Experiment: 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03045 and MPMX20_03046 are separated by 46 nucleotides MPMX20_03046 and MPMX20_03047 are separated by 22 nucleotides MPMX20_03047 and MPMX20_03048 are separated by 91 nucleotides
MPMX20_03045: MPMX20_03045 - hypothetical protein, at 3,183,800 to 3,185,383
_03045
MPMX20_03046: MPMX20_03046 - hypothetical protein, at 3,185,430 to 3,187,280
_03046
MPMX20_03047: MPMX20_03047 - dCTP deaminase, at 3,187,303 to 3,187,884
_03047
MPMX20_03048: MPMX20_03048 - Uridine kinase, at 3,187,976 to 3,188,617
_03048
Position (kb)
3185
3186
3187
3188 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6 at 3184.433 kb on + strand, within MPMX20_03045 at 3184.441 kb on - strand, within MPMX20_03045 at 3184.523 kb on + strand, within MPMX20_03045 at 3184.540 kb on + strand, within MPMX20_03045 at 3184.564 kb on - strand, within MPMX20_03045 at 3184.703 kb on + strand, within MPMX20_03045 at 3184.716 kb on + strand, within MPMX20_03045 at 3184.755 kb on + strand, within MPMX20_03045 at 3184.776 kb on - strand, within MPMX20_03045 at 3184.808 kb on - strand, within MPMX20_03045 at 3184.819 kb on - strand, within MPMX20_03045 at 3184.853 kb on - strand, within MPMX20_03045 at 3184.856 kb on - strand, within MPMX20_03045 at 3184.858 kb on - strand, within MPMX20_03045 at 3184.967 kb on - strand, within MPMX20_03045 at 3184.969 kb on - strand, within MPMX20_03045 at 3185.148 kb on + strand, within MPMX20_03045 at 3185.148 kb on + strand, within MPMX20_03045 at 3185.156 kb on - strand, within MPMX20_03045 at 3185.161 kb on + strand, within MPMX20_03045 at 3185.258 kb on - strand at 3185.301 kb on - strand at 3185.327 kb on - strand at 3185.339 kb on - strand at 3185.363 kb on + strand at 3185.385 kb on - strand at 3185.428 kb on + strand at 3185.428 kb on + strand at 3185.477 kb on - strand at 3185.541 kb on + strand at 3185.558 kb on + strand at 3185.591 kb on - strand at 3185.608 kb on - strand at 3185.642 kb on - strand, within MPMX20_03046 at 3185.642 kb on - strand, within MPMX20_03046 at 3185.729 kb on + strand, within MPMX20_03046 at 3185.732 kb on + strand, within MPMX20_03046 at 3185.740 kb on - strand, within MPMX20_03046 at 3185.758 kb on + strand, within MPMX20_03046 at 3185.766 kb on - strand, within MPMX20_03046 at 3185.792 kb on + strand, within MPMX20_03046 at 3185.794 kb on - strand, within MPMX20_03046 at 3185.869 kb on - strand, within MPMX20_03046 at 3185.893 kb on - strand, within MPMX20_03046 at 3185.915 kb on + strand, within MPMX20_03046 at 3185.974 kb on + strand, within MPMX20_03046 at 3186.031 kb on + strand, within MPMX20_03046 at 3186.032 kb on - strand, within MPMX20_03046 at 3186.039 kb on - strand, within MPMX20_03046 at 3186.049 kb on + strand, within MPMX20_03046 at 3186.104 kb on + strand, within MPMX20_03046 at 3186.104 kb on + strand, within MPMX20_03046 at 3186.112 kb on - strand, within MPMX20_03046 at 3186.112 kb on - strand, within MPMX20_03046 at 3186.155 