Experiment: TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03322 and MPMX20_03323 overlap by 1 nucleotides MPMX20_03323 and MPMX20_03324 are separated by 18 nucleotides
MPMX20_03322: MPMX20_03322 - N-acetylmuramoyl-L-alanine amidase AmiA, at 3,489,629 to 3,490,504
_03322
MPMX20_03323: MPMX20_03323 - Oxygen-dependent coproporphyrinogen-III oxidase, at 3,490,504 to 3,491,403
_03323
MPMX20_03324: MPMX20_03324 - NADP-dependent malic enzyme, at 3,491,422 to 3,493,701
_03324
Position (kb)
3490
3491
3492 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 3489.575 kb on - strand at 3489.590 kb on + strand at 3489.644 kb on - strand at 3489.695 kb on + strand at 3489.732 kb on - strand, within MPMX20_03322 at 3489.802 kb on + strand, within MPMX20_03322 at 3489.802 kb on + strand, within MPMX20_03322 at 3489.810 kb on - strand, within MPMX20_03322 at 3489.816 kb on - strand, within MPMX20_03322 at 3489.892 kb on - strand, within MPMX20_03322 at 3489.971 kb on - strand, within MPMX20_03322 at 3490.008 kb on + strand, within MPMX20_03322 at 3490.075 kb on - strand, within MPMX20_03322 at 3490.084 kb on + strand, within MPMX20_03322 at 3490.092 kb on - strand, within MPMX20_03322 at 3490.213 kb on - strand, within MPMX20_03322 at 3490.236 kb on + strand, within MPMX20_03322 at 3490.275 kb on - strand, within MPMX20_03322 at 3490.332 kb on - strand, within MPMX20_03322 at 3490.405 kb on - strand, within MPMX20_03322 at 3490.445 kb on + strand at 3490.509 kb on + strand at 3490.580 kb on - strand at 3490.650 kb on + strand, within MPMX20_03323 at 3490.741 kb on + strand, within MPMX20_03323 at 3490.758 kb on - strand, within MPMX20_03323 at 3490.807 kb on - strand, within MPMX20_03323 at 3490.851 kb on + strand, within MPMX20_03323 at 3490.856 kb on + strand, within MPMX20_03323 at 3490.904 kb on + strand, within MPMX20_03323 at 3491.110 kb on - strand, within MPMX20_03323 at 3491.120 kb on + strand, within MPMX20_03323 at 3491.125 kb on + strand, within MPMX20_03323 at 3491.139 kb on - strand, within MPMX20_03323 at 3491.174 kb on + strand, within MPMX20_03323 at 3491.245 kb on - strand, within MPMX20_03323 at 3491.334 kb on - strand at 3491.344 kb on + strand at 3491.355 kb on + strand at 3491.394 kb on - strand at 3491.398 kb on + strand at 3491.521 kb on - strand at 3491.527 kb on + strand at 3491.535 kb on - strand at 3491.538 kb on + strand at 3491.538 kb on + strand at 3491.552 kb on - strand at 3491.561 kb on - strand at 3491.595 kb on - strand at 3491.680 kb on - strand, within MPMX20_03324 at 3491.687 kb on + strand, within MPMX20_03324 at 3491.823 kb on + strand, within MPMX20_03324 at 3491.995 kb on + strand, within MPMX20_03324 at 3492.013 kb on - strand, within MPMX20_03324 at 3492.043 kb on + strand, within MPMX20_03324 at 3492.051 kb on - strand, within MPMX20_03324 at 3492.051 kb on - strand, within MPMX20_03324 at 3492.103 kb on - strand, within MPMX20_03324 at 3492.131 kb on - strand, within MPMX20_03324 at 3492.168 kb on - strand, within MPMX20_03324 at 3492.175 kb on - strand, within MPMX20_03324 at 3492.303 kb on + strand, within MPMX20_03324
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,489,575 - -0.7 3,489,590 + -0.5 3,489,644 - +0.7 3,489,695 + +0.7 3,489,732 - MPMX20_03322 0.12 -0.2 3,489,802 + MPMX20_03322 0.20 +2.8 3,489,802 + MPMX20_03322 0.20 +0.2 3,489,810 - MPMX20_03322 0.21 +1.1 3,489,816 - MPMX20_03322 0.21 +1.7 3,489,892 - MPMX20_03322 0.30 +0.3 3,489,971 - MPMX20_03322 0.39 -0.0 3,490,008 + MPMX20_03322 0.43 -0.1 3,490,075 - MPMX20_03322 0.51 -0.4 3,490,084 + MPMX20_03322 0.52 +0.1 3,490,092 - MPMX20_03322 0.53 -0.7 3,490,213 - MPMX20_03322 0.67 +2.2 3,490,236 + MPMX20_03322 0.69 +2.7 3,490,275 - MPMX20_03322 0.74 -0.7 3,490,332 - MPMX20_03322 0.80 +0.0 3,490,405 - MPMX20_03322 0.89 +1.1 3,490,445 + -0.2 3,490,509 + -1.0 3,490,580 - +0.2 3,490,650 + MPMX20_03323 0.16 +0.1 3,490,741 + MPMX20_03323 0.26 -1.7 3,490,758 - MPMX20_03323 0.28 +0.3 3,490,807 - MPMX20_03323 0.34 -0.1 3,490,851 + MPMX20_03323 0.39 -0.7 3,490,856 + MPMX20_03323 0.39 +1.3 3,490,904 + MPMX20_03323 0.44 +0.1 3,491,110 - MPMX20_03323 0.67 -0.7 3,491,120 + MPMX20_03323 0.68 +1.0 3,491,125 + MPMX20_03323 0.69 +6.4 3,491,139 - MPMX20_03323 0.71 -2.0 3,491,174 + MPMX20_03323 0.74 -2.5 3,491,245 - MPMX20_03323 0.82 -1.1 3,491,334 - +2.2 3,491,344 + -0.6 3,491,355 + -1.9 3,491,394 - -1.8 3,491,398 + +0.7 3,491,521 - +0.1 3,491,527 + +0.7 3,491,535 - -0.1 3,491,538 + -0.1 3,491,538 + +2.7 3,491,552 - -2.2 3,491,561 - -1.0 3,491,595 - +0.3 3,491,680 - MPMX20_03324 0.11 +0.7 3,491,687 + MPMX20_03324 0.12 -0.5 3,491,823 + MPMX20_03324 0.18 +0.1 3,491,995 + MPMX20_03324 0.25 -0.4 3,492,013 - MPMX20_03324 0.26 +0.2 3,492,043 + MPMX20_03324 0.27 +0.7 3,492,051 - MPMX20_03324 0.28 +0.7 3,492,051 - MPMX20_03324 0.28 +0.7 3,492,103 - MPMX20_03324 0.30 +0.2 3,492,131 - MPMX20_03324 0.31 +1.9 3,492,168 - MPMX20_03324 0.33 +0.7 3,492,175 - MPMX20_03324 0.33 -0.8 3,492,303 + MPMX20_03324 0.39 +0.2
Or see this region's nucleotide sequence