Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03046

Experiment: 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03045 and MPMX20_03046 are separated by 46 nucleotidesMPMX20_03046 and MPMX20_03047 are separated by 22 nucleotidesMPMX20_03047 and MPMX20_03048 are separated by 91 nucleotides MPMX20_03045: MPMX20_03045 - hypothetical protein, at 3,183,800 to 3,185,383 _03045 MPMX20_03046: MPMX20_03046 - hypothetical protein, at 3,185,430 to 3,187,280 _03046 MPMX20_03047: MPMX20_03047 - dCTP deaminase, at 3,187,303 to 3,187,884 _03047 MPMX20_03048: MPMX20_03048 - Uridine kinase, at 3,187,976 to 3,188,617 _03048 Position (kb) 3185 3186 3187 3188Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5 6at 3184.433 kb on + strand, within MPMX20_03045at 3184.441 kb on - strand, within MPMX20_03045at 3184.523 kb on + strand, within MPMX20_03045at 3184.540 kb on + strand, within MPMX20_03045at 3184.564 kb on - strand, within MPMX20_03045at 3184.703 kb on + strand, within MPMX20_03045at 3184.716 kb on + strand, within MPMX20_03045at 3184.755 kb on + strand, within MPMX20_03045at 3184.776 kb on - strand, within MPMX20_03045at 3184.808 kb on - strand, within MPMX20_03045at 3184.819 kb on - strand, within MPMX20_03045at 3184.853 kb on - strand, within MPMX20_03045at 3184.856 kb on - strand, within MPMX20_03045at 3184.858 kb on - strand, within MPMX20_03045at 3184.967 kb on - strand, within MPMX20_03045at 3184.969 kb on - strand, within MPMX20_03045at 3185.148 kb on + strand, within MPMX20_03045at 3185.148 kb on + strand, within MPMX20_03045at 3185.156 kb on - strand, within MPMX20_03045at 3185.161 kb on + strand, within MPMX20_03045at 3185.258 kb on - strandat 3185.301 kb on - strandat 3185.327 kb on - strandat 3185.339 kb on - strandat 3185.363 kb on + strandat 3185.385 kb on - strandat 3185.428 kb on + strandat 3185.428 kb on + strandat 3185.477 kb on - strandat 3185.541 kb on + strandat 3185.558 kb on + strandat 3185.591 kb on - strandat 3185.608 kb on - strandat 3185.642 kb on - strand, within MPMX20_03046at 3185.642 kb on - strand, within MPMX20_03046at 3185.729 kb on + strand, within MPMX20_03046at 3185.732 kb on + strand, within MPMX20_03046at 3185.740 kb on - strand, within MPMX20_03046at 3185.758 kb on + strand, within MPMX20_03046at 3185.766 kb on - strand, within MPMX20_03046at 3185.792 kb on + strand, within MPMX20_03046at 3185.794 kb on - strand, within MPMX20_03046at 3185.869 kb on - strand, within MPMX20_03046at 3185.893 kb on - strand, within MPMX20_03046at 3185.915 kb on + strand, within MPMX20_03046at 3185.974 kb on + strand, within MPMX20_03046at 3186.031 kb on + strand, within MPMX20_03046at 3186.032 kb on - strand, within MPMX20_03046at 3186.039 kb on - strand, within MPMX20_03046at 3186.049 kb on + strand, within MPMX20_03046at 3186.104 kb on + strand, within MPMX20_03046at 3186.104 kb on + strand, within MPMX20_03046at 3186.112 kb on - strand, within MPMX20_03046at 3186.112 kb on - strand, within