Experiment: M9 plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00741 and MPMX20_00742 are separated by 105 nucleotides MPMX20_00742 and MPMX20_00743 overlap by 8 nucleotides MPMX20_00743 and MPMX20_00744 are separated by 114 nucleotides MPMX20_00744 and MPMX20_00745 are separated by 39 nucleotides
MPMX20_00741: MPMX20_00741 - putative lipoprotein YgdR, at 767,675 to 767,908
_00741
MPMX20_00742: MPMX20_00742 - Glutathione-regulated potassium-efflux system ancillary protein KefF, at 768,014 to 768,544
_00742
MPMX20_00743: MPMX20_00743 - Glutathione-regulated potassium-efflux system protein KefC, at 768,537 to 770,402
_00743
MPMX20_00744: MPMX20_00744 - IS1595 family transposase ISSsu9, at 770,517 to 770,996
_00744
MPMX20_00745: MPMX20_00745 - Bis(5'-nucleosyl)-tetraphosphatase, symmetrical, at 771,036 to 771,884
_00745
Position (kb) 768
769
770
771 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 767.553 kb on + strand at 767.588 kb on - strand at 767.607 kb on + strand at 767.638 kb on - strand at 767.653 kb on + strand at 767.661 kb on - strand at 767.661 kb on - strand at 767.671 kb on - strand at 767.673 kb on - strand at 767.697 kb on + strand at 767.705 kb on - strand, within MPMX20_00741 at 767.723 kb on - strand, within MPMX20_00741 at 767.729 kb on - strand, within MPMX20_00741 at 767.806 kb on - strand, within MPMX20_00741 at 767.853 kb on + strand, within MPMX20_00741 at 767.858 kb on + strand, within MPMX20_00741 at 767.858 kb on + strand, within MPMX20_00741 at 767.861 kb on - strand, within MPMX20_00741 at 767.863 kb on + strand, within MPMX20_00741 at 767.863 kb on + strand, within MPMX20_00741 at 767.863 kb on + strand, within MPMX20_00741 at 767.868 kb on + strand, within MPMX20_00741 at 767.871 kb on - strand, within MPMX20_00741 at 767.876 kb on - strand, within MPMX20_00741 at 767.876 kb on - strand, within MPMX20_00741 at 767.876 kb on - strand, within MPMX20_00741 at 767.876 kb on - strand, within MPMX20_00741 at 767.878 kb on + strand, within MPMX20_00741 at 767.878 kb on + strand, within MPMX20_00741 at 767.878 kb on + strand, within MPMX20_00741 at 767.878 kb on + strand, within MPMX20_00741 at 767.878 kb on + strand, within MPMX20_00741 at 767.878 kb on + strand, within MPMX20_00741 at 767.878 kb on + strand, within MPMX20_00741 at 767.878 kb on + strand, within MPMX20_00741 at 767.878 kb on + strand, within MPMX20_00741 at 767.886 kb on - strand at 767.907 kb on + strand at 767.908 kb on + strand at 767.945 kb on + strand at 767.945 kb on + strand at 767.945 kb on + strand at 767.945 kb on + strand at 767.945 kb on + strand at 767.945 kb on + strand at 767.945 kb on + strand at 767.953 kb on - strand at 768.060 kb on + strand at 768.072 kb on + strand, within MPMX20_00742 at 768.082 kb on + strand, within MPMX20_00742 at 768.082 kb on + strand, within MPMX20_00742 at 768.082 kb on + strand, within MPMX20_00742 at 768.090 kb on - strand, within MPMX20_00742 at 768.167 kb on + strand, within MPMX20_00742 at 768.214 kb on + strand, within MPMX20_00742 at 768.214 kb on + strand, within MPMX20_00742 at 768.217 kb on + strand, within MPMX20_00742 at 768.222 kb on - strand, within MPMX20_00742 at 768.222 kb on - strand, within MPMX20_00742 at 768.222 kb on - strand, within MPMX20_00742 at 768.222 kb on - strand, within MPMX20_00742 at 768.227 kb on - strand, within MPMX20_00742 at 768.230 kb on - strand, within MPMX20_00742 at 768.313 kb on + strand, within MPMX20_00742 at 768.380 kb on - strand, within MPMX20_00742 at 768.380 kb on - strand, within MPMX20_00742 at 768.409 kb on + strand, within MPMX20_00742 at 768.414 kb on + strand, within MPMX20_00742 at 768.419 kb on + strand, within MPMX20_00742 at 768.422 kb on - strand, within MPMX20_00742 at 768.427 kb on - strand, within MPMX20_00742 at 768.451 kb on + strand, within MPMX20_00742 at 768.544 kb on + strand at 768.552 kb on - strand at 768.552 kb on - strand at 768.566 kb on + strand at 768.590 kb on + strand at 768.618 kb on - strand at 768.627 kb on + strand at 768.632 kb on + strand at 768.635 kb on - strand at 768.745 kb on - strand, within MPMX20_00743 at 768.755 kb on + strand, within MPMX20_00743 at 768.780 kb on - strand, within MPMX20_00743 at 768.787 kb on + strand, within MPMX20_00743 at 768.815 kb on - strand, within MPMX20_00743 at 768.831 kb on - strand, within MPMX20_00743 at 768.890 kb on - strand, within MPMX20_00743 at 768.951 kb on - strand, within MPMX20_00743 at 768.979 kb on + strand, within MPMX20_00743 at 769.181 kb on + strand, within MPMX20_00743 at 769.222 kb on + strand, within MPMX20_00743 at 769.289 kb on - strand, within MPMX20_00743 at 769.297 kb on + strand, within MPMX20_00743 at 769.297 kb on + strand, within MPMX20_00743 at 769.297 kb on + strand, within MPMX20_00743 at 769.297 kb on + strand, within MPMX20_00743 at 769.297 kb on + strand, within MPMX20_00743 at 769.297 kb on - strand, within MPMX20_00743 at 769.305 kb on - strand, within MPMX20_00743 at 769.305 kb on - strand, within MPMX20_00743 at 769.305 kb on - strand, within MPMX20_00743 at 769.372 kb on + strand, within MPMX20_00743 at 769.380 kb on - strand, within MPMX20_00743 at 769.486 kb on + strand, within MPMX20_00743 at 769.506 kb on - strand, within MPMX20_00743 at 769.594 kb on - strand, within MPMX20_00743 at 769.642 kb on - strand, within MPMX20_00743 at 769.723 kb on + strand, within MPMX20_00743 at 769.816 kb on + strand, within MPMX20_00743 at 769.838 kb on + strand, within MPMX20_00743 at 769.839 kb on + strand, within MPMX20_00743 at 769.847 kb on - strand, within MPMX20_00743 at 769.899 kb on + strand, within MPMX20_00743 at 769.944 kb on + strand, within MPMX20_00743 at 769.999 kb on + strand, within MPMX20_00743 at 769.999 kb on + strand, within MPMX20_00743 at 770.007 kb on - strand, within MPMX20_00743 at 770.067 kb on - strand, within MPMX20_00743 at 770.073 kb on - strand, within MPMX20_00743 at 770.098 kb on - strand, within MPMX20_00743 at 770.102 kb on + strand, within MPMX20_00743 at 770.199 kb on + strand, within MPMX20_00743 at 770.215 kb on - strand, within MPMX20_00743 at 770.319 kb on - strand at 770.346 kb on - strand at 770.456 kb on - strand at 771.024 kb on + strand at 771.123 kb on + strand, within MPMX20_00745 at 771.123 kb on + strand, within MPMX20_00745 at 771.123 kb on + strand, within MPMX20_00745 at 771.131 kb on - strand, within MPMX20_00745 at 771.131 kb on - strand, within MPMX20_00745 at 771.178 kb on - strand, within MPMX20_00745 at 771.234 kb on - strand, within MPMX20_00745 at 771.372 kb on + strand, within MPMX20_00745 at 771.380 kb on - strand, within MPMX20_00745
