Experiment: 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01938 and MPMX20_01939 are separated by 29 nucleotides MPMX20_01939 and MPMX20_01940 are separated by 4 nucleotides MPMX20_01940 and MPMX20_01941 are separated by 341 nucleotides MPMX20_01941 and MPMX20_01942 are separated by 188 nucleotides
MPMX20_01938: MPMX20_01938 - putative two-component-system connector protein AriR, at 2,035,584 to 2,035,862
_01938
MPMX20_01939: MPMX20_01939 - hypothetical protein, at 2,035,892 to 2,036,212
_01939
MPMX20_01940: MPMX20_01940 - putative two-component-system connector protein YcgZ, at 2,036,217 to 2,036,456
_01940
MPMX20_01941: MPMX20_01941 - Blue light- and temperature-regulated antirepressor BluF, at 2,036,798 to 2,038,018
_01941
MPMX20_01942: MPMX20_01942 - HTH-type transcriptional repressor BluR, at 2,038,207 to 2,038,935
_01942
Position (kb)
2036
2037
2038
2039 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2035.837 kb on + strand at 2035.837 kb on + strand at 2035.838 kb on - strand at 2035.860 kb on + strand at 2035.865 kb on + strand at 2035.868 kb on - strand at 2035.939 kb on + strand, within MPMX20_01939 at 2035.947 kb on - strand, within MPMX20_01939 at 2035.947 kb on - strand, within MPMX20_01939 at 2035.952 kb on - strand, within MPMX20_01939 at 2035.953 kb on + strand, within MPMX20_01939 at 2035.968 kb on - strand, within MPMX20_01939 at 2035.983 kb on - strand, within MPMX20_01939 at 2035.988 kb on + strand, within MPMX20_01939 at 2035.988 kb on + strand, within MPMX20_01939 at 2035.991 kb on - strand, within MPMX20_01939 at 2035.998 kb on + strand, within MPMX20_01939 at 2035.998 kb on + strand, within MPMX20_01939 at 2036.016 kb on - strand, within MPMX20_01939 at 2036.017 kb on - strand, within MPMX20_01939 at 2036.126 kb on - strand, within MPMX20_01939 at 2036.143 kb on + strand, within MPMX20_01939 at 2036.169 kb on + strand, within MPMX20_01939 at 2036.192 kb on + strand at 2036.215 kb on - strand at 2036.222 kb on - strand at 2036.248 kb on + strand, within MPMX20_01940 at 2036.256 kb on - strand, within MPMX20_01940 at 2036.256 kb on - strand, within MPMX20_01940 at 2036.272 kb on - strand, within MPMX20_01940 at 2036.300 kb on + strand, within MPMX20_01940 at 2036.300 kb on - strand, within MPMX20_01940 at 2036.308 kb on - strand, within MPMX20_01940 at 2036.308 kb on - strand, within MPMX20_01940 at 2036.308 kb on - strand, within MPMX20_01940 at 2036.361 kb on - strand, within MPMX20_01940 at 2036.361 kb on - strand, within MPMX20_01940 at 2036.376 kb on - strand, within MPMX20_01940 at 2036.407 kb on - strand, within MPMX20_01940 at 2036.437 kb on + strand at 2036.437 kb on + strand at 2036.774 kb on + strand at 2036.781 kb on - strand at 2036.781 kb on - strand at 2036.920 kb on + strand, within MPMX20_01941 at 2036.947 kb on + strand, within MPMX20_01941 at 2036.968 kb on + strand, within MPMX20_01941 at 2037.017 kb on - strand, within MPMX20_01941 at 2037.017 kb on - strand, within MPMX20_01941 at 2037.018 kb on - strand, within MPMX20_01941 at 2037.102 kb on + strand, within MPMX20_01941 