Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02534

Experiment: 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02533 and MPMX20_02534 are separated by 130 nucleotidesMPMX20_02534 and MPMX20_02535 are separated by 38 nucleotides MPMX20_02533: MPMX20_02533 - cAMP-activated global transcriptional regulator CRP, at 2,672,715 to 2,673,380 _02533 MPMX20_02534: MPMX20_02534 - hypothetical protein, at 2,673,511 to 2,673,645 _02534 MPMX20_02535: MPMX20_02535 - Pyrimidine-specific ribonucleoside hydrolase RihB, at 2,673,684 to 2,674,649 _02535 MPMX20_02536: MPMX20_02536 - Adenosine deaminase, at 2,674,639 to 2,675,622 _02536 Position (kb) 2673 2674Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2673.781 kb on + strand, within MPMX20_02535at 2673.805 kb on - strand, within MPMX20_02535at 2674.315 kb on - strand, within MPMX20_02535at 2674.401 kb on + strand, within MPMX20_02535at 2674.412 kb on + strand, within MPMX20_02535

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,673,781 + MPMX20_02535 0.10 -3.1
2,673,805 - MPMX20_02535 0.13 +3.1
2,674,315 - MPMX20_02535 0.65 +1.6
2,674,401 + MPMX20_02535 0.74 +0.1
2,674,412 + MPMX20_02535 0.75 +2.0

Or see this region's nucleotide sequence