Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01889

Experiment: 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01887 and MPMX20_01888 are separated by 148 nucleotidesMPMX20_01888 and MPMX20_01889 are separated by 36 nucleotidesMPMX20_01889 and MPMX20_01890 are separated by 105 nucleotidesMPMX20_01890 and MPMX20_01891 are separated by 105 nucleotides MPMX20_01887: MPMX20_01887 - Hexitol phosphatase B, at 1,980,458 to 1,981,129 _01887 MPMX20_01888: MPMX20_01888 - hypothetical protein, at 1,981,278 to 1,981,814 _01888 MPMX20_01889: MPMX20_01889 - putative ketoamine kinase, at 1,981,851 to 1,982,711 _01889 MPMX20_01890: MPMX20_01890 - hypothetical protein, at 1,982,817 to 1,983,107 _01890 MPMX20_01891: MPMX20_01891 - ATP-dependent 6-phosphofructokinase isozyme 2, at 1,983,213 to 1,984,145 _01891 Position (kb) 1981 1982 1983Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 1980.872 kb on - strand, within MPMX20_01887at 1980.929 kb on - strand, within MPMX20_01887at 1980.929 kb on - strand, within MPMX20_01887at 1980.976 kb on + strand, within MPMX20_01887at 1980.976 kb on + strand, within MPMX20_01887at 1980.984 kb on - strand, within MPMX20_01887at 1981.015 kb on - strand, within MPMX20_01887at 1981.130 kb on - strandat 1981.139 kb on + strandat 1981.140 kb on + strandat 1981.143 kb on + strandat 1981.151 kb on + strandat 1981.151 kb on + strandat 1981.153 kb on + strandat 1981.159 kb on - strandat 1981.201 kb on + strandat 1981.201 kb on + strandat 1981.209 kb on - strandat 1981.244 kb on + strandat 1981.367 kb on - strand, within MPMX20_01888at 1981.554 kb on + strand, within MPMX20_01888at 1981.583 kb on + strand, within MPMX20_01888at 1981.591 kb on - strand, within MPMX20_01888at 1981.596 kb on + strand, within MPMX20_01888at 1981.630 kb on + strand, within MPMX20_01888at 1981.630 kb on - strand, within MPMX20_01888at 1981.674 kb on + strand, within MPMX20_01888at 1981.674 kb on + strand, within MPMX20_01888at 1981.707 kb on + strand, within MPMX20_01888at 1981.710 kb on - strand, within MPMX20_01888at 1981.816 kb on - strandat 1981.849 kb on - strandat 1981.898 kb on - strandat 1981.923 kb on + strandat 1981.923 kb on + strandat 1981.923 kb on + strandat 1981.923 kb on + strandat 1981.933 kb on + strandat 1981.933 kb on + strandat 1981.933 kb on + strandat 1981.941 kb on - strand, within MPMX20_01889at 1981.990 kb on + strand, within MPMX20_01889at 1981.998 kb on - strand, within MPMX20_01889at 1982.065 kb on - strand, within MPMX20_01889at 1982.128 kb on - strand, within MPMX20_01889at 1982.152 kb on + strand, within MPMX20_01889at 1982.161 kb on - strand, within MPMX20_01889at 1982.224 kb on + strand, within MPMX20_01889at 1982.224 kb on - strand, within MPMX20_01889at 1982.224 kb on - strand, within MPMX20_01889at 1982.307 kb on - strand, within MPMX20_01889at 1982.314 kb on + strand, within MPMX20_01889at 1982.314 kb on - strand, within MPMX20_01889at 1982.324 kb on - strand, within MPMX20_01889at 1982.455 kb on + strand, within MPMX20_01889at 1982.472 kb on + strand, within MPMX20_01889at 1982.472 kb on + strand, within MPMX20_01889at 1982.479 kb on + strand, within MPMX20_01889at 1982.479 kb on + strand, within MPMX20_01889at 