Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01040

Experiment: 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01038 and MPMX20_01039 are separated by 115 nucleotidesMPMX20_01039 and MPMX20_01040 are separated by 50 nucleotidesMPMX20_01040 and MPMX20_01041 overlap by 8 nucleotides MPMX20_01038: MPMX20_01038 - N-(2-amino-2-carboxyethyl)-L-glutamate synthase, at 1,093,457 to 1,094,503 _01038 MPMX20_01039: MPMX20_01039 - DNA-binding transcriptional activator DecR, at 1,094,619 to 1,095,077 _01039 MPMX20_01040: MPMX20_01040 - putative multidrug resistance ABC transporter ATP-binding/permease protein YheI, at 1,095,128 to 1,096,900 _01040 MPMX20_01041: MPMX20_01041 - Multidrug resistance-like ATP-binding protein MdlB, at 1,096,893 to 1,098,674 _01041 Position (kb) 1095 1096 1097Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10at 1094.187 kb on + strand, within MPMX20_01038at 1094.187 kb on + strand, within MPMX20_01038at 1094.293 kb on + strand, within MPMX20_01038at 1094.301 kb on - strand, within MPMX20_01038at 1094.301 kb on - strand, within MPMX20_01038at 1094.301 kb on - strand, within MPMX20_01038at 1094.301 kb on - strand, within MPMX20_01038at 1094.355 kb on - strand, within MPMX20_01038at 1094.392 kb on + strand, within MPMX20_01038at 1094.482 kb on + strandat 1094.482 kb on + strandat 1094.482 kb on + strandat 1094.482 kb on + strandat 1094.482 kb on + strandat 1094.482 kb on + strandat 1094.490 kb on - strandat 1094.698 kb on + strand, within MPMX20_01039at 1094.698 kb on + strand, within MPMX20_01039at 1094.760 kb on + strand, within MPMX20_01039at 1094.869 kb on + strand, within MPMX20_01039at 1094.895 kb on - strand, within MPMX20_01039at 1094.922 kb on + strand, within MPMX20_01039at 1094.922 kb on + strand, within MPMX20_01039at 1094.922 kb on + strand, within MPMX20_01039at 1094.965 kb on - strand, within MPMX20_01039at 1094.996 kb on + strand, within MPMX20_01039at 1094.998 kb on - strand, within MPMX20_01039at 1095.010 kb on + strand, within MPMX20_01039at 1095.030 kb on - strand, within MPMX20_01039at 1095.044 kb on + strandat 1095.053 kb on - strandat 1095.055 kb on + strandat 1095.055 kb on + strandat 1095.055 kb on + strandat 1095.068 kb on - strandat 1095.111 kb on - strandat 1095.124 kb on - strandat 1095.197 kb on - strandat 1095.254 kb on - strandat 1095.269 kb on - strandat 1095.280 kb on - strandat 1095.282 kb on - strandat 1095.282 kb on - strandat 1095.298 kb on + strandat 1095.317 kb on - strand, within MPMX20_01040at 1095.346 kb on + strand, within MPMX20_01040at 1095.357 kb on + strand, within MPMX20_01040at 1095.362 kb on + strand, within MPMX20_01040at 1095.549 kb on - strand, within MPMX20_01040at 1095.554 kb on + strand, within MPMX20_01040at 1095.562 kb on - strand, within MPMX20_01040at 1095.733 kb on + strand, within MPMX20_01040at 1095.793 kb on + strand, within MPMX20_01040at 1095.801 kb on - strand, within MPMX20_01040at 1095.801 kb on - strand, within MPMX20_01040at 1095.801 kb on - strand, within MPMX20_01040at 1095.929 kb on + strand, within MPMX20_01040at 1095.934 kb on + strand, within MPMX20_01040at 1095.963 kb on + strand, within