kb on + strand, within MPMX20_03046 at 3186.163 kb on - strand, within MPMX20_03046 at 3186.212 kb on + strand, within MPMX20_03046 at 3186.260 kb on - strand, within MPMX20_03046 at 3186.275 kb on + strand, within MPMX20_03046 at 3186.277 kb on + strand, within MPMX20_03046 at 3186.277 kb on + strand, within MPMX20_03046 at 3186.283 kb on - strand, within MPMX20_03046 at 3186.286 kb on - strand, within MPMX20_03046 at 3186.287 kb on - strand, within MPMX20_03046 at 3186.336 kb on + strand, within MPMX20_03046 at 3186.345 kb on + strand, within MPMX20_03046 at 3186.353 kb on - strand, within MPMX20_03046 at 3186.355 kb on + strand, within MPMX20_03046 at 3186.355 kb on + strand, within MPMX20_03046 at 3186.355 kb on + strand, within MPMX20_03046 at 3186.363 kb on - strand, within MPMX20_03046 at 3186.457 kb on - strand, within MPMX20_03046 at 3186.473 kb on - strand, within MPMX20_03046 at 3186.473 kb on - strand, within MPMX20_03046 at 3186.491 kb on - strand, within MPMX20_03046 at 3186.500 kb on + strand, within MPMX20_03046 at 3186.513 kb on - strand, within MPMX20_03046 at 3186.513 kb on - strand, within MPMX20_03046 at 3186.556 kb on - strand, within MPMX20_03046 at 3186.576 kb on - strand, within MPMX20_03046 at 3186.607 kb on - strand, within MPMX20_03046 at 3186.638 kb on + strand, within MPMX20_03046 at 3186.655 kb on - strand, within MPMX20_03046 at 3186.702 kb on + strand, within MPMX20_03046 at 3186.703 kb on - strand, within MPMX20_03046 at 3186.728 kb on - strand, within MPMX20_03046 at 3186.835 kb on - strand, within MPMX20_03046 at 3186.925 kb on + strand, within MPMX20_03046 at 3186.933 kb on - strand, within MPMX20_03046 at 3186.977 kb on - strand, within MPMX20_03046 at 3186.979 kb on + strand, within MPMX20_03046 at 3186.987 kb on - strand, within MPMX20_03046 at 3186.987 kb on - strand, within MPMX20_03046 at 3186.989 kb on + strand, within MPMX20_03046 at 3187.044 kb on - strand, within MPMX20_03046 at 3187.044 kb on - strand, within MPMX20_03046 at 3187.044 kb on - strand, within MPMX20_03046 at 3187.049 kb on + strand, within MPMX20_03046 at 3187.049 kb on + strand, within MPMX20_03046 at 3187.049 kb on + strand, within MPMX20_03046 at 3187.201 kb on - strand at 3187.215 kb on - strand at 3187.336 kb on - strand at 3187.393 kb on + strand, within MPMX20_03047 at 3187.401 kb on + strand, within MPMX20_03047 at 3187.409 kb on - strand, within MPMX20_03047 at 3187.409 kb on - strand, within MPMX20_03047 at 3187.413 kb on - strand, within MPMX20_03047 at 3187.460 kb on - strand, within MPMX20_03047 at 3187.485 kb on + strand, within MPMX20_03047 at 3187.493 kb on - strand, within MPMX20_03047 at 3187.495 kb on + strand, within MPMX20_03047 at 3187.495 kb on + strand, within MPMX20_03047 at 3187.503 kb on - strand, within MPMX20_03047 at 3187.573 kb on + strand, within MPMX20_03047 at 3187.638 kb on + strand, within MPMX20_03047 at 3187.782 kb on + strand, within MPMX20_03047 at 3187.790 kb on - strand, within