Experiment: TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04574 and MPMX20_04575 are separated by 383 nucleotides MPMX20_04575 and MPMX20_04576 are separated by 48 nucleotides
MPMX20_04574: MPMX20_04574 - Sulfur carrier protein FdhD, at 4,785,302 to 4,786,138
_04574
MPMX20_04575: MPMX20_04575 - Formate dehydrogenase-O major subunit, at 4,786,522 to 4,787,109
_04575
MPMX20_04576: MPMX20_04576 - Formate dehydrogenase-O major subunit, at 4,787,158 to 4,789,572
_04576
Position (kb)
4786
4787
4788 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 4785.557 kb on - strand, within MPMX20_04574 at 4785.557 kb on - strand, within MPMX20_04574 at 4785.665 kb on - strand, within MPMX20_04574 at 4785.666 kb on + strand, within MPMX20_04574 at 4785.684 kb on - strand, within MPMX20_04574 at 4785.711 kb on - strand, within MPMX20_04574 at 4785.730 kb on - strand, within MPMX20_04574 at 4785.760 kb on + strand, within MPMX20_04574 at 4785.768 kb on - strand, within MPMX20_04574 at 4785.856 kb on + strand, within MPMX20_04574 at 4785.864 kb on - strand, within MPMX20_04574 at 4785.864 kb on - strand, within MPMX20_04574 at 4785.952 kb on + strand, within MPMX20_04574 at 4786.004 kb on + strand, within MPMX20_04574 at 4786.007 kb on - strand, within MPMX20_04574 at 4786.063 kb on - strand at 4786.136 kb on - strand at 4786.157 kb on + strand at 4786.157 kb on + strand at 4786.157 kb on + strand at 4786.391 kb on - strand at 4786.452 kb on - strand at 4786.463 kb on + strand at 4786.493 kb on - strand at 4786.525 kb on - strand at 4786.527 kb on + strand at 4786.527 kb on + strand at 4786.527 kb on + strand at 4786.532 kb on + strand at 4786.535 kb on - strand at 4786.540 kb on - strand at 4786.607 kb on + strand, within MPMX20_04575 at 4786.617 kb on + strand, within MPMX20_04575 at 4786.647 kb on - strand, within MPMX20_04575 at 4786.657 kb on - strand, within MPMX20_04575 at 4786.675 kb on - strand, within MPMX20_04575 at 4786.682 kb on - strand, within MPMX20_04575 at 4786.704 kb on - strand, within MPMX20_04575 at 4786.752 kb on + strand, within MPMX20_04575 at 4786.762 kb on + strand, within MPMX20_04575 at 4786.805 kb on + strand, within MPMX20_04575 at 4786.805 kb on - strand, within MPMX20_04575 at 4786.828 kb on - strand, within MPMX20_04575 at 4786.837 kb on - strand, within MPMX20_04575 at 4786.919 kb on + strand, within MPMX20_04575 at 4786.929 kb on + strand, within MPMX20_04575 at 4786.937 kb on - strand, within MPMX20_04575 at 4786.967 kb on + strand, within MPMX20_04575 at 4787.000 kb on + strand, within MPMX20_04575 at 4787.005 kb on + strand, within MPMX20_04575 at 4787.021 kb on - strand, within MPMX20_04575 at 4787.094 kb on - strand at 4787.193 kb on + strand at 4787.193 kb on + strand at 4787.234 kb on - strand at 4787.417 kb on - strand, within MPMX20_04576 at 4787.424 kb on + strand, within MPMX20_04576 at 4787.430 kb on + strand, within MPMX20_04576 at 4787.431 kb on + strand, within MPMX20_04576 at 4787.431 kb on + strand, within MPMX20_04576 at 4787.438 kb on - strand, within MPMX20_04576 at 4787.439 kb on - strand, within MPMX20_04576 at 4787.439 kb on - strand, within MPMX20_04576 at 4787.441 kb on + strand, within MPMX20_04576 at 4787.449 kb on - strand, within MPMX20_04576 at 4787.455 kb on - strand, within MPMX20_04576 at 4787.455 kb on - strand, within MPMX20_04576 at 4787.472 kb on - strand, within MPMX20_04576 at 4787.472 kb on - strand, within MPMX20_04576 at 4787.479 kb on - strand, within MPMX20_04576 at 4787.495 kb on - strand, within MPMX20_04576 at 4787.495 kb on - strand, within