 + MPMX20_03052 0.19 +0.1
3,194,936 + MPMX20_03052 0.19 +0.4
3,194,936 + MPMX20_03052 0.19 +0.2
3,194,936 + MPMX20_03052 0.19 +2.6
3,194,936 + MPMX20_03052 0.19 -0.7
3,194,936 + MPMX20_03052 0.19 -0.1
3,194,936 + MPMX20_03052 0.19 +1.8
3,194,939 - MPMX20_03052 0.19 -0.1
3,194,939 - MPMX20_03052 0.19 +2.4
3,194,939 - MPMX20_03052 0.19 -0.7
3,194,939 - MPMX20_03052 0.19 +0.1
3,194,939 - MPMX20_03052 0.19 -1.6
3,194,939 - MPMX20_03052 0.19 +1.1
3,194,939 - MPMX20_03052 0.19 +0.1
3,194,941 - MPMX20_03052 0.19 -2.5
3,194,944 - MPMX20_03052 0.19 -0.0
3,194,944 - MPMX20_03052 0.19 +0.9
3,194,944 - MPMX20_03052 0.19 +1.2
3,194,944 - MPMX20_03052 0.19 +0.7
3,194,944 - MPMX20_03052 0.19 +0.0
3,194,946 + MPMX20_03052 0.20 -0.5
3,194,946 + MPMX20_03052 0.20 -0.0
3,194,946 + MPMX20_03052 0.20 -0.5
3,194,946 + MPMX20_03052 0.20 +0.5
3,194,954 - MPMX20_03052 0.20 -0.4
3,194,972 + MPMX20_03052 0.21 +1.6
3,194,976 + MPMX20_03052 0.22 -1.7
3,194,976 + MPMX20_03052 0.22 +1.2
3,194,978 + MPMX20_03052 0.22 -0.7
3,194,978 + MPMX20_03052 0.22 -0.1
3,194,978 + MPMX20_03052 0.22 -0.4
3,194,987 + MPMX20_03052 0.22 +1.3
3,194,995 - MPMX20_03052 0.23 -2.1
3,194,997 + MPMX20_03052 0.23 +0.6
3,194,997 + MPMX20_03052 0.23 +0.2
3,194,997 + MPMX20_03052 0.23 +0.2
3,194,997 + MPMX20_03052 0.23 -0.8
3,194,997 + MPMX20_03052 0.23 -1.4
3,194,997 + MPMX20_03052 0.23 +1.3
3,194,997 + MPMX20_03052 0.23 -1.2
3,194,997 + MPMX20_03052 0.23 -0.7
3,194,997 + MPMX20_03052 0.23 +1.2
3,194,997 + MPMX20_03052 0.23 -2.1
3,195,005 - MPMX20_03052 0.24 -0.1
3,195,005 - MPMX20_03052 0.24 +1.6
3,195,005 - MPMX20_03052 0.24 +1.7
3,195,005 - MPMX20_03052 0.24 +2.1
3,195,005 - MPMX20_03052 0.24 +0.6
3,195,011 + MPMX20_03052 0.24 -0.2
3,195,012 + MPMX20_03052 0.24 +1.2
3,195,012 + MPMX20_03052 0.24 -0.7
3,195,020 - MPMX20_03052 0.25 +0.8
3,195,022 + MPMX20_03052 0.25 +1.6
3,195,022 + MPMX20_03052 0.25 -0.7
3,195,022 + MPMX20_03052 0.25 -1.2
3,195,022 + MPMX20_03052 0.25 -2.1
3,195,022 + MPMX20_03052 0.25 -0.0
3,195,022 + MPMX20_03052 0.25 +0.5
3,195,022 + MPMX20_03052 0.25 -1.1
3,195,022 + MPMX20_03052 0.25 +2.4
3,195,022 + MPMX20_03052 0.25 -0.1
3,195,022 + MPMX20_03052 0.25 -0.7
3,195,022 + MPMX20_03052 0.25 -0.4
3,195,022 + MPMX20_03052 0.25 -0.7
3,195,022 + MPMX20_03052 0.25 +4.8
3,195,024 - MPMX20_03052 0.25 +0.9
3,195,030 - MPMX20_03052 0.25 +2.2
3,195,030 - MPMX20_03052 0.25 +4.5
3,195,030 - MPMX20_03052 0.25 -2.4
3,195,032 + MPMX20_03052 0.25 -0.0
3,195,032 + MPMX20_03052 0.25 +2.2
3,195,032 + MPMX20_03052 0.25 +2.2
3,195,032 + MPMX20_03052 0.25 +0.9
3,195,034 + MPMX20_03052 0.25 +0.3
3,195,044 + MPMX20_03052 0.26 -0.7
3,195,044 + MPMX20_03052 0.26 +4.1
3,195,044 + MPMX20_03052 0.26 -0.9
3,195,044 + MPMX20_03052 0.26 +1.3
3,195,044 + MPMX20_03052 0.26 -1.0
3,195,044 - MPMX20_03052 0.26 +1.2
3,195,049 + MPMX20_03052 0.26 -1.3
3,195,059 + MPMX20_03052 0.27 +0.2
3,195,066 + MPMX20_03052 0.28 -0.1
3,195,066 + MPMX20_03052 0.28 +1.9
3,195,066 + MPMX20_03052 0.28 -0.9
3,195,066 + MPMX20_03052 0.28 -2.4
3,195,066 + MPMX20_03052 0.28 -1.7
3,195,066 + MPMX20_03052 0.28 -0.1
3,195,096 - MPMX20_03052 0.30 -2.3
3,195,121 + MPMX20_03052 0.31 -0.2
3,195,121 + MPMX20_03052 0.31 +1.6
3,195,192 + MPMX20_03052 0.36 -0.0
3,195,200 + MPMX20_03052 0.37 +2.1
3,195,200 + MPMX20_03052 0.37 -1.1
3,195,200 + MPMX20_03052 0.37 +1.0
3,195,200 + MPMX20_03052 0.37 -0.8
3,195,202 + MPMX20_03052 0.37 -0.8
3,195,539 - MPMX20_03052 0.59 +0.5
3,195,789 + MPMX20_03052 0.76 +0.2
3,195,789 + MPMX20_03052 0.76 +1.8
3,195,797 + MPMX20_03052 0.76 +1.2
3,195,797 + MPMX20_03052 0.76 -0.8
3,195,797 + MPMX20_03052 0.76 +1.8
3,195,834 - MPMX20_03052 0.79 -1.1
3,195,834 - MPMX20_03052 0.79 -1.2
3,196,516 + -2.0
3,196,516 + +0.9
3,196,872 + MPMX20_03053 0.79 -0.5
3,196,877 + MPMX20_03053 0.80 -0.8

Or see this region's nucleotide sequence