MPMX20_03047 at 3187.796 kb on + strand, within MPMX20_03047 at 3187.796 kb on + strand, within MPMX20_03047 at 3187.814 kb on + strand, within MPMX20_03047 at 3187.815 kb on - strand, within MPMX20_03047 at 3187.815 kb on - strand, within MPMX20_03047 at 3187.834 kb on - strand at 3187.834 kb on - strand at 3187.855 kb on + strand at 3187.863 kb on - strand at 3187.912 kb on + strand at 3187.913 kb on - strand at 3187.913 kb on - strand at 3187.918 kb on + strand at 3187.942 kb on + strand at 3187.947 kb on + strand at 3187.948 kb on + strand at 3187.955 kb on + strand at 3187.956 kb on - strand at 3188.027 kb on + strand at 3188.059 kb on - strand, within MPMX20_03048 at 3188.066 kb on - strand, within MPMX20_03048 at 3188.114 kb on - strand, within MPMX20_03048 at 3188.160 kb on - strand, within MPMX20_03048 at 3188.189 kb on + strand, within MPMX20_03048 at 3188.227 kb on - strand, within MPMX20_03048 at 3188.236 kb on + strand, within MPMX20_03048 at 3188.236 kb on + strand, within MPMX20_03048 at 3188.236 kb on + strand, within MPMX20_03048 at 3188.236 kb on + strand, within MPMX20_03048 at 3188.244 kb on - strand, within MPMX20_03048 at 3188.244 kb on - strand, within MPMX20_03048
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,184,433 + MPMX20_03045 0.40 -0.5 3,184,441 - MPMX20_03045 0.40 +0.3 3,184,523 + MPMX20_03045 0.46 +0.5 3,184,540 + MPMX20_03045 0.47 +1.1 3,184,564 - MPMX20_03045 0.48 -0.0 3,184,703 + MPMX20_03045 0.57 -0.3 3,184,716 + MPMX20_03045 0.58 +0.1 3,184,755 + MPMX20_03045 0.60 +0.6 3,184,776 - MPMX20_03045 0.62 -0.3 3,184,808 - MPMX20_03045 0.64 +1.7 3,184,819 - MPMX20_03045 0.64 -0.1 3,184,853 - MPMX20_03045 0.66 +0.5 3,184,856 - MPMX20_03045 0.67 -1.3 3,184,858 - MPMX20_03045 0.67 -0.6 3,184,967 - MPMX20_03045 0.74 +0.1 3,184,969 - MPMX20_03045 0.74 -3.4 3,185,148 + MPMX20_03045 0.85 +1.5 3,185,148 + MPMX20_03045 0.85 -0.5 3,185,156 - MPMX20_03045 0.86 +0.3 3,185,161 + MPMX20_03045 0.86 +0.7 3,185,258 - -1.4 3,185,301 - +0.4 3,185,327 - +3.1 3,185,339 - +1.5 3,185,363 + -0.7 3,185,385 - -1.4 3,185,428 + -0.2 3,185,428 + +0.8 3,185,477 - -0.1 3,185,541 + -1.3 3,185,558 + -0.6 3,185,591 - -1.0 3,185,608 - +1.0 3,185,642 - MPMX20_03046 0.11 -0.5 3,185,642 - MPMX20_03046 0.11 -1.0 3,185,729 + MPMX20_03046 0.16 -1.9 3,185,732 + MPMX20_03046 0.16 -1.4 3,185,740 - MPMX20_03046 0.17 +1.0 3,185,758 + MPMX20_03046 0.18 -0.8 3,185,766 - MPMX20_03046 0.18 -0.7 3,185,792 + MPMX20_03046 0.20 -1.6 3,185,794 - MPMX20_03046 0.20 -2.5 3,185,869 - MPMX20_03046 0.24 -0.0 3,185,893 - MPMX20_03046 0.25 -0.3 3,185,915 + MPMX20_03046 0.26 -0.2 3,185,974 + MPMX20_03046 0.29 -1.8 3,186,031 + MPMX20_03046 0.32 -2.4 3,186,032 - MPMX20_03046 0.33 +1.0 3,186,039 - MPMX20_03046 0.33 -1.1 3,186,049 + MPMX20_03046 0.33 -1.4 3,186,104 + MPMX20_03046 0.36 -2.7 3,186,104 + MPMX20_03046 0.36 -2.0 3,186,112 - MPMX20_03046 0.37 -0.0 3,186,112 - MPMX20_03046 0.37 -3.4 3,186,155 + MPMX20_03046 0.39 -3.4 3,186,163 - MPMX20_03046 0.40 +0.2 