Experiment: 1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03051 and MPMX20_03052 are separated by 41 nucleotides MPMX20_03052 and MPMX20_03053 are separated by 347 nucleotides MPMX20_03053 and MPMX20_03054 overlap by 26 nucleotides
MPMX20_03051: MPMX20_03051 - Chaperone protein DnaK, at 3,193,258 to 3,194,610
_03051
MPMX20_03052: MPMX20_03052 - hypothetical protein, at 3,194,652 to 3,196,151
_03052
MPMX20_03053: MPMX20_03053 - hypothetical protein, at 3,196,499 to 3,196,972
_03053
MPMX20_03054: MPMX20_03054 - hypothetical protein, at 3,196,947 to 3,197,675
_03054
Position (kb)
3194
3195
3196
3197 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 3193.652 kb on - strand, within MPMX20_03051 at 3193.710 kb on + strand, within MPMX20_03051 at 3193.710 kb on + strand, within MPMX20_03051 at 3193.734 kb on + strand, within MPMX20_03051 at 3193.741 kb on + strand, within MPMX20_03051 at 3193.741 kb on + strand, within MPMX20_03051 at 3193.779 kb on - strand, within MPMX20_03051 at 3193.830 kb on + strand, within MPMX20_03051 at 3193.875 kb on - strand, within MPMX20_03051 at 3193.879 kb on + strand, within MPMX20_03051 at 3194.106 kb on + strand, within MPMX20_03051 at 3194.201 kb on - strand, within MPMX20_03051 at 3194.229 kb on + strand, within MPMX20_03051 at 3194.229 kb on + strand, within MPMX20_03051 at 3194.229 kb on + strand, within MPMX20_03051 at 3194.229 kb on + strand, within MPMX20_03051 at 3194.237 kb on - strand, within MPMX20_03051 at 3194.237 kb on - strand, within MPMX20_03051 at 3194.237 kb on - strand, within MPMX20_03051 at 3194.276 kb on + strand, within MPMX20_03051 at 3194.276 kb on + strand, within MPMX20_03051 at 3194.276 kb on + strand, within MPMX20_03051 at 3194.284 kb on - strand, within MPMX20_03051 at 3194.284 kb on - strand, within MPMX20_03051 at 3194.284 kb on - strand, within MPMX20_03051 at 3194.284 kb on - strand, within MPMX20_03051 at 3194.350 kb on - strand, within MPMX20_03051 at 3194.419 kb on - strand, within MPMX20_03051 at 3194.421 kb on + strand, within MPMX20_03051 at 3194.421 kb on + strand, within MPMX20_03051 at 3194.489 kb on + strand at 3194.497 kb on - strand at 3194.523 kb on + strand at 3194.523 kb on + strand at 3194.531 kb on - strand at 3194.531 kb on - strand at 3194.575 kb on + strand at 3194.575 kb on + strand at 3194.578 kb on - strand at 3194.588 kb on + strand at 3194.588 kb on - strand at 3194.607 kb on - strand at 3194.614 kb on - strand at 3194.820 kb on - strand, within MPMX20_03052 at 3194.847 kb on + strand, within MPMX20_03052 at 3194.847 kb on + strand, within MPMX20_03052 at 3194.849 kb on - strand, within MPMX20_03052 at 3194.850 kb on - strand, within MPMX20_03052 at 3194.854 kb on + strand, within MPMX20_03052 at 3194.854 kb on + strand, within MPMX20_03052 at 3194.862 kb on - strand, within MPMX20_03052 at 3194.862 kb on - strand, within MPMX20_03052 