Experiment: 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01038 and MPMX20_01039 are separated by 115 nucleotides MPMX20_01039 and MPMX20_01040 are separated by 50 nucleotides MPMX20_01040 and MPMX20_01041 overlap by 8 nucleotides
MPMX20_01038: MPMX20_01038 - N-(2-amino-2-carboxyethyl)-L-glutamate synthase, at 1,093,457 to 1,094,503
_01038
MPMX20_01039: MPMX20_01039 - DNA-binding transcriptional activator DecR, at 1,094,619 to 1,095,077
_01039
MPMX20_01040: MPMX20_01040 - putative multidrug resistance ABC transporter ATP-binding/permease protein YheI, at 1,095,128 to 1,096,900
_01040
MPMX20_01041: MPMX20_01041 - Multidrug resistance-like ATP-binding protein MdlB, at 1,096,893 to 1,098,674
_01041
Position (kb)
1095
1096
1097 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8
9
10 at 1094.187 kb on + strand, within MPMX20_01038 at 1094.187 kb on + strand, within MPMX20_01038 at 1094.293 kb on + strand, within MPMX20_01038 at 1094.301 kb on - strand, within MPMX20_01038 at 1094.301 kb on - strand, within MPMX20_01038 at 1094.301 kb on - strand, within MPMX20_01038 at 1094.301 kb on - strand, within MPMX20_01038 at 1094.355 kb on - strand, within MPMX20_01038 at 1094.392 kb on + strand, within MPMX20_01038 at 1094.482 kb on + strand at 1094.482 kb on + strand at 1094.482 kb on + strand at 1094.482 kb on + strand at 1094.482 kb on + strand at 1094.482 kb on + strand at 1094.490 kb on - strand at 1094.698 kb on + strand, within MPMX20_01039 at 1094.698 kb on + strand, within MPMX20_01039 at 1094.760 kb on + strand, within MPMX20_01039 at 1094.869 kb on + strand, within MPMX20_01039 at 1094.895 kb on - strand, within MPMX20_01039 at 1094.922 kb on + strand, within MPMX20_01039 at 1094.922 kb on + strand, within MPMX20_01039 at 1094.922 kb on + strand, within MPMX20_01039 at 1094.965 kb on - strand, within MPMX20_01039 at 1094.996 kb on + strand, within MPMX20_01039 at 1094.998 kb on - strand, within MPMX20_01039 at 1095.010 kb on + strand, within MPMX20_01039 at 1095.030 kb on - strand, within MPMX20_01039 at 1095.044 kb on + strand at 1095.053 kb on - strand at 1095.055 kb on + strand at 1095.055 kb on + strand at 1095.055 kb on + strand at 1095.068 kb on - strand at 1095.111 kb on - strand at 1095.124 kb on - strand at 1095.197 kb on - strand at 1095.254 kb on - strand at 1095.269 kb on - strand at 1095.280 kb on - strand at 1095.282 kb on - strand at 1095.282 kb on - strand at 1095.298 kb on + strand at 1095.317 kb on - strand, within MPMX20_01040 at 1095.346 kb on + strand, within MPMX20_01040 at 1095.357 kb on + strand, within MPMX20_01040 at 1095.362 kb on + strand, within MPMX20_01040 at 1095.549 kb on - strand, within MPMX20_01040 at 1095.554 kb on + strand, within MPMX20_01040 at 1095.562 kb on - strand, within MPMX20_01040 at 1095.733 kb on + strand, within MPMX20_01040 at 1095.793 kb on + strand, within MPMX20_01040 at 1095.801 kb on - strand, within MPMX20_01040 at 1095.801 kb on - strand, within MPMX20_01040 at 1095.801 kb on - strand, within MPMX20_01040 at 1095.929 kb on + strand, within MPMX20_01040 at 1095.934 kb on + strand, within MPMX20_01040 at 1095.963 kb on + strand, within MPMX20_01040 at 