1982.479 kb on + strand, within MPMX20_01889at 1982.479 kb on + strand, within MPMX20_01889at 1982.480 kb on - strand, within MPMX20_01889at 1982.487 kb on - strand, within MPMX20_01889at 1982.487 kb on - strand, within MPMX20_01889at 1982.487 kb on - strand, within MPMX20_01889at 1982.522 kb on + strand, within MPMX20_01889at 1982.569 kb on - strand, within MPMX20_01889at 1982.673 kb on - strandat 1982.675 kb on + strandat 1982.691 kb on - strandat 1982.786 kb on + strandat 1982.788 kb on + strandat 1982.788 kb on + strandat 1982.788 kb on + strandat 1982.794 kb on - strandat 1982.794 kb on - strandat 1982.796 kb on + strandat 1982.796 kb on + strandat 1982.884 kb on + strand, within MPMX20_01890at 1982.884 kb on + strand, within MPMX20_01890at 1982.888 kb on + strand, within MPMX20_01890at 1982.892 kb on - strand, within MPMX20_01890at 1982.916 kb on - strand, within MPMX20_01890at 1982.916 kb on - strand, within MPMX20_01890at 1982.923 kb on - strand, within MPMX20_01890at 1982.926 kb on - strand, within MPMX20_01890at 1982.928 kb on - strand, within MPMX20_01890at 1982.932 kb on + strand, within MPMX20_01890at 1982.950 kb on - strand, within MPMX20_01890at 1983.022 kb on - strand, within MPMX20_01890at 1983.035 kb on + strand, within MPMX20_01890at 1983.035 kb on + strand, within MPMX20_01890at 1983.043 kb on - strand, within MPMX20_01890at 1983.043 kb on - strand, within MPMX20_01890at 1983.077 kb on + strand, within MPMX20_01890at 1983.102 kb on + strandat 1983.110 kb on - strandat 1983.187 kb on - strandat 1983.268 kb on + strandat 1983.282 kb on + strandat 1983.302 kb on + strandat 1983.348 kb on - strand, within MPMX20_01891at 1983.358 kb on - strand, within MPMX20_01891at 1983.425 kb on + strand, within MPMX20_01891at 1983.467 kb on + strand, within MPMX20_01891at 1983.467 kb on + strand, within MPMX20_01891at 1983.467 kb on + strand, within MPMX20_01891at 1983.475 kb on - strand, within MPMX20_01891at 1983.475 kb on - strand, within MPMX20_01891at 1983.545 kb on + strand, within MPMX20_01891at 1983.589 kb on + strand, within MPMX20_01891at 1983.597 kb on - strand, within MPMX20_01891at 1983.599 kb on + strand, within MPMX20_01891at 1983.599 kb on + strand, within MPMX20_01891at 1983.599 kb on + strand, within MPMX20_01891at 1983.599 kb on + strand, within MPMX20_01891at 1983.599 kb on + strand, within MPMX20_01891at 1983.599 kb on + strand, within MPMX20_01891at 1983.607 kb on - strand, within MPMX20_01891at 1983.607 kb on - strand, within MPMX20_01891at 1983.615 kb on + strand, within MPMX20_01891at 1983.633 kb on - strand, within MPMX20_01891at 1983.653 kb on - strand, within MPMX20_01891at 1983.695 kb on - strand, within MPMX20_01891

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,980,872 - MPMX20_01887 0.62 +2.0
1,980,929 - MPMX20_01887 0.70 -0.1
1,980,929 - MPMX20_01887 0.70 +0.0
1,980,976 + MPMX20_01887 0.77 +0.0
1,980,976 + MPMX20_01887 0.77 +0.3
1,980,984 - MPMX20_01887 0.78 -0.0
1,981,015 - MPMX20_01887 0.83 +1.5
1,981,130 - -0.3
1,981,139 + +0.4
1,981,140 + -0.5
1,981,143 + +0.3
1,981,151 + -0.6
1,981,151 + -1.0
1,981,153 + -0.6
1,981,159 - -0.2
1,981,201 + +0.8
1,981,201 + +0.0
1,981,209 - -0.6
1,981,244 + -0.4