MPMX20_01040at 1095.975 kb on + strand, within MPMX20_01040at 1095.983 kb on - strand, within MPMX20_01040at 1096.017 kb on - strand, within MPMX20_01040at 1096.080 kb on + strand, within MPMX20_01040at 1096.178 kb on + strand, within MPMX20_01040at 1096.178 kb on + strand, within MPMX20_01040at 1096.184 kb on - strand, within MPMX20_01040at 1096.186 kb on - strand, within MPMX20_01040at 1096.186 kb on - strand, within MPMX20_01040at 1096.186 kb on - strand, within MPMX20_01040at 1096.290 kb on - strand, within MPMX20_01040at 1096.426 kb on - strand, within MPMX20_01040at 1096.451 kb on + strand, within MPMX20_01040at 1096.457 kb on - strand, within MPMX20_01040at 1096.466 kb on + strand, within MPMX20_01040at 1096.466 kb on + strand, within MPMX20_01040at 1096.536 kb on + strand, within MPMX20_01040at 1096.544 kb on - strand, within MPMX20_01040at 1096.544 kb on - strand, within MPMX20_01040at 1096.605 kb on + strand, within MPMX20_01040at 1096.634 kb on + strand, within MPMX20_01040at 1096.676 kb on - strand, within MPMX20_01040at 1096.712 kb on + strand, within MPMX20_01040at 1096.775 kb on - strandat 1096.833 kb on + strandat 1096.841 kb on - strandat 1096.843 kb on + strandat 1096.858 kb on + strandat 1096.876 kb on + strandat 1096.883 kb on - strandat 1096.895 kb on + strandat 1096.945 kb on + strandat 1096.948 kb on - strandat 1096.985 kb on - strandat 1097.017 kb on + strandat 1097.017 kb on - strandat 1097.025 kb on - strandat 1097.088 kb on + strand, within MPMX20_01041at 1097.089 kb on + strand, within MPMX20_01041at 1097.097 kb on - strand, within MPMX20_01041at 1097.097 kb on - strand, within MPMX20_01041at 1097.110 kb on + strand, within MPMX20_01041at 1097.113 kb on - strand, within MPMX20_01041at 1097.118 kb on - strand, within MPMX20_01041at 1097.135 kb on + strand, within MPMX20_01041at 1097.179 kb on - strand, within MPMX20_01041at 1097.189 kb on - strand, within MPMX20_01041at 1097.338 kb on + strand, within MPMX20_01041at 1097.348 kb on + strand, within MPMX20_01041at 1097.351 kb on - strand, within MPMX20_01041at 1097.422 kb on - strand, within MPMX20_01041at 1097.469 kb on - strand, within MPMX20_01041at 1097.520 kb on + strand, within MPMX20_01041at 1097.587 kb on - strand, within MPMX20_01041at 1097.640 kb on + strand, within MPMX20_01041at 1097.792 kb on + strand, within MPMX20_01041at 1097.797 kb on + strand, within MPMX20_01041at 1097.799 kb on + strand, within MPMX20_01041at 1097.868 kb on + strand, within MPMX20_01041at 1097.868 kb on + strand, within MPMX20_01041at 1097.876 kb on - strand, within MPMX20_01041at 1097.889 kb on - strand, within MPMX20_01041

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,094,187 + MPMX20_01038 0.70 +3.2
1,094,187 + MPMX20_01038 0.70 +0.1
1,094,293 + MPMX20_01038 0.80 -0.7
1,094,301 - MPMX20_01038 0.81 -0.3
1,094,301 - MPMX20_01038 0.81 -0.6
1,094,301 - MPMX20_01038 0.81 -0.6
1,094,301 - MPMX20_01038 0.81 +0.1
1,094,355 - MPMX20_01038 0.86 -1.0
1,094,392 + MPMX20_01038 0.89 -0.9
1,094,482 + -1.4
1,094,482 + +0.7
1,094,482 + +0.3
1,094,482 + +0.6
1,094,482 + -0.6
1,094,482 + +0.8
1,094,490 - -0.6
1,094,698 + MPMX20_01039 0.17 -1.0