1095.975 kb on + strand, within MPMX20_01040 at 1095.983 kb on - strand, within MPMX20_01040 at 1096.017 kb on - strand, within MPMX20_01040 at 1096.080 kb on + strand, within MPMX20_01040 at 1096.178 kb on + strand, within MPMX20_01040 at 1096.178 kb on + strand, within MPMX20_01040 at 1096.184 kb on - strand, within MPMX20_01040 at 1096.186 kb on - strand, within MPMX20_01040 at 1096.186 kb on - strand, within MPMX20_01040 at 1096.186 kb on - strand, within MPMX20_01040 at 1096.290 kb on - strand, within MPMX20_01040 at 1096.426 kb on - strand, within MPMX20_01040 at 1096.451 kb on + strand, within MPMX20_01040 at 1096.457 kb on - strand, within MPMX20_01040 at 1096.466 kb on + strand, within MPMX20_01040 at 1096.466 kb on + strand, within MPMX20_01040 at 1096.536 kb on + strand, within MPMX20_01040 at 1096.544 kb on - strand, within MPMX20_01040 at 1096.544 kb on - strand, within MPMX20_01040 at 1096.605 kb on + strand, within MPMX20_01040 at 1096.634 kb on + strand, within MPMX20_01040 at 1096.676 kb on - strand, within MPMX20_01040 at 1096.712 kb on + strand, within MPMX20_01040 at 1096.775 kb on - strand at 1096.833 kb on + strand at 1096.841 kb on - strand at 1096.843 kb on + strand at 1096.858 kb on + strand at 1096.876 kb on + strand at 1096.883 kb on - strand at 1096.895 kb on + strand at 1096.945 kb on + strand at 1096.948 kb on - strand at 1096.985 kb on - strand at 1097.017 kb on + strand at 1097.017 kb on - strand at 1097.025 kb on - strand at 1097.088 kb on + strand, within MPMX20_01041 at 1097.089 kb on + strand, within MPMX20_01041 at 1097.097 kb on - strand, within MPMX20_01041 at 1097.097 kb on - strand, within MPMX20_01041 at 1097.110 kb on + strand, within MPMX20_01041 at 1097.113 kb on - strand, within MPMX20_01041 at 1097.118 kb on - strand, within MPMX20_01041 at 1097.135 kb on + strand, within MPMX20_01041 at 1097.179 kb on - strand, within MPMX20_01041 at 1097.189 kb on - strand, within MPMX20_01041 at 1097.338 kb on + strand, within MPMX20_01041 at 1097.348 kb on + strand, within MPMX20_01041 at 1097.351 kb on - strand, within MPMX20_01041 at 1097.422 kb on - strand, within MPMX20_01041 at 1097.469 kb on - strand, within MPMX20_01041 at 1097.520 kb on + strand, within MPMX20_01041 at 1097.587 kb on - strand, within MPMX20_01041 at 1097.640 kb on + strand, within MPMX20_01041 at 1097.792 kb on + strand, within MPMX20_01041 at 1097.797 kb on + strand, within MPMX20_01041 at 1097.799 kb on + strand, within MPMX20_01041 at 1097.868 kb on + strand, within MPMX20_01041 at 1097.868 kb on + strand, within MPMX20_01041 at 1097.876 kb on - strand, within MPMX20_01041 at 1097.889 kb on - strand, within MPMX20_01041
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,094,187 + MPMX20_01038 0.70 +3.2 1,094,187 + MPMX20_01038 0.70 +0.1 1,094,293 + MPMX20_01038 0.80 -0.7 1,094,301 - MPMX20_01038 0.81 -0.3 1,094,301 - MPMX20_01038 0.81 -0.6 1,094,301 - MPMX20_01038 0.81 -0.6 1,094,301 - MPMX20_01038 0.81 +0.1 1,094,355 - MPMX20_01038 0.86 -1.0 1,094,392 + MPMX20_01038 0.89 -0.9 1,094,482 + -1.4 1,094,482 + +0.7 1,094,482 + +0.3 1,094,482 + +0.6 1,094,482 + -0.6 1,094,482 + +0.8 1,094,490 - -0.6 1,094,698 + MPMX20_01039 0.17 -1.0 1,094,698 + MPMX20_01039 0.17 +0.2 1,094,760 + MPMX20_01039 0.31 +0.1 1,094,869 + MPMX20_01039 0.54 -1.0 1,094,895 - MPMX20_01039 0.60 -0.2 1,094,922 + MPMX20_01039 0.66 -3.6 1,094,922 + MPMX20_01039 0.66 +2.0 1,094,922 + MPMX20_01039 0.66 -1.5 1,094,965 - MPMX20_01039 0.75 +0.6 1,094,996 + MPMX20_01039 0.82 -0.8 1,094,998 - MPMX20_01039 0.83 +0.7 1,095,010 + MPMX20_01039 0.85 -0.5 1,095,030 - MPMX20_01039 0.90 +0.1 1,095,044 + -1.3 1,095,053 - +0.0 1,095,055 + -1.1 1,095,055 + -0.4 1,095,055 + -1.3 1,095,068 - +3.8 1,095,111 - +1.0 1,095,124 - +1.0 1,095,197 - -0.0 1,095,254 - +1.0 1,095,269 - -2.8 1,095,280 - -0.0 1,095,282 - -1.0 1,095,282 - -0.3 1,095,298 + -2.4 1,095,317 - MPMX20_01040 0.11 +0.0 1,095,346 + MPMX20_01040 0.12 +1.4 1,095,357 + MPMX20_01040 0.13 -0.8 1,095,362 + MPMX20_01040 0.13 -0.3 1,095,549 - MPMX20_01040 0.24 -0.8 1,095,554 + MPMX20_01040 0.24 +0.5 1,095,562 - MPMX20_01040 0.24 +0.4 1,095,733 + MPMX20_01040 0.34 -1.5 1,095,793 + MPMX20_01040 0.38 -2.0 1,095,801 - MPMX20_01040 0.38 -0.4 1,095,801 - MPMX20_01040 0.38 -0.6 1,095,801 - MPMX20_01040 0.38 +2.3 1,095,929 + MPMX20_01040 0.45 -1.4 1,095,934 + MPMX20_01040 0.45 +4.6 1,095,963 + MPMX20_01040 0.47 +2.0 1,095,975 + MPMX20_01040 0.48 -0.6 1,095,983 - MPMX20_01040 0.48 -0.2 1,096,017 - MPMX20_01040 0.50 +0.4 1,096,080 + MPMX20_01040 0.54 -0.5 1,096,178 + MPMX20_01040 0.59 +0.2 1,096,178 + MPMX20_01040 0.59 -1.9 1,096,184 - MPMX20_01040 0.60 -1.4 1,096,186 - MPMX20_01040 0.60 -0.6 1,096,186 - MPMX20_01040 0.60 +0.1 1,096,186 - MPMX20_01040 0.60 -0.0 1,096,290 - MPMX20_01040 0.66 -0.4 1,096,426 - MPMX20_01040 0.73 +0.1 1,096,451 + MPMX20_01040 0.75 +1.0 1,096,457 - MPMX20_01040 0.75 -0.7 1,096,466 + MPMX20_01040 0.75 -0.5 1,096,466 + MPMX20_01040 0.75 +0.7 1,096,536 + MPMX20_01040 0.79 +9.9 1,096,544 - MPMX20_01040 0.80 +2.0 1,096,544 - MPMX20_01040 0.80 -1.1 1,096,605 + MPMX20_01040 0.83 +0.6 1,096,634 + MPMX20_01040 0.85 +0.4 1,096,676 - MPMX20_01040 0.87 -0.5 1,096,712 + MPMX20_01040 0.89 -0.5 1,096,775 - +0.2 1,096,833 + -1.6 1,096,841 - -0.3 1,096,843 + +0.1 1,096,858 + -0.1 1,096,876 + -0.0 1,096,883 - -1.0 1,096,895 + -0.2 1,096,945 + -0.9 1,096,948 - +0.2 1,096,985 - -0.4 1,097,017 + +2.9 1,097,017 - -0.6 1,097,025 - +0.5 1,097,088 + MPMX20_01041 0.11 -0.0 1,097,089 + MPMX20_01041 0.11 +0.3 1,097,097 - MPMX20_01041 0.11 -0.3 1,097,097 - MPMX20_01041 0.11 -1.4 1,097,110 + MPMX20_01041 0.12 +0.1 1,097,113 - MPMX20_01041 0.12 -1.0 1,097,118 - MPMX20_01041 0.13 -0.5 1,097,135 + MPMX20_01041 0.14 +0.1 1,097,179 - MPMX20_01041 0.16 -1.4 1,097,189 - MPMX20_01041 0.17 -1.0 1,097,338 + MPMX20_01041 0.25 -0.0 1,097,348 + MPMX20_01041 0.26 -1.1 1,097,351 - MPMX20_01041 0.26 -1.0 1,097,422 - MPMX20_01041 0.30 -1.2 1,097,469 - MPMX20_01041 0.32 +0.3 1,097,520 + MPMX20_01041 0.35 -0.4 1,097,587 - MPMX20_01041 0.39 +0.0 1,097,640 + MPMX20_01041 0.42 +1.1 1,097,792 + MPMX20_01041 0.50 +1.6 1,097,797 + MPMX20_01041 0.51 +0.2 1,097,799 + MPMX20_01041 0.51 +0.7 1,097,868 + MPMX20_01041 0.55 +0.5 1,097,868 + MPMX20_01041 0.55 +0.3 1,097,876 - MPMX20_01041 0.55 -0.5 1,097,889 - MPMX20_01041 0.56 -0.6
Or see this region's nucleotide sequence