MPMX20_03046at 3186.155 kb on + strand, within MPMX20_03046at 3186.163 kb on - strand, within MPMX20_03046at 3186.212 kb on + strand, within MPMX20_03046at 3186.260 kb on - strand, within MPMX20_03046at 3186.275 kb on + strand, within MPMX20_03046at 3186.277 kb on + strand, within MPMX20_03046at 3186.277 kb on + strand, within MPMX20_03046at 3186.283 kb on - strand, within MPMX20_03046at 3186.286 kb on - strand, within MPMX20_03046at 3186.287 kb on - strand, within MPMX20_03046at 3186.336 kb on + strand, within MPMX20_03046at 3186.345 kb on + strand, within MPMX20_03046at 3186.353 kb on - strand, within MPMX20_03046at 3186.355 kb on + strand, within MPMX20_03046at 3186.355 kb on + strand, within MPMX20_03046at 3186.355 kb on + strand, within MPMX20_03046at 3186.363 kb on - strand, within MPMX20_03046at 3186.457 kb on - strand, within MPMX20_03046at 3186.473 kb on - strand, within MPMX20_03046at 3186.473 kb on - strand, within MPMX20_03046at 3186.491 kb on - strand, within MPMX20_03046at 3186.500 kb on + strand, within MPMX20_03046at 3186.513 kb on - strand, within MPMX20_03046at 3186.513 kb on - strand, within MPMX20_03046at 3186.556 kb on - strand, within MPMX20_03046at 3186.576 kb on - strand, within MPMX20_03046at 3186.607 kb on - strand, within MPMX20_03046at 3186.638 kb on + strand, within MPMX20_03046at 3186.655 kb on - strand, within MPMX20_03046at 3186.702 kb on + strand, within MPMX20_03046at 3186.703 kb on - strand, within MPMX20_03046at 3186.728 kb on - strand, within MPMX20_03046at 3186.835 kb on - strand, within MPMX20_03046at 3186.925 kb on + strand, within MPMX20_03046at 3186.933 kb on - strand, within MPMX20_03046at 3186.977 kb on - strand, within MPMX20_03046at 3186.979 kb on + strand, within MPMX20_03046at 3186.987 kb on - strand, within MPMX20_03046at 3186.987 kb on - strand, within MPMX20_03046at 3186.989 kb on + strand, within MPMX20_03046at 3187.044 kb on - strand, within MPMX20_03046at 3187.044 kb on - strand, within MPMX20_03046at 3187.044 kb on - strand, within MPMX20_03046at 3187.049 kb on + strand, within MPMX20_03046at 3187.049 kb on + strand, within MPMX20_03046at 3187.049 kb on + strand, within MPMX20_03046at 3187.201 kb on - strandat 3187.215 kb on - strandat 3187.336 kb on - strandat 3187.393 kb on + strand, within MPMX20_03047at 3187.401 kb on + strand, within MPMX20_03047at 3187.409 kb on - strand, within MPMX20_03047at 3187.409 kb on - strand, within MPMX20_03047at 3187.413 kb on - strand, within MPMX20_03047at 3187.460 kb on - strand, within MPMX20_03047at 3187.485 kb on + strand, within MPMX20_03047at 3187.493 kb on - strand, within MPMX20_03047at 3187.495 kb on + strand, within MPMX20_03047at 3187.495 kb on + strand, within MPMX20_03047at 3187.503 kb on - strand, within MPMX20_03047at 3187.573 kb on + strand, within MPMX20_03047at 3187.638 kb on + strand, within MPMX20_03047at 3187.782 kb on + strand, within MPMX20_03047at 3187.790 kb on - strand, within MPMX20_03047at 