at 2037.227 kb on - strand, within MPMX20_01941 at 2037.229 kb on + strand, within MPMX20_01941 at 2037.293 kb on - strand, within MPMX20_01941 at 2037.371 kb on + strand, within MPMX20_01941 at 2037.379 kb on - strand, within MPMX20_01941 at 2037.379 kb on - strand, within MPMX20_01941 at 2037.398 kb on - strand, within MPMX20_01941 at 2037.436 kb on + strand, within MPMX20_01941 at 2037.445 kb on - strand, within MPMX20_01941 at 2037.467 kb on + strand, within MPMX20_01941 at 2037.529 kb on + strand, within MPMX20_01941 at 2037.558 kb on - strand, within MPMX20_01941 at 2037.664 kb on - strand, within MPMX20_01941 at 2037.742 kb on - strand, within MPMX20_01941 at 2037.871 kb on + strand, within MPMX20_01941 at 2037.871 kb on + strand, within MPMX20_01941 at 2037.921 kb on + strand at 2037.921 kb on - strand at 2038.071 kb on + strand at 2038.073 kb on + strand at 2038.097 kb on + strand at 2038.102 kb on - strand at 2038.105 kb on + strand at 2038.105 kb on + strand at 2038.105 kb on + strand at 2038.105 kb on + strand at 2038.105 kb on + strand at 2038.105 kb on + strand at 2038.105 kb on + strand at 2038.105 kb on + strand at 2038.105 kb on + strand at 2038.105 kb on + strand at 2038.105 kb on - strand at 2038.107 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.113 kb on - strand at 2038.162 kb on + strand at 2038.201 kb on + strand at 2038.210 kb on + strand at 2038.229 kb on + strand at 2038.264 kb on - strand at 2038.264 kb on - strand at 2038.281 kb on + strand, within MPMX20_01942 at 2038.362 kb on + strand, within MPMX20_01942 at 2038.401 kb on + strand, within MPMX20_01942 at 2038.402 kb on + strand, within MPMX20_01942 at 2038.440 kb on + strand, within MPMX20_01942 at 2038.440 kb on + strand, within MPMX20_01942 at 2038.440 kb on + strand, within MPMX20_01942 at 2038.440 kb on + strand, within MPMX20_01942 at 2038.448 kb on - strand, within MPMX20_01942 at 2038.448 kb on - strand, within MPMX20_01942 at 2038.448 kb on - strand, within MPMX20_01942 at 2038.495 kb on - strand, within MPMX20_01942 at 2038.496 kb on + strand, within MPMX20_01942 at 2038.504 kb on - strand, within MPMX20_01942 at 2038.629 kb on + strand, within MPMX20_01942 at 2038.637 kb on - strand, within MPMX20_01942 at 2038.637 kb on - strand, within MPMX20_01942 at 2038.665 kb on - strand, within MPMX20_01942 at 2038.665 kb on - strand, within MPMX20_01942 at 2038.704 kb on + strand, within MPMX20_01942 at 2038.719 kb on - strand, within MPMX20_01942 at 2038.745 kb on - strand, within MPMX20_01942 at 2038.876 kb on - strand at 2038.906 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,035,837 + -0.3 2,035,837 + -0.9 2,035,838 - +0.4 2,035,860 + -0.8 2,035,865 + +0.2 2,035,868 - -1.2 2,035,939 + MPMX20_01939 0.15 -1.0 2,035,947 - MPMX20_01939 0.17 -1.9 2,035,947 - MPMX20_01939 0.17 +0.6 2,035,952 - MPMX20_01939 0.19 -0.6 2,035,953 + MPMX20_01939 0.19 +0.0 2,035,968 - MPMX20_01939 0.24 -0.1 2,035,983 - MPMX20_01939 0.28 -2.0 2,035,988 + MPMX20_01939 0.30 -0.1 2,035,988 + MPMX20_01939 0.30 -1.2 2,035,991 - MPMX20_01939 0.31 -2.4 