MPMX20_04576 at 4787.528 kb on - strand, within MPMX20_04576 at 4787.546 kb on - strand, within MPMX20_04576 at 4787.568 kb on + strand, within MPMX20_04576 at 4787.599 kb on + strand, within MPMX20_04576 at 4787.644 kb on - strand, within MPMX20_04576 at 4787.655 kb on + strand, within MPMX20_04576 at 4787.655 kb on + strand, within MPMX20_04576 at 4787.655 kb on + strand, within MPMX20_04576 at 4787.766 kb on - strand, within MPMX20_04576 at 4787.877 kb on + strand, within MPMX20_04576 at 4787.888 kb on + strand, within MPMX20_04576 at 4787.888 kb on + strand, within MPMX20_04576 at 4787.896 kb on - strand, within MPMX20_04576 at 4787.896 kb on - strand, within MPMX20_04576 at 4787.921 kb on + strand, within MPMX20_04576 at 4787.999 kb on - strand, within MPMX20_04576
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,785,557 - MPMX20_04574 0.30 +0.1 4,785,557 - MPMX20_04574 0.30 -0.4 4,785,665 - MPMX20_04574 0.43 +0.8 4,785,666 + MPMX20_04574 0.43 +0.5 4,785,684 - MPMX20_04574 0.46 +0.2 4,785,711 - MPMX20_04574 0.49 -0.5 4,785,730 - MPMX20_04574 0.51 +0.7 4,785,760 + MPMX20_04574 0.55 +0.5 4,785,768 - MPMX20_04574 0.56 -1.8 4,785,856 + MPMX20_04574 0.66 +0.6 4,785,864 - MPMX20_04574 0.67 +2.5 4,785,864 - MPMX20_04574 0.67 -0.0 4,785,952 + MPMX20_04574 0.78 -0.7 4,786,004 + MPMX20_04574 0.84 +0.6 4,786,007 - MPMX20_04574 0.84 +0.0 4,786,063 - -0.9 4,786,136 - -0.6 4,786,157 + +0.2 4,786,157 + +0.9 4,786,157 + +0.3 4,786,391 - +2.7 4,786,452 - +0.8 4,786,463 + -0.1 4,786,493 - +1.0 4,786,525 - +0.3 4,786,527 + +0.4 4,786,527 + +0.2 4,786,527 + -0.5 4,786,532 + +0.3 4,786,535 - +0.4 4,786,540 - +0.4 4,786,607 + MPMX20_04575 0.14 -1.0 4,786,617 + MPMX20_04575 0.16 +2.6 4,786,647 - MPMX20_04575 0.21 -2.3 4,786,657 - MPMX20_04575 0.23 +0.1 4,786,675 - MPMX20_04575 0.26 -0.9 4,786,682 - MPMX20_04575 0.27 -0.4 4,786,704 - MPMX20_04575 0.31 +0.3 4,786,752 + MPMX20_04575 0.39 +3.5 4,786,762 + MPMX20_04575 0.41 -0.7 4,786,805 + MPMX20_04575 0.48 -0.7 4,786,805 - MPMX20_04575 0.48 +2.7 4,786,828 - MPMX20_04575 0.52 -0.6 4,786,837 - MPMX20_04575 0.54 -0.4 4,786,919 + MPMX20_04575 0.68 -0.4 4,786,929 + MPMX20_04575 0.69 +0.8 4,786,937 - MPMX20_04575 0.71 +3.3 4,786,967 + MPMX20_04575 0.76 -1.2 4,787,000 + MPMX20_04575 0.81 -0.5 4,787,005 + MPMX20_04575 0.82 +2.5 4,787,021 - MPMX20_04575 0.85 -1.2 4,787,094 - +2.2 4,787,193 + +0.2 4,787,193 + -0.5 4,787,234 - -1.4 4,787,417 - MPMX20_04576 0.11 -0.5 4,787,424 + MPMX20_04576 0.11 -0.1 4,787,430 + MPMX20_04576 0.11 -0.9 4,787,431 + MPMX20_04576 0.11 +1.0 4,787,431 + MPMX20_04576 0.11 -0.5 4,787,438 - MPMX20_04576 0.12 +0.7 4,787,439 - MPMX20_04576 0.12 -0.1 4,787,439 - MPMX20_04576 0.12 +0.3 4,787,441 + MPMX20_04576 0.12 -2.4 4,787,449 - MPMX20_04576 0.12 -1.3 4,787,455 - MPMX20_04576 0.12 +7.0 4,787,455 - MPMX20_04576 0.12 +0.6 4,787,472 - MPMX20_04576 0.13 -0.6 4,787,472 - MPMX20_04576 0.13 +0.0 4,787,479 - MPMX20_04576 0.13 +0.6 4,787,495 - MPMX20_04576 0.14 -1.0 4,787,495 - MPMX20_04576 0.14 +0.7 4,787,528 - MPMX20_04576 0.15 +0.2 4,787,546 - MPMX20_04576 0.16 +0.6 4,787,568 + MPMX20_04576 0.17 -1.7 4,787,599 + MPMX20_04576 0.18 -0.5 4,787,644 - MPMX20_04576 0.20 +0.6 4,787,655 + MPMX20_04576 0.21 -2.1 4,787,655 + MPMX20_04576 0.21 -0.3 4,787,655 + MPMX20_04576 0.21 +0.3 4,787,766 - MPMX20_04576 0.25 -0.4 4,787,877 + MPMX20_04576 0.30 +0.0 4,787,888 + MPMX20_04576 0.30 +0.1 4,787,888 + MPMX20_04576 0.30 -0.8 4,787,896 - MPMX20_04576 0.31 -0.4 4,787,896 - MPMX20_04576 0.31 -1.7 4,787,921 + MPMX20_04576 0.32 -2.6 4,787,999 - MPMX20_04576 0.35 +0.6
Or see this region's nucleotide sequence