3187.796 kb on + strand, within MPMX20_03047at 3187.796 kb on + strand, within MPMX20_03047at 3187.814 kb on + strand, within MPMX20_03047at 3187.815 kb on - strand, within MPMX20_03047at 3187.815 kb on - strand, within MPMX20_03047at 3187.834 kb on - strandat 3187.834 kb on - strandat 3187.855 kb on + strandat 3187.863 kb on - strandat 3187.912 kb on + strandat 3187.913 kb on - strandat 3187.913 kb on - strandat 3187.918 kb on + strandat 3187.942 kb on + strandat 3187.947 kb on + strandat 3187.948 kb on + strandat 3187.955 kb on + strandat 3187.956 kb on - strandat 3188.027 kb on + strandat 3188.059 kb on - strand, within MPMX20_03048at 3188.066 kb on - strand, within MPMX20_03048at 3188.114 kb on - strand, within MPMX20_03048at 3188.160 kb on - strand, within MPMX20_03048at 3188.189 kb on + strand, within MPMX20_03048at 3188.227 kb on - strand, within MPMX20_03048at 3188.236 kb on + strand, within MPMX20_03048at 3188.236 kb on + strand, within MPMX20_03048at 3188.236 kb on + strand, within MPMX20_03048at 3188.236 kb on + strand, within MPMX20_03048at 3188.244 kb on - strand, within MPMX20_03048at 3188.244 kb on - strand, within MPMX20_03048

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,184,433 + MPMX20_03045 0.40 -0.5
3,184,441 - MPMX20_03045 0.40 +0.3
3,184,523 + MPMX20_03045 0.46 +0.5
3,184,540 + MPMX20_03045 0.47 +1.1
3,184,564 - MPMX20_03045 0.48 -0.0
3,184,703 + MPMX20_03045 0.57 -0.3
3,184,716 + MPMX20_03045 0.58 +0.1
3,184,755 + MPMX20_03045 0.60 +0.6
3,184,776 - MPMX20_03045 0.62 -0.3
3,184,808 - MPMX20_03045 0.64 +1.7
3,184,819 - MPMX20_03045 0.64 -0.1
3,184,853 - MPMX20_03045 0.66 +0.5
3,184,856 - MPMX20_03045 0.67 -1.3
3,184,858 - MPMX20_03045 0.67 -0.6
3,184,967 - MPMX20_03045 0.74 +0.1
3,184,969 - MPMX20_03045 0.74 -3.4
3,185,148 + MPMX20_03045 0.85 +1.5
3,185,148 + MPMX20_03045 0.85 -0.5
3,185,156 - MPMX20_03045 0.86 +0.3
3,185,161 + MPMX20_03045 0.86 +0.7
3,185,258 - -1.4
3,185,301 - +0.4
3,185,327 - +3.1
3,185,339 - +1.5
3,185,363 + -0.7
3,185,385 - -1.4
3,185,428 + -0.2
3,185,428 + +0.8
3,185,477 - -0.1
3,185,541 + -1.3
3,185,558 + -0.6
3,185,591 - -1.0
3,185,608 - +1.0
3,185,642 - MPMX20_03046 0.11 -0.5
3,185,642 - MPMX20_03046 0.11 -1.0
3,185,729 + MPMX20_03046 0.16 -1.9
3,185,732 + MPMX20_03046 0.16 -1.4
3,185,740 - MPMX20_03046 0.17 +1.0
3,185,758 + MPMX20_03046 0.18 -0.8
3,185,766 - MPMX20_03046 0.18 -0.7
3,185,792 + MPMX20_03046 0.20 -1.6
3,185,794 - MPMX20_03046 0.20 -2.5
3,185,869 - MPMX20_03046 0.24 -0.0
3,185,893 - MPMX20_03046 0.25 -0.3
3,185,915 + MPMX20_03046 0.26 -0.2
3,185,974 + MPMX20_03046 0.29 -1.8
3,186,031 + MPMX20_03046 0.32 -2.4
3,186,032 - MPMX20_03046 0.33 +1.0
3,186,039 - MPMX20_03046 0.33 -1.1
3,186,049 + MPMX20_03046 0.33 -1.4
3,186,104 + MPMX20_03046 0.36 -2.7
3,186,104 + MPMX20_03046 0.36 -2.0
3,186,112 - MPMX20_03046 0.37 -0.0
3,186,112 - MPMX20_03046 0.37 -3.4
3,186,155 + MPMX20_03046 0.39 -3.4
3,186,163 - MPMX20_03046 0.40 +0.2
3,186,212 + MPMX20_03046 0.42 -3.3
