Experiment: 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02986 and MPMX20_02987 are separated by 73 nucleotides MPMX20_02987 and MPMX20_02988 are separated by 18 nucleotides
MPMX20_02986: MPMX20_02986 - Fosfomycin resistance protein AbaF, at 3,118,499 to 3,119,815
_02986
MPMX20_02987: MPMX20_02987 - AMP nucleosidase, at 3,119,889 to 3,121,343
_02987
MPMX20_02988: MPMX20_02988 - hypothetical protein, at 3,121,362 to 3,123,134
_02988
Position (kb)
3119
3120
3121
3122 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8 at 3118.906 kb on - strand, within MPMX20_02986 at 3118.906 kb on - strand, within MPMX20_02986 at 3118.935 kb on - strand, within MPMX20_02986 at 3119.010 kb on + strand, within MPMX20_02986 at 3119.132 kb on + strand, within MPMX20_02986 at 3119.170 kb on + strand, within MPMX20_02986 at 3119.307 kb on - strand, within MPMX20_02986 at 3119.401 kb on + strand, within MPMX20_02986 at 3119.407 kb on + strand, within MPMX20_02986 at 3119.415 kb on - strand, within MPMX20_02986 at 3119.433 kb on + strand, within MPMX20_02986 at 3119.433 kb on + strand, within MPMX20_02986 at 3119.433 kb on + strand, within MPMX20_02986 at 3119.441 kb on - strand, within MPMX20_02986 at 3119.554 kb on + strand, within MPMX20_02986 at 3119.573 kb on + strand, within MPMX20_02986 at 3119.619 kb on - strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.650 kb on - strand, within MPMX20_02986 at 3119.669 kb on - strand, within MPMX20_02986 at 3119.736 kb on + strand at 3119.744 kb on - strand at 3119.901 kb on + strand at 3119.912 kb on + strand at 3119.912 kb on + strand at 3119.946 kb on + strand at 3119.955 kb on - strand at 3120.023 kb on + strand at 3120.031 kb on - strand at 3120.154 kb on + strand, within MPMX20_02987 at 3120.159 kb on + strand, within MPMX20_02987 at 3120.162 kb on - strand, within MPMX20_02987 at 3120.162 kb on - strand, within MPMX20_02987 at 3120.183 kb on + strand, within MPMX20_02987 at 3120.206 kb on + strand, within MPMX20_02987 at 3120.206 kb on + strand, within MPMX20_02987 at 3120.206 kb on + strand, within MPMX20_02987 at 3120.214 kb on - strand, within MPMX20_02987 at 3120.214 kb on - strand, within MPMX20_02987 at 3120.214 kb on - strand, within MPMX20_02987 at 3120.274 kb on + strand, within MPMX20_02987 at 3120.286 kb on + strand, within MPMX20_02987 at 3120.286 kb on + strand, within MPMX20_02987 at 3120.484 kb on + strand, within MPMX20_02987 at 3120.495 kb on - strand, within MPMX20_02987 at 3120.551 kb on - strand, within MPMX20_02987 at 3120.566 kb on + strand, within MPMX20_02987 at 3120.581 kb on + strand, within MPMX20_02987 at 3120.581 kb on + strand, within MPMX20_02987 at 3120.632 kb on + strand, within MPMX20_02987 at 3120.645 kb on - strand, within MPMX20_02987 at 3120.813 kb on - strand, within MPMX20_02987 at 3120.856 kb on - strand, within MPMX20_02987 at 3120.935 kb on - strand, within MPMX20_02987 at 3120.947 kb on - strand, within MPMX20_02987 at 3120.949 kb on - strand, within MPMX20_02987 at 3120.959 kb on + strand, within MPMX20_02987 at 3120.964 kb on + strand, within MPMX20_02987 at 3120.972 kb on - strand, within MPMX20_02987 at 3121.038 kb on + strand, within MPMX20_02987 at 3121.043 kb on + strand, within MPMX20_02987 at 3121.073 kb on - strand, within MPMX20_02987 at 3121.076 kb on + strand, within MPMX20_02987 at 3121.124 kb on + strand, within MPMX20_02987 at 3121.143 kb on + strand, within MPMX20_02987 at 3121.152 kb on + strand, within MPMX20_02987 at 3121.163 kb on - strand, within MPMX20_02987 at 3121.184 kb on - strand, within MPMX20_02987 at 3121.292 kb on - strand at 3121.326 kb on - strand at 3121.455 kb on + strand at 3121.455 kb on + strand at 3121.455 kb on + strand at 3121.463 kb on - strand at 3121.508 kb on - strand at 3121.518 kb on + strand at 3121.518 kb on + strand at 3121.592 kb on + strand, within MPMX20_02988 at 3121.592 kb on + strand, within MPMX20_02988 at 3121.649 kb on + strand, within MPMX20_02988 at 3121.661 kb on + strand, within MPMX20_02988 at 3121.661 kb on + strand, within MPMX20_02988 at 3121.661 kb on + strand, within MPMX20_02988 at 3121.669 kb on - strand, within MPMX20_02988 at 3121.669 kb on - strand, within MPMX20_02988 at 3121.693 kb on - strand, within MPMX20_02988 at 3121.693 kb on - strand, within MPMX20_02988 at 3121.727 kb on + strand, within MPMX20_02988 at 3121.729 kb on + strand, within MPMX20_02988 at 3121.737 kb on - strand, within MPMX20_02988 at 3121.910 kb on + strand, within MPMX20_02988 at 3121.910 kb on + strand, within MPMX20_02988 at 3121.918 kb on - strand, within MPMX20_02988 at 3121.990 kb on + strand, within MPMX20_02988 at 3121.990 kb on + strand, within MPMX20_02988 at 3121.998 kb on - strand, within MPMX20_02988 at 3121.998 kb on - strand, within MPMX20_02988 at 3122.057 kb on + strand, within MPMX20_02988 at 3122.109 kb on - strand, within MPMX20_02988 at 3122.180 kb on - strand, within MPMX20_02988 at 3122.228 kb on - strand, within MPMX20_02988 at 3122.329 kb on + strand, within MPMX20_02988
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,118,906 - MPMX20_02986 0.31 -0.5 3,118,906 - MPMX20_02986 0.31 +0.0 3,118,935 - MPMX20_02986 0.33 -0.6 3,119,010 + MPMX20_02986 0.39 +0.4 3,119,132 + MPMX20_02986 0.48 -0.1 3,119,170 + MPMX20_02986 0.51 +0.9 3,119,307 - MPMX20_02986 0.61 +0.4 3,119,401 + MPMX20_02986 0.68 +0.7 3,119,407 + MPMX20_02986 0.69 +0.5 3,119,415 - MPMX20_02986 0.70 +0.7 3,119,433 + MPMX20_02986 0.71 -0.3 3,119,433 + MPMX20_02986 0.71 +0.0 3,119,433 + MPMX20_02986 0.71 +2.0 3,119,441 - MPMX20_02986 0.72 +0.3 3,119,554 + MPMX20_02986 0.80 +0.4 3,119,573 + MPMX20_02986 0.82 -1.0 3,119,619 - MPMX20_02986 0.85 +8.7 3,119,642 + MPMX20_02986 0.87 +1.1 3,119,642 + MPMX20_02986 0.87 -0.7 3,119,642 + MPMX20_02986 0.87 -0.3 3,119,642 + MPMX20_02986 0.87 -0.1 3,119,642 + MPMX20_02986 0.87 +0.2 3,119,650 - MPMX20_02986 0.87 +2.1 3,119,669 - MPMX20_02986 0.89 +0.4 3,119,736 + -0.1 3,119,744 - -0.7 3,119,901 + +2.6 3,119,912 + -0.7 3,119,912 + -2.3 3,119,946 + +1.0 3,119,955 - -0.4 3,120,023 + -0.3 3,120,031 - -0.8 3,120,154 + MPMX20_02987 0.18 +1.0 3,120,159 + MPMX20_02987 0.19 +0.0 3,120,162 - MPMX20_02987 0.19 -0.0 3,120,162 - MPMX20_02987 0.19 -0.3 3,120,183 + MPMX20_02987 0.20 -0.2 3,120,206 + MPMX20_02987 0.22 -0.6 3,120,206 + MPMX20_02987 0.22 -0.6 3,120,206 + MPMX20_02987 0.22 -0.1 3,120,214 - MPMX20_02987 0.22 -1.2 3,120,214 - MPMX20_02987 0.22 +0.3 3,120,214 - MPMX20_02987 0.22 +1.0 3,120,274 + MPMX20_02987 0.26 +0.7 3,120,286 + MPMX20_02987 0.27 +0.4 3,120,286 + MPMX20_02987 0.27 +2.0 3,120,484 + MPMX20_02987 0.41 +0.2 3,120,495 - MPMX20_02987 0.42 -1.3 3,120,551 - MPMX20_02987 0.45 +1.8 3,120,566 + MPMX20_02987 0.47 +0.2 3,120,581 + MPMX20_02987 0.48 -0.5 3,120,581 + MPMX20_02987 0.48 +1.7 3,120,632 + MPMX20_02987 0.51 -0.5 3,120,645 - MPMX20_02987 0.52 +1.1 3,120,813 - MPMX20_02987 0.64 +0.2 3,120,856 - MPMX20_02987 0.66 -1.3 3,120,935 - MPMX20_02987 0.72 -0.6 3,120,947 - MPMX20_02987 0.73 +0.4 3,120,949 - MPMX20_02987 0.73 -0.2 3,120,959 + MPMX20_02987 0.74 +0.8 3,120,964 + MPMX20_02987 0.74 -1.6 3,120,972 - MPMX20_02987 0.74 -0.2 3,121,038 + MPMX20_02987 0.79 +1.4 3,121,043 + MPMX20_02987 0.79 +0.7 3,121,073 - MPMX20_02987 0.81 -1.0 3,121,076 + MPMX20_02987 0.82 -0.4 3,121,124 + MPMX20_02987 0.85 -0.5 3,121,143 + MPMX20_02987 0.86 +0.4 3,121,152 + MPMX20_02987 0.87 +2.3 3,121,163 - MPMX20_02987 0.88 +0.6 3,121,184 - MPMX20_02987 0.89 -0.4 3,121,292 - +1.5 3,121,326 - +2.0 3,121,455 + +0.3 3,121,455 + -1.2 3,121,455 + +0.2 3,121,463 - +0.3 3,121,508 - +0.9 3,121,518 + -2.0 3,121,518 + +1.0 3,121,592 + MPMX20_02988 0.13 -0.4 3,121,592 + MPMX20_02988 0.13 +0.6 3,121,649 + MPMX20_02988 0.16 -0.3 3,121,661 + MPMX20_02988 0.17 +1.3 3,121,661 + MPMX20_02988 0.17 -0.5 3,121,661 + MPMX20_02988 0.17 +1.4 3,121,669 - MPMX20_02988 0.17 +0.7 3,121,669 - MPMX20_02988 0.17 +2.6 3,121,693 - MPMX20_02988 0.19 -1.6 3,121,693 - MPMX20_02988 0.19 +0.6 3,121,727 + MPMX20_02988 0.21 +0.1 3,121,729 + MPMX20_02988 0.21 -0.1 3,121,737 - MPMX20_02988 0.21 -0.9 3,121,910 + MPMX20_02988 0.31 -0.6 3,121,910 + MPMX20_02988 0.31 +0.0 3,121,918 - MPMX20_02988 0.31 +1.1 3,121,990 + MPMX20_02988 0.35 +0.1 3,121,990 + MPMX20_02988 0.35 -1.6 3,121,998 - MPMX20_02988 0.36 -0.8 3,121,998 - MPMX20_02988 0.36 +3.6 3,122,057 + MPMX20_02988 0.39 +0.6 3,122,109 - MPMX20_02988 0.42 -0.6 3,122,180 - MPMX20_02988 0.46 -0.2 3,122,228 - MPMX20_02988 0.49 +0.7 3,122,329 + MPMX20_02988 0.55 +0.0
Or see this region's nucleotide sequence