Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02000

Experiment: TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01998 and MPMX20_01999 are separated by 93 nucleotidesMPMX20_01999 and MPMX20_02000 are separated by 42 nucleotidesMPMX20_02000 and MPMX20_02001 are separated by 125 nucleotides MPMX20_01998: MPMX20_01998 - Anhydro-N-acetylmuramic acid kinase, at 2,087,614 to 2,088,738 _01998 MPMX20_01999: MPMX20_01999 - Membrane-bound lysozyme inhibitor of C-type lysozyme, at 2,088,832 to 2,089,155 _01999 MPMX20_02000: MPMX20_02000 - Pyridoxine/pyridoxamine 5'-phosphate oxidase, at 2,089,198 to 2,089,869 _02000 MPMX20_02001: MPMX20_02001 - Tyrosine--tRNA ligase, at 2,089,995 to 2,091,269 _02001 Position (kb) 2089 2090Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 2088.333 kb on - strand, within MPMX20_01998at 2088.428 kb on + strand, within MPMX20_01998at 2088.489 kb on + strand, within MPMX20_01998at 2088.497 kb on - strand, within MPMX20_01998at 2088.513 kb on + strand, within MPMX20_01998at 2088.540 kb on - strand, within MPMX20_01998at 2088.551 kb on + strand, within MPMX20_01998at 2088.687 kb on - strandat 2088.687 kb on - strandat 2088.687 kb on - strandat 2088.791 kb on + strandat 2088.791 kb on + strandat 2088.799 kb on + strandat 2088.799 kb on + strandat 2088.799 kb on - strandat 2088.807 kb on - strandat 2088.822 kb on + strandat 2088.822 kb on + strandat 2088.859 kb on + strandat 2088.867 kb on - strand, within MPMX20_01999at 2088.892 kb on - strand, within MPMX20_01999at 2088.912 kb on + strand, within MPMX20_01999at 2088.920 kb on + strand, within MPMX20_01999at 2088.920 kb on - strand, within MPMX20_01999at 2088.928 kb on - strand, within MPMX20_01999at 2088.928 kb on - strand, within MPMX20_01999at 2088.953 kb on + strand, within MPMX20_01999at 2088.953 kb on + strand, within MPMX20_01999at 2088.958 kb on + strand, within MPMX20_01999at 2088.961 kb on - strand, within MPMX20_01999at 2088.961 kb on - strand, within MPMX20_01999at 2088.961 kb on - strand, within MPMX20_01999at 2088.966 kb on - strand, within MPMX20_01999at 2089.013 kb on + strand, within MPMX20_01999at 2089.013 kb on + strand, within MPMX20_01999at 2089.013 kb on + strand, within MPMX20_01999at 2089.013 kb on + strand, within MPMX20_01999at 2089.021 kb on - strand, within MPMX20_01999at 2089.021 kb on - strand, within MPMX20_01999at 2089.021 kb on - strand, within MPMX20_01999at 2089.021 kb on - strand, within MPMX20_01999at 2089.021 kb on - strand, within MPMX20_01999at 2089.021 kb on - strand, within MPMX20_01999at 2089.021 kb on - strand, within MPMX20_01999at 2089.052 kb on - strand, within MPMX20_01999at 2089.053 kb on - strand, within MPMX20_01999at 2089.112 kb on + strand, within MPMX20_01999at 2089.120 kb on - strand, within MPMX20_01999at 2089.120 kb on - strand, within MPMX20_01999at 2089.177 kb on + strandat 2089.177 kb on + strandat 2089.185 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,088,333 - MPMX20_01998 0.64 -1.3
2,088,428 + MPMX20_01998 0.72 -1.0
2,088,489 + MPMX20_01998 0.78 +1.6
2,088,497 - MPMX20_01998 0.78 -0.2
2,088,513 + MPMX20_01998 0.80 +3.9
2,088,540 - MPMX20_01998 0.82 -0.9
2,088,551 + MPMX20_01998 0.83 +0.2
2,088,687 - -0.9
2,088,687 - +0.1
2,088,687 - -1.9
2,088,791 + +1.3
2,088,791 + -0.7
2,088,799 + +3.5
2,088,799 + -0.7
2,088,799 - -1.0
2,088,807 - +2.2
2,088,822 + -0.6
2,088,822 + -0.4
2,088,859 + +0.3
2,088,867 - MPMX20_01999 0.11 -0.4
2,088,892 - MPMX20_01999 0.19 -1.1
2,088,912 + MPMX20_01999 0.25 -0.7
2,088,920 + MPMX20_01999 0.27 -0.3
2,088,920 - MPMX20_01999 0.27 +0.1
2,088,928 - MPMX20_01999 0.30 -0.8
2,088,928 - MPMX20_01999 0.30 -1.2
2,088,953 + MPMX20_01999 0.37 +0.7
2,088,953 + MPMX20_01999 0.37 +0.5
2,088,958 + MPMX20_01999 0.39 +2.4
2,088,961 - MPMX20_01999 0.40 +0.3
2,088,961 - MPMX20_01999 0.40 +0.9
2,088,961 - MPMX20_01999 0.40 -0.5
2,088,966 - MPMX20_01999 0.41 +0.6
2,089,013 + MPMX20_01999 0.56 +0.5
2,089,013 + MPMX20_01999 0.56 -0.2
2,089,013 + MPMX20_01999 0.56 +3.6
2,089,013 + MPMX20_01999 0.56 -1.0
2,089,021 - MPMX20_01999 0.58 +0.0
2,089,021 - MPMX20_01999 0.58 +2.1
2,089,021 - MPMX20_01999 0.58 -0.6
2,089,021 - MPMX20_01999 0.58 -0.1
2,089,021 - MPMX20_01999 0.58 -0.7
2,089,021 - MPMX20_01999 0.58 +1.1
2,089,021 - MPMX20_01999 0.58 -0.4
2,089,052 - MPMX20_01999 0.68 +1.1
2,089,053 - MPMX20_01999 0.68 +0.7
2,089,112 + MPMX20_01999 0.86 +0.2
2,089,120 - MPMX20_01999 0.89 +5.3
2,089,120 - MPMX20_01999 0.89 -1.5
2,089,177 + +0.8
2,089,177 + +1.9
2,089,185 - -1.4

Or see this region's nucleotide sequence