Experiment: 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01887 and MPMX20_01888 are separated by 148 nucleotides MPMX20_01888 and MPMX20_01889 are separated by 36 nucleotides MPMX20_01889 and MPMX20_01890 are separated by 105 nucleotides MPMX20_01890 and MPMX20_01891 are separated by 105 nucleotides
MPMX20_01887: MPMX20_01887 - Hexitol phosphatase B, at 1,980,458 to 1,981,129
_01887
MPMX20_01888: MPMX20_01888 - hypothetical protein, at 1,981,278 to 1,981,814
_01888
MPMX20_01889: MPMX20_01889 - putative ketoamine kinase, at 1,981,851 to 1,982,711
_01889
MPMX20_01890: MPMX20_01890 - hypothetical protein, at 1,982,817 to 1,983,107
_01890
MPMX20_01891: MPMX20_01891 - ATP-dependent 6-phosphofructokinase isozyme 2, at 1,983,213 to 1,984,145
_01891
Position (kb)
1981
1982
1983 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 1980.872 kb on - strand, within MPMX20_01887 at 1980.929 kb on - strand, within MPMX20_01887 at 1980.929 kb on - strand, within MPMX20_01887 at 1980.976 kb on + strand, within MPMX20_01887 at 1980.976 kb on + strand, within MPMX20_01887 at 1980.984 kb on - strand, within MPMX20_01887 at 1981.015 kb on - strand, within MPMX20_01887 at 1981.130 kb on - strand at 1981.139 kb on + strand at 1981.140 kb on + strand at 1981.143 kb on + strand at 1981.151 kb on + strand at 1981.151 kb on + strand at 1981.153 kb on + strand at 1981.159 kb on - strand at 1981.201 kb on + strand at 1981.201 kb on + strand at 1981.209 kb on - strand at 1981.244 kb on + strand at 1981.367 kb on - strand, within MPMX20_01888 at 1981.554 kb on + strand, within MPMX20_01888 at 1981.583 kb on + strand, within MPMX20_01888 at 1981.591 kb on - strand, within MPMX20_01888 at 1981.596 kb on + strand, within MPMX20_01888 at 1981.630 kb on + strand, within MPMX20_01888 at 1981.630 kb on - strand, within MPMX20_01888 at 1981.674 kb on + strand, within MPMX20_01888 at 1981.674 kb on + strand, within MPMX20_01888 at 1981.707 kb on + strand, within MPMX20_01888 at 1981.710 kb on - strand, within MPMX20_01888 at 1981.816 kb on - strand at 1981.849 kb on - strand at 1981.898 kb on - strand at 1981.923 kb on + strand at 1981.923 kb on + strand at 1981.923 kb on + strand at 1981.923 kb on + strand at 1981.933 kb on + strand at 1981.933 kb on + strand at 1981.933 kb on + strand at 1981.941 kb on - strand, within MPMX20_01889 at 1981.990 kb on + strand, within MPMX20_01889 at 1981.998 kb on - strand, within MPMX20_01889 at 1982.065 kb on - strand, within MPMX20_01889 at 1982.128 kb on - strand, within MPMX20_01889 at 1982.152 kb on + strand, within MPMX20_01889 at 1982.161 kb on - strand, within MPMX20_01889 at 1982.224 kb on + strand, within MPMX20_01889 at 1982.224 kb on - strand, within MPMX20_01889 at 1982.224 kb on - strand, within MPMX20_01889 at 1982.307 kb on - strand, within MPMX20_01889 at 1982.314 kb on + strand, within MPMX20_01889 at 1982.314 kb on - strand, within MPMX20_01889 at 1982.324 kb on - strand, within MPMX20_01889 at 1982.455 kb on + strand, within MPMX20_01889 at 1982.472 kb on + strand, within MPMX20_01889 at 1982.472 kb on + strand, within MPMX20_01889 at 1982.479 kb on + strand, within MPMX20_01889 at 1982.479 kb on + strand, within MPMX20_01889 at 1982.479 kb on + strand, within MPMX20_01889 at 1982.479 kb on + strand, within MPMX20_01889 at 1982.480 kb on - strand, within MPMX20_01889 at 1982.487 kb on - strand, within MPMX20_01889 at 1982.487 kb on - strand, within MPMX20_01889 at 1982.487 kb on - strand, within MPMX20_01889 at 1982.522 kb on + strand, within MPMX20_01889 at 1982.569 kb on - strand, within MPMX20_01889 at 1982.673 kb on - strand at 1982.675 kb on + strand at 1982.691 kb on - strand at 1982.786 kb on + strand at 1982.788 kb on + strand at 1982.788 kb on + strand at 1982.788 kb on + strand at 1982.794 kb on - strand at 1982.794 kb on - strand at 1982.796 kb on + strand at 1982.796 kb on + strand at 1982.884 kb on + strand, within MPMX20_01890 at 1982.884 kb on + strand, within MPMX20_01890 at 1982.888 kb on + strand, within MPMX20_01890 at 1982.892 kb on - strand, within MPMX20_01890 at 1982.916 kb on - strand, within MPMX20_01890 at 1982.916 kb on - strand, within MPMX20_01890 at 1982.923 kb on - strand, within MPMX20_01890 at 1982.926 kb on - strand, within MPMX20_01890 at 1982.928 kb on - strand, within MPMX20_01890 at 1982.932 kb on + strand, within MPMX20_01890 at 1982.950 kb on - strand, within MPMX20_01890 at 1983.022 kb on - strand, within MPMX20_01890 at 1983.035 kb on + strand, within MPMX20_01890 at 1983.035 kb on + strand, within MPMX20_01890 at 1983.043 kb on - strand, within MPMX20_01890 at 1983.043 kb on - strand, within MPMX20_01890 at 1983.077 kb on + strand, within MPMX20_01890 at 1983.102 kb on + strand at 1983.110 kb on - strand at 1983.187 kb on - strand at 1983.268 kb on + strand at 1983.282 kb on + strand at 1983.302 kb on + strand at 1983.348 kb on - strand, within MPMX20_01891 at 1983.358 kb on - strand, within MPMX20_01891 at 1983.425 kb on + strand, within MPMX20_01891 at 1983.467 kb on + strand, within MPMX20_01891 at 1983.467 kb on + strand, within MPMX20_01891 at 1983.467 kb on + strand, within MPMX20_01891 at 1983.475 kb on - strand, within MPMX20_01891 at 1983.475 kb on - strand, within MPMX20_01891 at 1983.545 kb on + strand, within MPMX20_01891 at 1983.589 kb on + strand, within MPMX20_01891 at 1983.597 kb on - strand, within MPMX20_01891 at 1983.599 kb on + strand, within MPMX20_01891 at 1983.599 kb on + strand, within MPMX20_01891 at 1983.599 kb on + strand, within MPMX20_01891 at 1983.599 kb on + strand, within MPMX20_01891 at 1983.599 kb on + strand, within MPMX20_01891 at 1983.599 kb on + strand, within MPMX20_01891 at 1983.607 kb on - strand, within MPMX20_01891 at 1983.607 kb on - strand, within MPMX20_01891 at 1983.615 kb on + strand, within MPMX20_01891 at 1983.633 kb on - strand, within MPMX20_01891 at 1983.653 kb on - strand, within MPMX20_01891 at 1983.695 kb on - strand, within MPMX20_01891
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,980,872 - MPMX20_01887 0.62 +2.0 1,980,929 - MPMX20_01887 0.70 -0.1 1,980,929 - MPMX20_01887 0.70 +0.0 1,980,976 + MPMX20_01887 0.77 +0.0 1,980,976 + MPMX20_01887 0.77 +0.3 1,980,984 - MPMX20_01887 0.78 -0.0 1,981,015 - MPMX20_01887 0.83 +1.5 1,981,130 - -0.3 1,981,139 + +0.4 1,981,140 + -0.5 1,981,143 + +0.3 1,981,151 + -0.6 1,981,151 + -1.0 1,981,153 + -0.6 1,981,159 - -0.2 1,981,201 + +0.8 1,981,201 + +0.0 1,981,209 - -0.6 1,981,244 + -0.4 1,981,367 - MPMX20_01888 0.17 +0.8 1,981,554 + MPMX20_01888 0.51 -0.0 1,981,583 + MPMX20_01888 0.57 -0.5 1,981,591 - MPMX20_01888 0.58 -0.3 1,981,596 + MPMX20_01888 0.59 -0.3 1,981,630 + MPMX20_01888 0.66 -0.6 1,981,630 - MPMX20_01888 0.66 +0.9 1,981,674 + MPMX20_01888 0.74 -0.4 1,981,674 + MPMX20_01888 0.74 -0.4 1,981,707 + MPMX20_01888 0.80 +2.1 1,981,710 - MPMX20_01888 0.80 +2.4 1,981,816 - +0.2 1,981,849 - +0.3 1,981,898 - -0.3 1,981,923 + -0.8 1,981,923 + +3.8 1,981,923 + +0.7 1,981,923 + -0.6 1,981,933 + +0.4 1,981,933 + +3.6 1,981,933 + -0.2 1,981,941 - MPMX20_01889 0.10 -0.5 1,981,990 + MPMX20_01889 0.16 -0.4 1,981,998 - MPMX20_01889 0.17 +0.0 1,982,065 - MPMX20_01889 0.25 +0.8 1,982,128 - MPMX20_01889 0.32 +1.5 1,982,152 + MPMX20_01889 0.35 -1.0 1,982,161 - MPMX20_01889 0.36 -0.6 1,982,224 + MPMX20_01889 0.43 -0.1 1,982,224 - MPMX20_01889 0.43 -0.5 1,982,224 - MPMX20_01889 0.43 +0.3 1,982,307 - MPMX20_01889 0.53 -0.2 1,982,314 + MPMX20_01889 0.54 -0.6 1,982,314 - MPMX20_01889 0.54 -0.7 1,982,324 - MPMX20_01889 0.55 +0.3 1,982,455 + MPMX20_01889 0.70 -0.1 1,982,472 + MPMX20_01889 0.72 -0.0 1,982,472 + MPMX20_01889 0.72 +0.0 1,982,479 + MPMX20_01889 0.73 -0.0 1,982,479 + MPMX20_01889 0.73 -0.5 1,982,479 + MPMX20_01889 0.73 -0.3 1,982,479 + MPMX20_01889 0.73 +0.2 1,982,480 - MPMX20_01889 0.73 -0.7 1,982,487 - MPMX20_01889 0.74 +1.0 1,982,487 - MPMX20_01889 0.74 -0.4 1,982,487 - MPMX20_01889 0.74 -0.3 1,982,522 + MPMX20_01889 0.78 +0.5 1,982,569 - MPMX20_01889 0.83 +2.6 1,982,673 - +0.6 1,982,675 + -1.5 1,982,691 - -0.2 1,982,786 + -1.3 1,982,788 + -1.9 1,982,788 + +0.7 1,982,788 + -0.4 1,982,794 - -0.3 1,982,794 - -0.2 1,982,796 + -1.5 1,982,796 + +0.1 1,982,884 + MPMX20_01890 0.23 +0.4 1,982,884 + MPMX20_01890 0.23 +0.2 1,982,888 + MPMX20_01890 0.24 +1.2 1,982,892 - MPMX20_01890 0.26 -0.9 1,982,916 - MPMX20_01890 0.34 -0.5 1,982,916 - MPMX20_01890 0.34 -0.3 1,982,923 - MPMX20_01890 0.36 -1.0 1,982,926 - MPMX20_01890 0.37 -0.0 1,982,928 - MPMX20_01890 0.38 -0.3 1,982,932 + MPMX20_01890 0.40 -0.6 1,982,950 - MPMX20_01890 0.46 +2.3 1,983,022 - MPMX20_01890 0.70 +1.5 1,983,035 + MPMX20_01890 0.75 +1.2 1,983,035 + MPMX20_01890 0.75 +1.2 1,983,043 - MPMX20_01890 0.78 +0.3 1,983,043 - MPMX20_01890 0.78 +0.2 1,983,077 + MPMX20_01890 0.89 +3.1 1,983,102 + +0.2 1,983,110 - +0.9 1,983,187 - -0.6 1,983,268 + -1.0 1,983,282 + +1.0 1,983,302 + +0.9 1,983,348 - MPMX20_01891 0.14 -0.1 1,983,358 - MPMX20_01891 0.16 -1.5 1,983,425 + MPMX20_01891 0.23 +1.3 1,983,467 + MPMX20_01891 0.27 -0.2 1,983,467 + MPMX20_01891 0.27 -0.9 1,983,467 + MPMX20_01891 0.27 +0.6 1,983,475 - MPMX20_01891 0.28 -0.0 1,983,475 - MPMX20_01891 0.28 +0.0 1,983,545 + MPMX20_01891 0.36 -0.3 1,983,589 + MPMX20_01891 0.40 +0.7 1,983,597 - MPMX20_01891 0.41 +1.3 1,983,599 + MPMX20_01891 0.41 -0.2 1,983,599 + MPMX20_01891 0.41 +1.1 1,983,599 + MPMX20_01891 0.41 +6.1 1,983,599 + MPMX20_01891 0.41 +1.0 1,983,599 + MPMX20_01891 0.41 +0.2 1,983,599 + MPMX20_01891 0.41 +1.8 1,983,607 - MPMX20_01891 0.42 +0.4 1,983,607 - MPMX20_01891 0.42 -1.0 1,983,615 + MPMX20_01891 0.43 +0.1 1,983,633 - MPMX20_01891 0.45 +0.8 1,983,653 - MPMX20_01891 0.47 +1.0 1,983,695 - MPMX20_01891 0.52 +1.0
Or see this region's nucleotide sequence