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 767,553 + +0.3 767,588 - -0.5 767,607 + +0.2 767,638 - -0.4 767,653 + -2.3 767,661 - +0.3 767,661 - +2.8 767,671 - -0.4 767,673 - +0.3 767,697 + -1.3 767,705 - MPMX20_00741 0.13 -0.4 767,723 - MPMX20_00741 0.21 +0.5 767,729 - MPMX20_00741 0.23 +0.6 767,806 - MPMX20_00741 0.56 -1.0 767,853 + MPMX20_00741 0.76 -0.0 767,858 + MPMX20_00741 0.78 +0.8 767,858 + MPMX20_00741 0.78 +1.3 767,861 - MPMX20_00741 0.79 +0.4 767,863 + MPMX20_00741 0.80 -1.0 767,863 + MPMX20_00741 0.80 -0.2 767,863 + MPMX20_00741 0.80 +0.9 767,868 + MPMX20_00741 0.82 -0.7 767,871 - MPMX20_00741 0.84 -1.9 767,876 - MPMX20_00741 0.86 -0.9 767,876 - MPMX20_00741 0.86 -0.6 767,876 - MPMX20_00741 0.86 -0.6 767,876 - MPMX20_00741 0.86 +0.3 767,878 + MPMX20_00741 0.87 -0.9 767,878 + MPMX20_00741 0.87 -1.7 767,878 + MPMX20_00741 0.87 +1.3 767,878 + MPMX20_00741 0.87 +0.7 767,878 + MPMX20_00741 0.87 +0.2 767,878 + MPMX20_00741 0.87 +0.6 767,878 + MPMX20_00741 0.87 +2.6 767,878 + MPMX20_00741 0.87 -0.4 767,878 + MPMX20_00741 0.87 +1.0 767,886 - +0.3 767,907 + +3.2 767,908 + +1.3 767,945 + +0.8 767,945 + -0.5 767,945 + +0.4 767,945 + -0.7 767,945 + +0.1 767,945 + +0.1 767,945 + -0.5 767,953 - +1.4 768,060 + +0.8 768,072 + MPMX20_00742 0.11 +0.3 768,082 + MPMX20_00742 0.13 +0.6 768,082 + MPMX20_00742 0.13 +4.3 768,082 + MPMX20_00742 0.13 -0.7 768,090 - MPMX20_00742 0.14 +1.9 768,167 + MPMX20_00742 0.29 +0.5 768,214 + MPMX20_00742 0.38 -0.5 768,214 + MPMX20_00742 0.38 +1.3 768,217 + MPMX20_00742 0.38 -2.0 768,222 - MPMX20_00742 0.39 -0.5 768,222 - MPMX20_00742 0.39 -0.7 768,222 - MPMX20_00742 0.39 -0.1 768,222 - MPMX20_00742 0.39 -1.6 768,227 - MPMX20_00742 0.40 -0.3 768,230 - MPMX20_00742 0.41 +0.6 768,313 + MPMX20_00742 0.56 -1.0 768,380 - MPMX20_00742 0.69 -1.2 768,380 - MPMX20_00742 0.69 -0.0 768,409 + MPMX20_00742 0.74 +2.5 768,414 + MPMX20_00742 0.75 +0.8 768,419 + MPMX20_00742 0.76 +0.4 768,422 - MPMX20_00742 0.77 +1.3 768,427 - MPMX20_00742 0.78 -1.3 768,451 + MPMX20_00742 0.82 -1.1 768,544 + -1.5 768,552 - -0.3 768,552 - +1.3 768,566 + +2.4 768,590 + -1.6 768,618 - +0.5 768,627 + +0.3 768,632 + -1.2 768,635 - -0.2 768,745 - MPMX20_00743 0.11 -1.0 768,755 + MPMX20_00743 0.12 +3.5 768,780 - MPMX20_00743 0.13 +0.3 768,787 + MPMX20_00743 0.13 +2.3 768,815 - MPMX20_00743 0.15 -1.2 768,831 - MPMX20_00743 0.16 -0.1 768,890 - MPMX20_00743 0.19 -0.5 768,951 - MPMX20_00743 0.22 +0.3 768,979 + MPMX20_00743 0.24 -0.0 769,181 + MPMX20_00743 0.35 -0.4 769,222 + MPMX20_00743 0.37 +0.4 769,289 - MPMX20_00743 0.40 -0.3 769,297 + MPMX20_00743 0.41 +0.4 769,297 + MPMX20_00743 0.41 +2.3 769,297 + MPMX20_00743 0.41 +1.6 769,297 + MPMX20_00743 0.41 +1.3 769,297 + MPMX20_00743 0.41 +0.2 769,297 - MPMX20_00743 0.41 -1.5 769,305 - MPMX20_00743 0.41 +2.6 769,305 - MPMX20_00743 0.41 +1.3 769,305 - MPMX20_00743 0.41 -0.7 769,372 + MPMX20_00743 0.45 +0.7 769,380 - MPMX20_00743 0.45 +0.1 769,486 + MPMX20_00743 0.51 -0.1 769,506 - MPMX20_00743 0.52 -0.7 769,594 - MPMX20_00743 0.57 -0.7 769,642 - MPMX20_00743 0.59 +0.6 769,723 + MPMX20_00743 0.64 -0.1 769,816 + MPMX20_00743 0.69 +1.9 769,838 + MPMX20_00743 0.70 -0.6 769,839 + MPMX20_00743 0.70 +0.3 769,847 - MPMX20_00743 0.70 +5.1 769,899 + MPMX20_00743 0.73 +0.3 769,944 + MPMX20_00743 0.75 +1.4 769,999 + MPMX20_00743 0.78 +0.2 769,999 + MPMX20_00743 0.78 -0.5 770,007 - MPMX20_00743 0.79 +0.1 770,067 - MPMX20_00743 0.82 +1.3 770,073 - MPMX20_00743 0.82 +0.7 770,098 - MPMX20_00743 0.84 -0.0 770,102 + MPMX20_00743 0.84 -0.1 770,199 + MPMX20_00743 0.89 -0.0 770,215 - MPMX20_00743 0.90 -1.3 770,319 - -0.7 770,346 - -0.5 770,456 - -1.5 771,024 + +0.1 771,123 + MPMX20_00745 0.10 -0.7 771,123 + MPMX20_00745 0.10 -1.7 771,123 + MPMX20_00745 0.10 -2.9 771,131 - MPMX20_00745 0.11 -1.5 771,131 - MPMX20_00745 0.11 -1.0 771,178 - MPMX20_00745 0.17 -2.2 771,234 - MPMX20_00745 0.23 -1.0 771,372 + MPMX20_00745 0.40 +2.8 771,380 - MPMX20_00745 0.41 -1.0
Or see this region's nucleotide sequence