1,981,367 - MPMX20_01888 0.17 +0.8
1,981,554 + MPMX20_01888 0.51 -0.0
1,981,583 + MPMX20_01888 0.57 -0.5
1,981,591 - MPMX20_01888 0.58 -0.3
1,981,596 + MPMX20_01888 0.59 -0.3
1,981,630 + MPMX20_01888 0.66 -0.6
1,981,630 - MPMX20_01888 0.66 +0.9
1,981,674 + MPMX20_01888 0.74 -0.4
1,981,674 + MPMX20_01888 0.74 -0.4
1,981,707 + MPMX20_01888 0.80 +2.1
1,981,710 - MPMX20_01888 0.80 +2.4
1,981,816 - +0.2
1,981,849 - +0.3
1,981,898 - -0.3
1,981,923 + -0.8
1,981,923 + +3.8
1,981,923 + +0.7
1,981,923 + -0.6
1,981,933 + +0.4
1,981,933 + +3.6
1,981,933 + -0.2
1,981,941 - MPMX20_01889 0.10 -0.5
1,981,990 + MPMX20_01889 0.16 -0.4
1,981,998 - MPMX20_01889 0.17 +0.0
1,982,065 - MPMX20_01889 0.25 +0.8
1,982,128 - MPMX20_01889 0.32 +1.5
1,982,152 + MPMX20_01889 0.35 -1.0
1,982,161 - MPMX20_01889 0.36 -0.6
1,982,224 + MPMX20_01889 0.43 -0.1
1,982,224 - MPMX20_01889 0.43 -0.5
1,982,224 - MPMX20_01889 0.43 +0.3
1,982,307 - MPMX20_01889 0.53 -0.2
1,982,314 + MPMX20_01889 0.54 -0.6
1,982,314 - MPMX20_01889 0.54 -0.7
1,982,324 - MPMX20_01889 0.55 +0.3
1,982,455 + MPMX20_01889 0.70 -0.1
1,982,472 + MPMX20_01889 0.72 -0.0
1,982,472 + MPMX20_01889 0.72 +0.0
1,982,479 + MPMX20_01889 0.73 -0.0
1,982,479 + MPMX20_01889 0.73 -0.5
1,982,479 + MPMX20_01889 0.73 -0.3
1,982,479 + MPMX20_01889 0.73 +0.2
1,982,480 - MPMX20_01889 0.73 -0.7
1,982,487 - MPMX20_01889 0.74 +1.0
1,982,487 - MPMX20_01889 0.74 -0.4
1,982,487 - MPMX20_01889 0.74 -0.3
1,982,522 + MPMX20_01889 0.78 +0.5
1,982,569 - MPMX20_01889 0.83 +2.6
1,982,673 - +0.6
1,982,675 + -1.5
1,982,691 - -0.2
1,982,786 + -1.3
1,982,788 + -1.9
1,982,788 + +0.7
1,982,788 + -0.4
1,982,794 - -0.3
1,982,794 - -0.2
1,982,796 + -1.5
1,982,796 + +0.1
1,982,884 + MPMX20_01890 0.23 +0.4
1,982,884 + MPMX20_01890 0.23 +0.2
1,982,888 + MPMX20_01890 0.24 +1.2
1,982,892 - MPMX20_01890 0.26 -0.9
1,982,916 - MPMX20_01890 0.34 -0.5
1,982,916 - MPMX20_01890 0.34 -0.3
1,982,923 - MPMX20_01890 0.36 -1.0
1,982,926 - MPMX20_01890 0.37 -0.0
1,982,928 - MPMX20_01890 0.38 -0.3
1,982,932 + MPMX20_01890 0.40 -0.6
1,982,950 - MPMX20_01890 0.46 +2.3
1,983,022 - MPMX20_01890 0.70 +1.5
1,983,035 + MPMX20_01890 0.75 +1.2
1,983,035 + MPMX20_01890 0.75 +1.2
1,983,043 - MPMX20_01890 0.78 +0.3
1,983,043 - MPMX20_01890 0.78 +0.2
1,983,077 + MPMX20_01890 0.89 +3.1
1,983,102 + +0.2
1,983,110 - +0.9
1,983,187 - -0.6
1,983,268 + -1.0
1,983,282 + +1.0
1,983,302 + +0.9
1,983,348 - MPMX20_01891 0.14 -0.1
1,983,358 - MPMX20_01891 0.16 -1.5
1,983,425 + MPMX20_01891 0.23 +1.3
1,983,467 + MPMX20_01891 0.27 -0.2
1,983,467 + MPMX20_01891 0.27 -0.9
1,983,467 + MPMX20_01891 0.27 +0.6
1,983,475 - MPMX20_01891 0.28 -0.0
1,983,475 - MPMX20_01891 0.28 +0.0
1,983,545 + MPMX20_01891 0.36 -0.3
1,983,589 + MPMX20_01891 0.40 +0.7
1,983,597 - MPMX20_01891 0.41 +1.3
1,983,599 + MPMX20_01891 0.41 -0.2
1,983,599 + MPMX20_01891 0.41 +1.1
1,983,599 + MPMX20_01891 0.41 +6.1
1,983,599 + MPMX20_01891 0.41 +1.0
1,983,599 + MPMX20_01891 0.41 +0.2
1,983,599 + MPMX20_01891 0.41 +1.8
1,983,607 - MPMX20_01891 0.42 +0.4
1,983,607 - MPMX20_01891 0.42 -1.0
1,983,615 + MPMX20_01891 0.43 +0.1
1,983,633 - MPMX20_01891 0.45 +0.8
1,983,653 - MPMX20_01891 0.47 +1.0
1,983,695 - MPMX20_01891 0.52 +1.0

Or see this region's nucleotide sequence