2,035,998 + MPMX20_01939 0.33 -1.7 2,035,998 + MPMX20_01939 0.33 -2.1 2,036,016 - MPMX20_01939 0.39 -1.5 2,036,017 - MPMX20_01939 0.39 -0.4 2,036,126 - MPMX20_01939 0.73 -1.6 2,036,143 + MPMX20_01939 0.78 -0.9 2,036,169 + MPMX20_01939 0.86 -0.7 2,036,192 + -2.7 2,036,215 - +2.5 2,036,222 - -1.1 2,036,248 + MPMX20_01940 0.13 +1.0 2,036,256 - MPMX20_01940 0.16 -1.4 2,036,256 - MPMX20_01940 0.16 -0.7 2,036,272 - MPMX20_01940 0.23 -1.0 2,036,300 + MPMX20_01940 0.35 +0.1 2,036,300 - MPMX20_01940 0.35 +0.1 2,036,308 - MPMX20_01940 0.38 -0.2 2,036,308 - MPMX20_01940 0.38 -0.4 2,036,308 - MPMX20_01940 0.38 -1.6 2,036,361 - MPMX20_01940 0.60 -0.5 2,036,361 - MPMX20_01940 0.60 -0.8 2,036,376 - MPMX20_01940 0.66 -0.7 2,036,407 - MPMX20_01940 0.79 -0.7 2,036,437 + +1.0 2,036,437 + +1.3 2,036,774 + +1.6 2,036,781 - +0.9 2,036,781 - +1.3 2,036,920 + MPMX20_01941 0.10 -0.1 2,036,947 + MPMX20_01941 0.12 +1.0 2,036,968 + MPMX20_01941 0.14 +1.4 2,037,017 - MPMX20_01941 0.18 +1.5 2,037,017 - MPMX20_01941 0.18 +0.9 2,037,018 - MPMX20_01941 0.18 +1.3 2,037,102 + MPMX20_01941 0.25 -0.0 2,037,227 - MPMX20_01941 0.35 -0.3 2,037,229 + MPMX20_01941 0.35 +1.4 2,037,293 - MPMX20_01941 0.41 +1.5 2,037,371 + MPMX20_01941 0.47 +0.8 2,037,379 - MPMX20_01941 0.48 -0.1 2,037,379 - MPMX20_01941 0.48 +0.7 2,037,398 - MPMX20_01941 0.49 +0.8 2,037,436 + MPMX20_01941 0.52 -0.5 2,037,445 - MPMX20_01941 0.53 +1.9 2,037,467 + MPMX20_01941 0.55 -0.1 2,037,529 + MPMX20_01941 0.60 +0.5 2,037,558 - MPMX20_01941 0.62 +2.5 2,037,664 - MPMX20_01941 0.71 +1.2 2,037,742 - MPMX20_01941 0.77 +0.2 2,037,871 + MPMX20_01941 0.88 +3.0 2,037,871 + MPMX20_01941 0.88 -0.9 2,037,921 + +0.1 2,037,921 - +0.5 2,038,071 + -2.4 2,038,073 + +0.2 2,038,097 + -0.3 2,038,102 - -1.6 2,038,105 + -1.2 2,038,105 + -1.6 2,038,105 + -1.1 2,038,105 + -0.4 2,038,105 + -1.0 2,038,105 + -0.7 2,038,105 + +0.0 2,038,105 + +0.1 2,038,105 + -1.1 2,038,105 + -0.7 2,038,105 - +0.9 2,038,107 - -0.1 2,038,113 - -0.7 2,038,113 - +5.6 2,038,113 - -1.1 2,038,113 - -0.0 2,038,113 - +0.9 2,038,113 - -1.7 2,038,113 - -2.0 2,038,113 - -0.8 2,038,113 - +0.1 2,038,113 - -0.9 2,038,113 - +1.9 2,038,162 + -1.1 2,038,201 + -2.8 2,038,210 + +0.3 2,038,229 + -1.2 2,038,264 - -0.1 2,038,264 - -0.3 2,038,281 + MPMX20_01942 0.10 -1.4 2,038,362 + MPMX20_01942 0.21 -0.7 2,038,401 + MPMX20_01942 0.27 -2.8 2,038,402 + MPMX20_01942 0.27 -2.7 2,038,440 + MPMX20_01942 0.32 -1.2 2,038,440 + MPMX20_01942 0.32 -2.2 2,038,440 + MPMX20_01942 0.32 -1.3 2,038,440 + MPMX20_01942 0.32 -2.4 2,038,448 - MPMX20_01942 0.33 +0.1 2,038,448 - MPMX20_01942 0.33 -1.4 2,038,448 - MPMX20_01942 0.33 -2.8 2,038,495 - MPMX20_01942 0.40 -1.1 2,038,496 + MPMX20_01942 0.40 -1.7 2,038,504 - MPMX20_01942 0.41 -0.1 2,038,629 + MPMX20_01942 0.58 -1.7 2,038,637 - MPMX20_01942 0.59 +0.9 2,038,637 - MPMX20_01942 0.59 -2.2 2,038,665 - MPMX20_01942 0.63 +0.2 2,038,665 - MPMX20_01942 0.63 -0.7 2,038,704 + MPMX20_01942 0.68 -0.9 2,038,719 - MPMX20_01942 0.70 -1.2 2,038,745 - MPMX20_01942 0.74 -2.2 2,038,876 - +1.5 2,038,906 - -1.2
Or see this region's nucleotide sequence