at 3194.862 kb on - strand, within MPMX20_03052 at 3194.862 kb on - strand, within MPMX20_03052 at 3194.863 kb on + strand, within MPMX20_03052 at 3194.866 kb on + strand, within MPMX20_03052 at 3194.873 kb on + strand, within MPMX20_03052 at 3194.873 kb on + strand, within MPMX20_03052 at 3194.873 kb on + strand, within MPMX20_03052 at 3194.874 kb on - strand, within MPMX20_03052 at 3194.881 kb on - strand, within MPMX20_03052 at 3194.881 kb on - strand, within MPMX20_03052 at 3194.910 kb on + strand, within MPMX20_03052 at 3194.921 kb on + strand, within MPMX20_03052 at 3194.925 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.931 kb on + strand, within MPMX20_03052 at 3194.932 kb on + strand, within MPMX20_03052 at 3194.933 kb on - strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.936 kb on + strand, within MPMX20_03052 at 3194.939 kb on - strand, within MPMX20_03052 at 3194.939 kb on - strand, within MPMX20_03052 at 3194.939 kb on - strand, within MPMX20_03052 at 3194.939 kb on - strand, within MPMX20_03052 at 3194.939 kb on - strand, within MPMX20_03052 at 3194.939 kb on - strand, within MPMX20_03052 at 3194.939 kb on - strand, within MPMX20_03052 at 3194.941 kb on - strand, within MPMX20_03052 at 3194.944 kb on - strand, within MPMX20_03052 at 3194.944 kb on - strand, within MPMX20_03052 at 3194.944 kb on - strand, within MPMX20_03052 at 3194.944 kb on - strand, within MPMX20_03052 at 3194.944 kb on - strand, within MPMX20_03052 at 3194.946 kb on + strand, within MPMX20_03052 at 3194.946 kb on + strand, within MPMX20_03052 at 3194.946 kb on + strand, within MPMX20_03052 at 3194.946 kb on + strand, within MPMX20_03052 at 3194.954 kb on - strand, within MPMX20_03052 at 3194.972 kb on + strand, within MPMX20_03052 at 3194.976 kb on + strand, within MPMX20_03052 at 3194.976 kb on + strand, within MPMX20_03052 at 3194.978 kb on + strand, within MPMX20_03052 at 3194.978 kb on + strand, within MPMX20_03052 at 3194.978 kb on + strand, within MPMX20_03052 at 3194.987 kb on + strand, within MPMX20_03052 at 3194.995 kb on - strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3194.997 kb on + strand, within MPMX20_03052 at 3195.005 kb on - strand, within MPMX20_03052 at 3195.005 kb on - strand, within MPMX20_03052 at 3195.005 kb on - strand, within MPMX20_03052 at 3195.005 kb on - strand, within MPMX20_03052 at 3195.005 kb on - strand, within MPMX20_03052 at 3195.011 kb on + strand, within MPMX20_03052 at 3195.012 kb on + strand, within MPMX20_03052 at 3195.012 kb on + strand, within MPMX20_03052 at 3195.020 kb on - strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.022 kb on + strand, within MPMX20_03052 at 3195.024 kb on - strand, within MPMX20_03052 at 3195.030 kb on - strand, within MPMX20_03052 at 3195.030 kb on - strand, within MPMX20_03052 at 3195.030 kb on - strand, within MPMX20_03052 at 3195.032 kb on + strand, within MPMX20_03052 at 3195.032 kb on + strand, within MPMX20_03052 at 3195.032 kb on + strand, within MPMX20_03052 at 3195.032 kb on + strand, within MPMX20_03052 at 3195.034 kb on + strand, within MPMX20_03052 at 3195.044 kb on + strand, within MPMX20_03052 at 3195.044 kb on + strand, within MPMX20_03052 at 3195.044 kb on + strand, within MPMX20_03052 at 3195.044 kb on + strand, within MPMX20_03052 at 3195.044 kb on + strand, within MPMX20_03052 at 3195.044 kb on - strand, within MPMX20_03052 at 3195.049 kb on + strand, within MPMX20_03052 at 3195.059 kb on + strand, within MPMX20_03052 at 3195.066 kb on + strand, within MPMX20_03052 at 3195.066 kb on + strand, within MPMX20_03052 at 3195.066 kb on + strand, within MPMX20_03052 at 3195.066 kb on + strand, within MPMX20_03052 at 3195.066 kb on + strand, within MPMX20_03052 at 3195.066 kb on + strand, within MPMX20_03052 at 3195.096 kb on - strand, within MPMX20_03052 at 3195.121 kb on + strand, within MPMX20_03052 at 3195.121 kb on + strand, within MPMX20_03052 at 3195.192 kb on + strand, within MPMX20_03052 at 3195.200 kb on + strand, within MPMX20_03052 at 3195.200 kb on + strand, within MPMX20_03052 at 3195.200 kb on + strand, within MPMX20_03052 at 3195.200 kb on + strand, within MPMX20_03052 at 3195.202 kb on + strand, within MPMX20_03052 at 3195.539 kb on - strand, within MPMX20_03052 at 3195.789 kb on + strand, within MPMX20_03052 at 3195.789 kb on + strand, within MPMX20_03052 at 3195.797 kb on + strand, within MPMX20_03052 at 3195.797 kb on + strand, within MPMX20_03052 at 3195.797 kb on + strand, within MPMX20_03052 at 3195.834 kb on - strand, within MPMX20_03052 at 3195.834 kb on - strand, within MPMX20_03052 at 3196.516 kb on + strand at 3196.516 kb on + strand at 3196.872 kb on + strand, within MPMX20_03053 at 3196.877 kb on + strand, within MPMX20_03053
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,193,652 - MPMX20_03051 0.29 -0.4 3,193,710 + MPMX20_03051 0.33 +0.3 3,193,710 + MPMX20_03051 0.33 +1.4 3,193,734 + MPMX20_03051 0.35 +1.2 3,193,741 + MPMX20_03051 0.36 -0.2 3,193,741 + MPMX20_03051 0.36 -1.4 3,193,779 - MPMX20_03051 0.39 +0.3 3,193,830 + MPMX20_03051 0.42 +0.6 3,193,875 - MPMX20_03051 0.46 +1.0 3,193,879 + MPMX20_03051 0.46 -1.1 3,194,106 + MPMX20_03051 0.63 +1.2 3,194,201 - MPMX20_03051 0.70 +0.6 3,194,229 + MPMX20_03051 0.72 +0.4 3,194,229 + MPMX20_03051 0.72 -0.5 3,194,229 + MPMX20_03051 0.72 +3.6 3,194,229 + MPMX20_03051 0.72 -0.1 3,194,237 - MPMX20_03051 0.72 +0.2 3,194,237 - MPMX20_03051 0.72 -0.4 3,194,237 - MPMX20_03051 0.72 +0.7 3,194,276 + MPMX20_03051 0.75 +1.0 3,194,276 + MPMX20_03051 0.75 +1.0 3,194,276 + MPMX20_03051 0.75 +0.3 3,194,284 - MPMX20_03051 0.76 +0.3 3,194,284 - MPMX20_03051 0.76 -0.4 3,194,284 - MPMX20_03051 0.76 +0.0 3,194,284 - MPMX20_03051 0.76 +1.2 3,194,350 - MPMX20_03051 0.81 +0.7 3,194,419 - MPMX20_03051 