Experiment: TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04336 and MPMX20_04337 are separated by 202 nucleotides MPMX20_04337 and MPMX20_04338 are separated by 135 nucleotides
MPMX20_04336: MPMX20_04336 - Leu/Ile/Val-binding protein, at 4,530,428 to 4,531,522
_04336
MPMX20_04337: MPMX20_04337 - 4-aminobutyrate aminotransferase PuuE, at 4,531,725 to 4,532,990
_04337
MPMX20_04338: MPMX20_04338 - RNA polymerase sigma factor RpoH, at 4,533,126 to 4,533,983
_04338
Position (kb)
4531
4532
4533 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4530.742 kb on - strand, within MPMX20_04336 at 4530.742 kb on - strand, within MPMX20_04336 at 4530.756 kb on + strand, within MPMX20_04336 at 4530.756 kb on + strand, within MPMX20_04336 at 4530.854 kb on - strand, within MPMX20_04336 at 4530.920 kb on - strand, within MPMX20_04336 at 4530.983 kb on + strand, within MPMX20_04336 at 4530.983 kb on + strand, within MPMX20_04336 at 4531.005 kb on - strand, within MPMX20_04336 at 4531.006 kb on - strand, within MPMX20_04336 at 4531.006 kb on - strand, within MPMX20_04336 at 4531.051 kb on + strand, within MPMX20_04336 at 4531.083 kb on + strand, within MPMX20_04336 at 4531.083 kb on + strand, within MPMX20_04336 at 4531.088 kb on + strand, within MPMX20_04336 at 4531.091 kb on - strand, within MPMX20_04336 at 4531.091 kb on - strand, within MPMX20_04336 at 4531.126 kb on + strand, within MPMX20_04336 at 4531.126 kb on + strand, within MPMX20_04336 at 4531.134 kb on - strand, within MPMX20_04336 at 4531.155 kb on - strand, within MPMX20_04336 at 4531.206 kb on + strand, within MPMX20_04336 at 4531.227 kb on + strand, within MPMX20_04336 at 4531.227 kb on + strand, within MPMX20_04336 at 4531.232 kb on + strand, within MPMX20_04336 at 4531.260 kb on + strand, within MPMX20_04336 at 4531.267 kb on + strand, within MPMX20_04336 at 4531.270 kb on - strand, within MPMX20_04336 at 4531.341 kb on + strand, within MPMX20_04336 at 4531.359 kb on + strand, within MPMX20_04336 at 4531.376 kb on + strand, within MPMX20_04336 at 4531.389 kb on - strand, within MPMX20_04336 at 4531.406 kb on + strand, within MPMX20_04336 at 4531.422 kb on - strand at 4531.450 kb on + strand at 4531.473 kb on - strand at 4531.473 kb on - strand at 4531.494 kb on + strand at 4531.497 kb on - strand at 4531.551 kb on + strand at 4531.608 kb on - strand at 4531.681 kb on + strand at 4531.715 kb on + strand at 4531.715 kb on + strand at 4531.715 kb on + strand at 4531.723 kb on - strand at 4531.723 kb on - strand at 4531.723 kb on - strand at 4531.723 kb on - strand at 4531.724 kb on - strand at 4531.730 kb on - strand at 4531.730 kb on - strand at 4531.767 kb on + strand at 4531.767 kb on + strand at 4531.767 kb on + strand at 4531.777 kb on - strand at 4531.823 kb on - strand at 4531.831 kb on - strand at 4531.863 kb on + strand, within MPMX20_04337 at 4531.863 kb on + strand, within MPMX20_04337 at 4531.863 kb on + strand, within MPMX20_04337 at 4531.871 kb on - strand, within MPMX20_04337 at 4531.872 kb on - strand, within MPMX20_04337 at 4531.931 kb on + strand, within MPMX20_04337 at 4531.977 kb on - strand, within MPMX20_04337 at 4531.981 kb on + strand, within MPMX20_04337 at 4532.006 kb on - strand, within MPMX20_04337 at 4532.032 kb on + strand, within MPMX20_04337 at 4532.063 kb on + strand, within MPMX20_04337 at 4532.064 kb on + strand, within MPMX20_04337 at 4532.112 kb on - strand, within MPMX20_04337 at 4532.128 kb on + strand, within MPMX20_04337 at 4532.134 kb on + strand, within MPMX20_04337 at 4532.226 kb on - strand, within MPMX20_04337 at 4532.369 kb on + strand, within MPMX20_04337 at 4532.419 kb on - strand, within MPMX20_04337 at 4532.455 kb on - strand, within MPMX20_04337 at 4532.466 kb on + strand, within MPMX20_04337 at 4532.499 kb on - strand, within MPMX20_04337 at 4532.567 kb on + strand, within MPMX20_04337 at 4532.603 kb on + strand, within MPMX20_04337 at 4532.617 kb on + strand, within MPMX20_04337 at 4532.625 kb on - strand, within MPMX20_04337 at 4532.662 kb on - strand, within MPMX20_04337 at 4532.662 kb on - strand, within MPMX20_04337 at 4532.699 kb on + strand, within MPMX20_04337 at 4532.699 kb on + strand, within MPMX20_04337 at 4532.745 kb on + strand, within MPMX20_04337 at 4532.753 kb on - strand, within MPMX20_04337 at 4532.771 kb on + strand, within MPMX20_04337 at 4532.773 kb on - strand, within MPMX20_04337 at 4532.830 kb on + strand, within MPMX20_04337 at 4532.922 kb on - strand at 4532.922 kb on - strand at 4532.978 kb on - strand at 4532.990 kb on - strand at 4533.015 kb on + strand at 4533.023 kb on - strand at 4533.026 kb on + strand at 4533.034 kb on - strand at 4533.912 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,530,742 - MPMX20_04336 0.29 -0.9 4,530,742 - MPMX20_04336 0.29 -0.6 4,530,756 + MPMX20_04336 0.30 +0.3 4,530,756 + MPMX20_04336 0.30 +2.2 4,530,854 - MPMX20_04336 0.39 +0.2 4,530,920 - MPMX20_04336 0.45 +3.1 4,530,983 + MPMX20_04336 0.51 -1.5 4,530,983 + MPMX20_04336 0.51 -0.9 4,531,005 - MPMX20_04336 0.53 +1.6 4,531,006 - MPMX20_04336 0.53 +0.1 4,531,006 - MPMX20_04336 0.53 -0.7 4,531,051 + MPMX20_04336 0.57 +0.4 4,531,083 + MPMX20_04336 0.60 +0.3 4,531,083 + MPMX20_04336 0.60 -1.4 4,531,088 + MPMX20_04336 0.60 -0.4 4,531,091 - MPMX20_04336 0.61 -0.2 4,531,091 - MPMX20_04336 0.61 -0.4 4,531,126 + MPMX20_04336 0.64 -1.4 4,531,126 + MPMX20_04336 0.64 -0.9 4,531,134 - MPMX20_04336 0.64 -1.4 4,531,155 - MPMX20_04336 0.66 -0.7 4,531,206 + MPMX20_04336 0.71 +0.9 4,531,227 + MPMX20_04336 0.73 +0.4 4,531,227 + MPMX20_04336 0.73 -0.1 4,531,232 + MPMX20_04336 0.73 +1.1 4,531,260 + MPMX20_04336 0.76 +0.6 4,531,267 + MPMX20_04336 0.77 +0.6 4,531,270 - MPMX20_04336 0.77 -1.2 4,531,341 + MPMX20_04336 0.83 +0.3 4,531,359 + MPMX20_04336 0.85 +1.6 4,531,376 + MPMX20_04336 0.87 +0.1 4,531,389 - MPMX20_04336 0.88 +2.2 4,531,406 + MPMX20_04336 0.89 +1.2 4,531,422 - +0.4 4,531,450 + -0.5 4,531,473 - +2.1 4,531,473 - +0.8 4,531,494 + -0.9 4,531,497 - +1.1 4,531,551 + -0.1 4,531,608 - +0.6 4,531,681 + -0.1 4,531,715 + -1.3 4,531,715 + +0.6 4,531,715 + -0.5 4,531,723 - +1.2 4,531,723 - +0.1 4,531,723 - -0.1 4,531,723 - +0.5 4,531,724 - +1.0 4,531,730 - +0.4 4,531,730 - +1.6 4,531,767 + -0.4 4,531,767 + +1.2 4,531,767 + -0.1 4,531,777 - -0.8 4,531,823 - +0.0 4,531,831 - -1.5 4,531,863 + MPMX20_04337 0.11 -0.9 4,531,863 + MPMX20_04337 0.11 -0.7 4,531,863 + MPMX20_04337 0.11 -0.1 4,531,871 - MPMX20_04337 0.12 -0.9 4,531,872 - MPMX20_04337 0.12 +0.5 4,531,931 + MPMX20_04337 0.16 +1.3 4,531,977 - MPMX20_04337 0.20 -0.9 4,531,981 + MPMX20_04337 0.20 -1.7 4,532,006 - MPMX20_04337 0.22 -0.2 4,532,032 + MPMX20_04337 0.24 -1.4 4,532,063 + MPMX20_04337 0.27 -1.6 4,532,064 + MPMX20_04337 0.27 -0.7 4,532,112 - MPMX20_04337 0.31 -0.1 4,532,128 + MPMX20_04337 0.32 +0.2 4,532,134 + MPMX20_04337 0.32 -0.1 4,532,226 - MPMX20_04337 0.40 +0.1 4,532,369 + MPMX20_04337 0.51 +0.9 4,532,419 - MPMX20_04337 0.55 -0.6 4,532,455 - MPMX20_04337 0.58 -0.7 4,532,466 + MPMX20_04337 0.59 -1.2 4,532,499 - MPMX20_04337 0.61 +1.6 4,532,567 + MPMX20_04337 0.67 -1.6 4,532,603 + MPMX20_04337 0.69 -0.5 4,532,617 + MPMX20_04337 0.70 +0.5 4,532,625 - MPMX20_04337 0.71 -0.7 4,532,662 - MPMX20_04337 0.74 +0.3 4,532,662 - MPMX20_04337 0.74 +0.6 4,532,699 + MPMX20_04337 0.77 -0.2 4,532,699 + MPMX20_04337 0.77 -0.2 4,532,745 + MPMX20_04337 0.81 +0.3 4,532,753 - MPMX20_04337 0.81 +1.0 4,532,771 + MPMX20_04337 0.83 +0.3 4,532,773 - MPMX20_04337 0.83 +0.9 4,532,830 + MPMX20_04337 0.87 -1.7 4,532,922 - -0.7 4,532,922 - +1.3 4,532,978 - +1.6 4,532,990 - -0.1 4,533,015 + +1.0 4,533,023 - +0.2 4,533,026 + +1.5 4,533,034 - +2.1 4,533,912 - +0.1
Or see this region's nucleotide sequence