3,186,212 + MPMX20_03046 0.42 -3.3 3,186,260 - MPMX20_03046 0.45 -1.8 3,186,275 + MPMX20_03046 0.46 -1.5 3,186,277 + MPMX20_03046 0.46 -0.0 3,186,277 + MPMX20_03046 0.46 -3.8 3,186,283 - MPMX20_03046 0.46 -1.2 3,186,286 - MPMX20_03046 0.46 -3.2 3,186,287 - MPMX20_03046 0.46 -0.0 3,186,336 + MPMX20_03046 0.49 -1.2 3,186,345 + MPMX20_03046 0.49 -3.7 3,186,353 - MPMX20_03046 0.50 +0.2 3,186,355 + MPMX20_03046 0.50 -2.6 3,186,355 + MPMX20_03046 0.50 -1.2 3,186,355 + MPMX20_03046 0.50 +1.5 3,186,363 - MPMX20_03046 0.50 -0.6 3,186,457 - MPMX20_03046 0.55 -3.9 3,186,473 - MPMX20_03046 0.56 -2.2 3,186,473 - MPMX20_03046 0.56 -0.8 3,186,491 - MPMX20_03046 0.57 -2.6 3,186,500 + MPMX20_03046 0.58 -2.7 3,186,513 - MPMX20_03046 0.59 -3.9 3,186,513 - MPMX20_03046 0.59 -1.8 3,186,556 - MPMX20_03046 0.61 -2.9 3,186,576 - MPMX20_03046 0.62 -2.8 3,186,607 - MPMX20_03046 0.64 +0.6 3,186,638 + MPMX20_03046 0.65 -1.4 3,186,655 - MPMX20_03046 0.66 -2.4 3,186,702 + MPMX20_03046 0.69 -2.0 3,186,703 - MPMX20_03046 0.69 -1.6 3,186,728 - MPMX20_03046 0.70 -2.9 3,186,835 - MPMX20_03046 0.76 -4.7 3,186,925 + MPMX20_03046 0.81 -3.0 3,186,933 - MPMX20_03046 0.81 -3.9 3,186,977 - MPMX20_03046 0.84 -3.8 3,186,979 + MPMX20_03046 0.84 -1.4 3,186,987 - MPMX20_03046 0.84 -2.9 3,186,987 - MPMX20_03046 0.84 -4.2 3,186,989 + MPMX20_03046 0.84 -3.7 3,187,044 - MPMX20_03046 0.87 -2.2 3,187,044 - MPMX20_03046 0.87 -1.4 3,187,044 - MPMX20_03046 0.87 -0.6 3,187,049 + MPMX20_03046 0.87 -3.0 3,187,049 + MPMX20_03046 0.87 -3.0 3,187,049 + MPMX20_03046 0.87 -0.0 3,187,201 - -2.0 3,187,215 - -4.3 3,187,336 - -0.9 3,187,393 + MPMX20_03047 0.15 -1.4 3,187,401 + MPMX20_03047 0.17 -1.6 3,187,409 - MPMX20_03047 0.18 +0.5 3,187,409 - MPMX20_03047 0.18 -2.4 3,187,413 - MPMX20_03047 0.19 -0.8 3,187,460 - MPMX20_03047 0.27 -0.6 3,187,485 + MPMX20_03047 0.31 +0.3 3,187,493 - MPMX20_03047 0.33 -1.0 3,187,495 + MPMX20_03047 0.33 -1.4 3,187,495 + MPMX20_03047 0.33 -1.6 3,187,503 - MPMX20_03047 0.34 -2.2 3,187,573 + MPMX20_03047 0.46 -3.0 3,187,638 + MPMX20_03047 0.58 -1.5 3,187,782 + MPMX20_03047 0.82 -2.5 3,187,790 - MPMX20_03047 0.84 -1.4 3,187,796 + MPMX20_03047 0.85 -0.8 3,187,796 + MPMX20_03047 0.85 -1.8 3,187,814 + MPMX20_03047 0.88 +2.0 3,187,815 - MPMX20_03047 0.88 -1.4 3,187,815 - MPMX20_03047 0.88 -1.4 3,187,834 - -0.5 3,187,834 - -1.6 3,187,855 + -0.0 3,187,863 - -1.0 3,187,912 + -0.6 3,187,913 - -0.3 3,187,913 - +0.2 3,187,918 + -2.0 3,187,942 + -1.0 3,187,947 + -2.0 3,187,948 + -2.8 3,187,955 + -1.0 3,187,956 - -0.1 3,188,027 + +0.3 3,188,059 - MPMX20_03048 0.13 +2.5 3,188,066 - MPMX20_03048 0.14 +1.0 3,188,114 - MPMX20_03048 0.21 -0.6 3,188,160 - MPMX20_03048 0.29 +0.1 3,188,189 + MPMX20_03048 0.33 -1.0 3,188,227 - MPMX20_03048 0.39 -1.2 3,188,236 + MPMX20_03048 0.40 -0.8 3,188,236 + MPMX20_03048 0.40 -0.7 3,188,236 + MPMX20_03048 0.40 +0.3 3,188,236 + MPMX20_03048 0.40 -1.1 3,188,244 - MPMX20_03048 0.42 +1.0 3,188,244 - MPMX20_03048 0.42 +6.2
Or see this region's nucleotide sequence