0.86 -1.2 3,194,421 + MPMX20_03051 0.86 +0.2 3,194,421 + MPMX20_03051 0.86 -0.2 3,194,489 + +0.1 3,194,497 - -0.1 3,194,523 + -0.1 3,194,523 + +1.4 3,194,531 - -0.7 3,194,531 - -0.0 3,194,575 + -0.6 3,194,575 + -2.2 3,194,578 - -1.4 3,194,588 + -0.3 3,194,588 - -1.0 3,194,607 - -1.4 3,194,614 - -0.1 3,194,820 - MPMX20_03052 0.11 +0.1 3,194,847 + MPMX20_03052 0.13 -0.4 3,194,847 + MPMX20_03052 0.13 +0.0 3,194,849 - MPMX20_03052 0.13 +1.3 3,194,850 - MPMX20_03052 0.13 +0.2 3,194,854 + MPMX20_03052 0.13 +0.6 3,194,854 + MPMX20_03052 0.13 +0.5 3,194,862 - MPMX20_03052 0.14 -0.8 3,194,862 - MPMX20_03052 0.14 -0.4 3,194,862 - MPMX20_03052 0.14 -0.2 3,194,862 - MPMX20_03052 0.14 -0.7 3,194,863 + MPMX20_03052 0.14 +0.0 3,194,866 + MPMX20_03052 0.14 +1.1 3,194,873 + MPMX20_03052 0.15 +0.5 3,194,873 + MPMX20_03052 0.15 +1.0 3,194,873 + MPMX20_03052 0.15 +7.2 3,194,874 - MPMX20_03052 0.15 -1.6 3,194,881 - MPMX20_03052 0.15 -0.0 3,194,881 - MPMX20_03052 0.15 +1.2 3,194,910 + MPMX20_03052 0.17 +0.7 3,194,921 + MPMX20_03052 0.18 -0.9 3,194,925 + MPMX20_03052 0.18 -0.5 3,194,931 + MPMX20_03052 0.19 +5.9 3,194,931 + MPMX20_03052 0.19 +3.3 3,194,931 + MPMX20_03052 0.19 +0.6 3,194,931 + MPMX20_03052 0.19 +1.1 3,194,931 + MPMX20_03052 0.19 +0.7 3,194,931 + MPMX20_03052 0.19 -0.3 3,194,931 + MPMX20_03052 0.19 +0.8 3,194,931 + MPMX20_03052 0.19 -1.1 3,194,931 + MPMX20_03052 0.19 -1.0 3,194,931 + MPMX20_03052 0.19 -0.2 3,194,931 + MPMX20_03052 0.19 +0.4 3,194,931 + MPMX20_03052 0.19 -0.6 3,194,931 + MPMX20_03052 0.19 -2.5 3,194,931 + MPMX20_03052 0.19 +1.0 3,194,931 + MPMX20_03052 0.19 +0.2 3,194,931 + MPMX20_03052 0.19 -1.0 3,194,931 + MPMX20_03052 0.19 +0.8 3,194,931 + MPMX20_03052 0.19 +0.2 3,194,932 + MPMX20_03052 0.19 +0.2 3,194,933 - MPMX20_03052 0.19 +0.2 3,194,936 + MPMX20_03052 0.19 -0.4 3,194,936 + MPMX20_03052 0.19 -0.1 3,194,936 + MPMX20_03052 0.19 +0.3 3,194,936 + MPMX20_03052 0.19 +0.9 3,194,936 + MPMX20_03052 0.19 -0.7 3,194,936 + MPMX20_03052 0.19 +0.1 3,194,936 + MPMX20_03052 0.19 +0.4 3,194,936 + MPMX20_03052 0.19 +0.2 3,194,936 + MPMX20_03052 0.19 +2.6 3,194,936 + MPMX20_03052 0.19 -0.7 3,194,936 + MPMX20_03052 0.19 -0.1 3,194,936 + MPMX20_03052 0.19 +1.8 3,194,939 - MPMX20_03052 0.19 -0.1 3,194,939 - MPMX20_03052 0.19 +2.4 3,194,939 - MPMX20_03052 0.19 -0.7 3,194,939 - MPMX20_03052 0.19 +0.1 3,194,939 - MPMX20_03052 0.19 -1.6 3,194,939 - MPMX20_03052 0.19 +1.1 3,194,939 - MPMX20_03052 0.19 +0.1 3,194,941 - MPMX20_03052 0.19 -2.5 3,194,944 - MPMX20_03052 0.19 -0.0 3,194,944 - MPMX20_03052 0.19 +0.9 3,194,944 - MPMX20_03052 0.19 +1.2 3,194,944 - MPMX20_03052 0.19 +0.7 3,194,944 - MPMX20_03052 0.19 +0.0 3,194,946 + MPMX20_03052 0.20 -0.5 3,194,946 + MPMX20_03052 0.20 -0.0 3,194,946 + MPMX20_03052 0.20 -0.5 3,194,946 + MPMX20_03052 0.20 +0.5 3,194,954 - MPMX20_03052 0.20 -0.4 3,194,972 + MPMX20_03052 0.21 +1.6 3,194,976 + MPMX20_03052 