1,094,698 + MPMX20_01039 0.17 +0.2
1,094,760 + MPMX20_01039 0.31 +0.1
1,094,869 + MPMX20_01039 0.54 -1.0
1,094,895 - MPMX20_01039 0.60 -0.2
1,094,922 + MPMX20_01039 0.66 -3.6
1,094,922 + MPMX20_01039 0.66 +2.0
1,094,922 + MPMX20_01039 0.66 -1.5
1,094,965 - MPMX20_01039 0.75 +0.6
1,094,996 + MPMX20_01039 0.82 -0.8
1,094,998 - MPMX20_01039 0.83 +0.7
1,095,010 + MPMX20_01039 0.85 -0.5
1,095,030 - MPMX20_01039 0.90 +0.1
1,095,044 + -1.3
1,095,053 - +0.0
1,095,055 + -1.1
1,095,055 + -0.4
1,095,055 + -1.3
1,095,068 - +3.8
1,095,111 - +1.0
1,095,124 - +1.0
1,095,197 - -0.0
1,095,254 - +1.0
1,095,269 - -2.8
1,095,280 - -0.0
1,095,282 - -1.0
1,095,282 - -0.3
1,095,298 + -2.4
1,095,317 - MPMX20_01040 0.11 +0.0
1,095,346 + MPMX20_01040 0.12 +1.4
1,095,357 + MPMX20_01040 0.13 -0.8
1,095,362 + MPMX20_01040 0.13 -0.3
1,095,549 - MPMX20_01040 0.24 -0.8
1,095,554 + MPMX20_01040 0.24 +0.5
1,095,562 - MPMX20_01040 0.24 +0.4
1,095,733 + MPMX20_01040 0.34 -1.5
1,095,793 + MPMX20_01040 0.38 -2.0
1,095,801 - MPMX20_01040 0.38 -0.4
1,095,801 - MPMX20_01040 0.38 -0.6
1,095,801 - MPMX20_01040 0.38 +2.3
1,095,929 + MPMX20_01040 0.45 -1.4
1,095,934 + MPMX20_01040 0.45 +4.6
1,095,963 + MPMX20_01040 0.47 +2.0
1,095,975 + MPMX20_01040 0.48 -0.6
1,095,983 - MPMX20_01040 0.48 -0.2
1,096,017 - MPMX20_01040 0.50 +0.4
1,096,080 + MPMX20_01040 0.54 -0.5
1,096,178 + MPMX20_01040 0.59 +0.2
1,096,178 + MPMX20_01040 0.59 -1.9
1,096,184 - MPMX20_01040 0.60 -1.4
1,096,186 - MPMX20_01040 0.60 -0.6
1,096,186 - MPMX20_01040 0.60 +0.1
1,096,186 - MPMX20_01040 0.60 -0.0
1,096,290 - MPMX20_01040 0.66 -0.4
1,096,426 - MPMX20_01040 0.73 +0.1
1,096,451 + MPMX20_01040 0.75 +1.0
1,096,457 - MPMX20_01040 0.75 -0.7
1,096,466 + MPMX20_01040 0.75 -0.5
1,096,466 + MPMX20_01040 0.75 +0.7
1,096,536 + MPMX20_01040 0.79 +9.9
1,096,544 - MPMX20_01040 0.80 +2.0
1,096,544 - MPMX20_01040 0.80 -1.1
1,096,605 + MPMX20_01040 0.83 +0.6
1,096,634 + MPMX20_01040 0.85 +0.4
1,096,676 - MPMX20_01040 0.87 -0.5
1,096,712 + MPMX20_01040 0.89 -0.5
1,096,775 - +0.2
1,096,833 + -1.6
1,096,841 - -0.3
1,096,843 + +0.1
1,096,858 + -0.1
1,096,876 + -0.0
1,096,883 - -1.0
1,096,895 + -0.2
1,096,945 + -0.9
1,096,948 - +0.2
1,096,985 - -0.4
1,097,017 + +2.9
1,097,017 - -0.6
1,097,025 - +0.5
1,097,088 + MPMX20_01041 0.11 -0.0
1,097,089 + MPMX20_01041 0.11 +0.3
1,097,097 - MPMX20_01041 0.11 -0.3
1,097,097 - MPMX20_01041 0.11 -1.4
1,097,110 + MPMX20_01041 0.12 +0.1
1,097,113 - MPMX20_01041 0.12 -1.0
1,097,118 - MPMX20_01041 0.13 -0.5
1,097,135 + MPMX20_01041 0.14 +0.1
1,097,179 - MPMX20_01041 0.16 -1.4
1,097,189 - MPMX20_01041 0.17 -1.0
1,097,338 + MPMX20_01041 0.25 -0.0
1,097,348 + MPMX20_01041 0.26 -1.1
1,097,351 - MPMX20_01041 0.26 -1.0
1,097,422 - MPMX20_01041 0.30 -1.2
1,097,469 - MPMX20_01041 0.32 +0.3
1,097,520 + MPMX20_01041 0.35 -0.4
1,097,587 - MPMX20_01041 0.39 +0.0
1,097,640 + MPMX20_01041 0.42 +1.1
1,097,792 + MPMX20_01041 0.50 +1.6
1,097,797 + MPMX20_01041 0.51 +0.2
1,097,799 + MPMX20_01041 0.51 +0.7
1,097,868 + MPMX20_01041 0.55 +0.5
1,097,868 + MPMX20_01041 0.55 +0.3
1,097,876 - MPMX20_01041 0.55 -0.5
1,097,889 - MPMX20_01041 0.56 -0.6

Or see this region's nucleotide sequence