Experiment: 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01072 and MPMX20_01073 are separated by 54 nucleotides MPMX20_01073 and MPMX20_01074 overlap by 1 nucleotides MPMX20_01074 and MPMX20_01075 are separated by 110 nucleotides
MPMX20_01072: MPMX20_01072 - DNA polymerase III subunit tau, at 1,128,823 to 1,130,751
_01072
MPMX20_01073: MPMX20_01073 - Nucleoid-associated protein YbaB, at 1,130,806 to 1,131,138
_01073
MPMX20_01074: MPMX20_01074 - Recombination protein RecR, at 1,131,138 to 1,131,743
_01074
MPMX20_01075: MPMX20_01075 - Chaperone protein HtpG, at 1,131,854 to 1,133,728
_01075
Position (kb)
1130
1131
1132 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1130.770 kb on - strand at 1130.792 kb on + strand at 1130.810 kb on - strand at 1130.921 kb on + strand, within MPMX20_01073 at 1130.931 kb on + strand, within MPMX20_01073 at 1130.931 kb on + strand, within MPMX20_01073 at 1130.981 kb on + strand, within MPMX20_01073 at 1131.126 kb on - strand at 1131.151 kb on - strand at 1131.153 kb on - strand at 1131.198 kb on + strand at 1131.281 kb on - strand, within MPMX20_01074 at 1131.341 kb on + strand, within MPMX20_01074 at 1131.347 kb on + strand, within MPMX20_01074 at 1131.347 kb on + strand, within MPMX20_01074 at 1131.357 kb on + strand, within MPMX20_01074 at 1131.383 kb on + strand, within MPMX20_01074 at 1131.401 kb on - strand, within MPMX20_01074 at 1131.451 kb on + strand, within MPMX20_01074 at 1131.487 kb on + strand, within MPMX20_01074 at 1131.487 kb on + strand, within MPMX20_01074 at 1131.487 kb on + strand, within MPMX20_01074 at 1131.517 kb on + strand, within MPMX20_01074 at 1131.517 kb on + strand, within MPMX20_01074 at 1131.517 kb on + strand, within MPMX20_01074 at 1131.517 kb on + strand, within MPMX20_01074 at 1131.525 kb on - strand, within MPMX20_01074 at 1131.631 kb on + strand, within MPMX20_01074 at 1131.694 kb on + strand at 1131.704 kb on + strand at 1131.704 kb on + strand at 1131.853 kb on + strand at 1131.996 kb on + strand at 1132.006 kb on + strand at 1132.032 kb on + strand at 1132.040 kb on - strand at 1132.045 kb on - strand, within MPMX20_01075 at 1132.103 kb on + strand, within MPMX20_01075 at 1132.103 kb on + strand, within MPMX20_01075 at 1132.111 kb on - strand, within MPMX20_01075
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,130,770 - -0.6 1,130,792 + +0.4 1,130,810 - -0.6 1,130,921 + MPMX20_01073 0.35 -1.4 1,130,931 + MPMX20_01073 0.38 -2.3 1,130,931 + MPMX20_01073 0.38 -4.5 1,130,981 + MPMX20_01073 0.53 -1.0 1,131,126 - +0.5 1,131,151 - -1.8 1,131,153 - -1.4 1,131,198 + -1.1 1,131,281 - MPMX20_01074 0.24 +1.3 1,131,341 + MPMX20_01074 0.33 -1.5 1,131,347 + MPMX20_01074 0.34 +1.0 1,131,347 + MPMX20_01074 0.34 -0.8 1,131,357 + MPMX20_01074 0.36 -0.6 1,131,383 + MPMX20_01074 0.40 -0.9 1,131,401 - MPMX20_01074 0.43 -0.8 1,131,451 + MPMX20_01074 0.52 -1.5 1,131,487 + MPMX20_01074 0.58 +0.9 1,131,487 + MPMX20_01074 0.58 +0.0 1,131,487 + MPMX20_01074 0.58 +0.2 1,131,517 + MPMX20_01074 0.63 +0.1 1,131,517 + MPMX20_01074 0.63 -0.3 1,131,517 + MPMX20_01074 0.63 -0.1 1,131,517 + MPMX20_01074 0.63 +1.2 1,131,525 - MPMX20_01074 0.64 -0.6 1,131,631 + MPMX20_01074 0.81 -0.7 1,131,694 + -0.8 1,131,704 + -1.1 1,131,704 + -0.5 1,131,853 + -0.5 1,131,996 + -0.3 1,132,006 + -0.0 1,132,032 + +0.8 1,132,040 - +0.4 1,132,045 - MPMX20_01075 0.10 -0.2 1,132,103 + MPMX20_01075 0.13 +0.8 1,132,103 + MPMX20_01075 0.13 +0.7 1,132,111 - MPMX20_01075 0.14 +0.8
Or see this region's nucleotide sequence