0.22 -1.7 3,194,976 + MPMX20_03052 0.22 +1.2 3,194,978 + MPMX20_03052 0.22 -0.7 3,194,978 + MPMX20_03052 0.22 -0.1 3,194,978 + MPMX20_03052 0.22 -0.4 3,194,987 + MPMX20_03052 0.22 +1.3 3,194,995 - MPMX20_03052 0.23 -2.1 3,194,997 + MPMX20_03052 0.23 +0.6 3,194,997 + MPMX20_03052 0.23 +0.2 3,194,997 + MPMX20_03052 0.23 +0.2 3,194,997 + MPMX20_03052 0.23 -0.8 3,194,997 + MPMX20_03052 0.23 -1.4 3,194,997 + MPMX20_03052 0.23 +1.3 3,194,997 + MPMX20_03052 0.23 -1.2 3,194,997 + MPMX20_03052 0.23 -0.7 3,194,997 + MPMX20_03052 0.23 +1.2 3,194,997 + MPMX20_03052 0.23 -2.1 3,195,005 - MPMX20_03052 0.24 -0.1 3,195,005 - MPMX20_03052 0.24 +1.6 3,195,005 - MPMX20_03052 0.24 +1.7 3,195,005 - MPMX20_03052 0.24 +2.1 3,195,005 - MPMX20_03052 0.24 +0.6 3,195,011 + MPMX20_03052 0.24 -0.2 3,195,012 + MPMX20_03052 0.24 +1.2 3,195,012 + MPMX20_03052 0.24 -0.7 3,195,020 - MPMX20_03052 0.25 +0.8 3,195,022 + MPMX20_03052 0.25 +1.6 3,195,022 + MPMX20_03052 0.25 -0.7 3,195,022 + MPMX20_03052 0.25 -1.2 3,195,022 + MPMX20_03052 0.25 -2.1 3,195,022 + MPMX20_03052 0.25 -0.0 3,195,022 + MPMX20_03052 0.25 +0.5 3,195,022 + MPMX20_03052 0.25 -1.1 3,195,022 + MPMX20_03052 0.25 +2.4 3,195,022 + MPMX20_03052 0.25 -0.1 3,195,022 + MPMX20_03052 0.25 -0.7 3,195,022 + MPMX20_03052 0.25 -0.4 3,195,022 + MPMX20_03052 0.25 -0.7 3,195,022 + MPMX20_03052 0.25 +4.8 3,195,024 - MPMX20_03052 0.25 +0.9 3,195,030 - MPMX20_03052 0.25 +2.2 3,195,030 - MPMX20_03052 0.25 +4.5 3,195,030 - MPMX20_03052 0.25 -2.4 3,195,032 + MPMX20_03052 0.25 -0.0 3,195,032 + MPMX20_03052 0.25 +2.2 3,195,032 + MPMX20_03052 0.25 +2.2 3,195,032 + MPMX20_03052 0.25 +0.9 3,195,034 + MPMX20_03052 0.25 +0.3 3,195,044 + MPMX20_03052 0.26 -0.7 3,195,044 + MPMX20_03052 0.26 +4.1 3,195,044 + MPMX20_03052 0.26 -0.9 3,195,044 + MPMX20_03052 0.26 +1.3 3,195,044 + MPMX20_03052 0.26 -1.0 3,195,044 - MPMX20_03052 0.26 +1.2 3,195,049 + MPMX20_03052 0.26 -1.3 3,195,059 + MPMX20_03052 0.27 +0.2 3,195,066 + MPMX20_03052 0.28 -0.1 3,195,066 + MPMX20_03052 0.28 +1.9 3,195,066 + MPMX20_03052 0.28 -0.9 3,195,066 + MPMX20_03052 0.28 -2.4 3,195,066 + MPMX20_03052 0.28 -1.7 3,195,066 + MPMX20_03052 0.28 -0.1 3,195,096 - MPMX20_03052 0.30 -2.3 3,195,121 + MPMX20_03052 0.31 -0.2 3,195,121 + MPMX20_03052 0.31 +1.6 3,195,192 + MPMX20_03052 0.36 -0.0 3,195,200 + MPMX20_03052 0.37 +2.1 3,195,200 + MPMX20_03052 0.37 -1.1 3,195,200 + MPMX20_03052 0.37 +1.0 3,195,200 + MPMX20_03052 0.37 -0.8 3,195,202 + MPMX20_03052 0.37 -0.8 3,195,539 - MPMX20_03052 0.59 +0.5 3,195,789 + MPMX20_03052 0.76 +0.2 3,195,789 + MPMX20_03052 0.76 +1.8 3,195,797 + MPMX20_03052 0.76 +1.2 3,195,797 + MPMX20_03052 0.76 -0.8 3,195,797 + MPMX20_03052 0.76 +1.8 3,195,834 - MPMX20_03052 0.79 -1.1 3,195,834 - MPMX20_03052 0.79 -1.2 3,196,516 + -2.0 3,196,516 + +0.9 3,196,872 + MPMX20_03053 0.79 -0.5 3,196,877 + MPMX20_03053 0.80 -0.8
Or see this region's nucleotide sequence