3,186,260 - MPMX20_03046 0.45 -1.8
3,186,275 + MPMX20_03046 0.46 -1.5
3,186,277 + MPMX20_03046 0.46 -0.0
3,186,277 + MPMX20_03046 0.46 -3.8
3,186,283 - MPMX20_03046 0.46 -1.2
3,186,286 - MPMX20_03046 0.46 -3.2
3,186,287 - MPMX20_03046 0.46 -0.0
3,186,336 + MPMX20_03046 0.49 -1.2
3,186,345 + MPMX20_03046 0.49 -3.7
3,186,353 - MPMX20_03046 0.50 +0.2
3,186,355 + MPMX20_03046 0.50 -2.6
3,186,355 + MPMX20_03046 0.50 -1.2
3,186,355 + MPMX20_03046 0.50 +1.5
3,186,363 - MPMX20_03046 0.50 -0.6
3,186,457 - MPMX20_03046 0.55 -3.9
3,186,473 - MPMX20_03046 0.56 -2.2
3,186,473 - MPMX20_03046 0.56 -0.8
3,186,491 - MPMX20_03046 0.57 -2.6
3,186,500 + MPMX20_03046 0.58 -2.7
3,186,513 - MPMX20_03046 0.59 -3.9
3,186,513 - MPMX20_03046 0.59 -1.8
3,186,556 - MPMX20_03046 0.61 -2.9
3,186,576 - MPMX20_03046 0.62 -2.8
3,186,607 - MPMX20_03046 0.64 +0.6
3,186,638 + MPMX20_03046 0.65 -1.4
3,186,655 - MPMX20_03046 0.66 -2.4
3,186,702 + MPMX20_03046 0.69 -2.0
3,186,703 - MPMX20_03046 0.69 -1.6
3,186,728 - MPMX20_03046 0.70 -2.9
3,186,835 - MPMX20_03046 0.76 -4.7
3,186,925 + MPMX20_03046 0.81 -3.0
3,186,933 - MPMX20_03046 0.81 -3.9
3,186,977 - MPMX20_03046 0.84 -3.8
3,186,979 + MPMX20_03046 0.84 -1.4
3,186,987 - MPMX20_03046 0.84 -2.9
3,186,987 - MPMX20_03046 0.84 -4.2
3,186,989 + MPMX20_03046 0.84 -3.7
3,187,044 - MPMX20_03046 0.87 -2.2
3,187,044 - MPMX20_03046 0.87 -1.4
3,187,044 - MPMX20_03046 0.87 -0.6
3,187,049 + MPMX20_03046 0.87 -3.0
3,187,049 + MPMX20_03046 0.87 -3.0
3,187,049 + MPMX20_03046 0.87 -0.0
3,187,201 - -2.0
3,187,215 - -4.3
3,187,336 - -0.9
3,187,393 + MPMX20_03047 0.15 -1.4
3,187,401 + MPMX20_03047 0.17 -1.6
3,187,409 - MPMX20_03047 0.18 +0.5
3,187,409 - MPMX20_03047 0.18 -2.4
3,187,413 - MPMX20_03047 0.19 -0.8
3,187,460 - MPMX20_03047 0.27 -0.6
3,187,485 + MPMX20_03047 0.31 +0.3
3,187,493 - MPMX20_03047 0.33 -1.0
3,187,495 + MPMX20_03047 0.33 -1.4
3,187,495 + MPMX20_03047 0.33 -1.6
3,187,503 - MPMX20_03047 0.34 -2.2
3,187,573 + MPMX20_03047 0.46 -3.0
3,187,638 + MPMX20_03047 0.58 -1.5
3,187,782 + MPMX20_03047 0.82 -2.5
3,187,790 - MPMX20_03047 0.84 -1.4
3,187,796 + MPMX20_03047 0.85 -0.8
3,187,796 + MPMX20_03047 0.85 -1.8
3,187,814 + MPMX20_03047 0.88 +2.0
3,187,815 - MPMX20_03047 0.88 -1.4
3,187,815 - MPMX20_03047 0.88 -1.4
3,187,834 - -0.5
3,187,834 - -1.6
3,187,855 + -0.0
3,187,863 - -1.0
3,187,912 + -0.6
3,187,913 - -0.3
3,187,913 - +0.2
3,187,918 + -2.0
3,187,942 + -1.0
3,187,947 + -2.0
3,187,948 + -2.8
3,187,955 + -1.0
3,187,956 - -0.1
3,188,027 + +0.3
3,188,059 - MPMX20_03048 0.13 +2.5
3,188,066 - MPMX20_03048 0.14 +1.0
3,188,114 - MPMX20_03048 0.21 -0.6
3,188,160 - MPMX20_03048 0.29 +0.1
3,188,189 + MPMX20_03048 0.33 -1.0
3,188,227 - MPMX20_03048 0.39 -1.2
3,188,236 + MPMX20_03048 0.40 -0.8
3,188,236 + MPMX20_03048 0.40 -0.7
3,188,236 + MPMX20_03048 0.40 +0.3
3,188,236 + MPMX20_03048 0.40 -1.1
3,188,244 - MPMX20_03048 0.42 +1.0
3,188,244 - MPMX20_03048 0.42 +6.2

Or see this region's nucleotide sequence