Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02350

Experiment: 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02349 and MPMX20_02350 are separated by 67 nucleotidesMPMX20_02350 and MPMX20_02351 are separated by 173 nucleotides MPMX20_02349: MPMX20_02349 - Negative regulator of SacY activity, at 2,475,350 to 2,476,720 _02349 MPMX20_02350: MPMX20_02350 - Sucrose porin, at 2,476,788 to 2,478,305 _02350 MPMX20_02351: MPMX20_02351 - Fructokinase, at 2,478,479 to 2,479,384 _02351 Position (kb) 2476 2477 2478 2479Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2475.871 kb on - strand, within MPMX20_02349at 2475.871 kb on - strand, within MPMX20_02349at 2475.883 kb on - strand, within MPMX20_02349at 2475.883 kb on - strand, within MPMX20_02349at 2475.887 kb on + strand, within MPMX20_02349at 2475.919 kb on + strand, within MPMX20_02349at 2475.952 kb on + strand, within MPMX20_02349at 2475.952 kb on + strand, within MPMX20_02349at 2475.952 kb on - strand, within MPMX20_02349at 2475.982 kb on + strand, within MPMX20_02349at 2475.982 kb on + strand, within MPMX20_02349at 2476.063 kb on - strand, within MPMX20_02349at 2476.098 kb on - strand, within MPMX20_02349at 2476.134 kb on + strand, within MPMX20_02349at 2476.134 kb on + strand, within MPMX20_02349at 2476.142 kb on - strand, within MPMX20_02349at 2476.142 kb on - strand, within MPMX20_02349at 2476.142 kb on - strand, within MPMX20_02349at 2476.142 kb on - strand, within MPMX20_02349at 2476.142 kb on - strand, within MPMX20_02349at 2476.150 kb on + strand, within MPMX20_02349at 2476.177 kb on + strand, within MPMX20_02349at 2476.268 kb on - strand, within MPMX20_02349at 2476.280 kb on + strand, within MPMX20_02349at 2476.299 kb on + strand, within MPMX20_02349at 2476.316 kb on + strand, within MPMX20_02349at 2476.326 kb on + strand, within MPMX20_02349at 2476.334 kb on - strand, within MPMX20_02349at 2476.414 kb on + strand, within MPMX20_02349at 2476.422 kb on - strand, within MPMX20_02349at 2476.458 kb on - strand, within MPMX20_02349at 2476.505 kb on - strand, within MPMX20_02349at 2476.505 kb on - strand, within MPMX20_02349at 2476.572 kb on + strand, within MPMX20_02349at 2476.626 kb on + strandat 2476.649 kb on - strandat 2476.726 kb on + strandat 2476.737 kb on - strandat 2476.762 kb on + strandat 2476.762 kb on + strandat 2476.786 kb on + strandat 2476.786 kb on + strandat 2476.922 kb on + strandat 2476.930 kb on - strandat 2476.958 kb on + strand, within MPMX20_02350at 2476.958 kb on + strand, within MPMX20_02350at 2476.966 kb on - strand, within MPMX20_02350at 2476.966 kb on - strand, within MPMX20_02350at 2476.978 kb on - strand, within MPMX20_02350at 2476.985 kb on - strand, within MPMX20_02350at 2477.023 kb on - strand, within MPMX20_02350at 2477.120 kb on + strand, within MPMX20_02350at 2477.121 kb on + strand, within MPMX20_02350at 2477.127 kb on + strand, within MPMX20_02350at 2477.127 kb on + strand, within MPMX20_02350at 2477.128 kb on - strand, within MPMX20_02350at 2477.165 kb on - strand, within MPMX20_02350at 2477.165 kb on - strand, within MPMX20_02350at 2477.247 kb on - strand, within MPMX20_02350at 2477.247 kb on - strand, within MPMX20_02350at 2477.274 kb on + strand, within MPMX20_02350at 2477.274 kb on + strand, within MPMX20_02350at 2477.372 kb on - strand, within MPMX20_02350at 2477.406 kb on - strand, within MPMX20_02350at 2477.497 kb on - strand, within MPMX20_02350at 2477.516 kb on - strand, within MPMX20_02350at 2477.617 kb on + strand, within MPMX20_02350at 2477.644 kb on - strand, within MPMX20_02350at 2477.741 kb on + strand, within MPMX20_02350at 2477.766 kb on - strand, within MPMX20_02350at 2477.783 kb on - strand, within MPMX20_02350at 2477.824 kb on + strand, within MPMX20_02350at 2477.824 kb on + strand, within MPMX20_02350at 2477.824 kb on + strand, within MPMX20_02350at 2477.824 kb on + strand, within MPMX20_02350at 2477.825 kb on + strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.832 kb on - strand, within MPMX20_02350at 2477.845 kb on + strand, within MPMX20_02350at 2477.853 kb on - strand, within MPMX20_02350at 2477.865 kb on - strand, within MPMX20_02350at 2477.879 kb on + strand, within MPMX20_02350at 2477.890 kb on - strand, within MPMX20_02350at 2477.961 kb on - strand, within MPMX20_02350at 2478.001 kb on - strand, within MPMX20_02350at 2478.001 kb on - strand, within MPMX20_02350at 2478.038 kb on - strand, within MPMX20_02350at 2478.043 kb on + strand, within MPMX20_02350at 2478.048 kb on - strand, within MPMX20_02350at 2478.117 kb on - strand, within MPMX20_02350at 2478.202 kb on - strandat 2478.442 kb on + strandat 2478.500 kb on - strandat 2478.548 kb on - strandat 2478.550 kb on + strandat 2478.553 kb on - strandat 2478.558 kb on - strandat 2478.619 kb on - strand, within MPMX20_02351at 2478.632 kb on + strand, within MPMX20_02351at 2478.640 kb on - strand, within MPMX20_02351at 2478.640 kb on - strand, within MPMX20_02351at 2478.720 kb on + strand, within MPMX20_02351at 2478.780 kb on + strand, within MPMX20_02351at 2478.841 kb on + strand, within MPMX20_02351at 2478.862 kb on + strand, within MPMX20_02351at 2478.870 kb on - strand, within MPMX20_02351at 2478.988 kb on + strand, within MPMX20_02351at 2478.988 kb on + strand, within MPMX20_02351at 2478.996 kb on - strand, within MPMX20_02351at 2479.000 kb on + strand, within MPMX20_02351at 2479.000 kb on + strand, within MPMX20_02351at 2479.030 kb on - strand, within MPMX20_02351at 2479.035 kb on - strand, within MPMX20_02351at 2479.087 kb on + strand, within MPMX20_02351at 2479.176 kb on + strand, within MPMX20_02351at 2479.287 kb on + strand, within MPMX20_02351

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,475,871 - MPMX20_02349 0.38 -2.6
2,475,871 - MPMX20_02349 0.38 -1.1
2,475,883 - MPMX20_02349 0.39 -2.4
2,475,883 - MPMX20_02349 0.39 +2.1
2,475,887 + MPMX20_02349 0.39 +0.9
2,475,919 + MPMX20_02349 0.42 -2.3
2,475,952 + MPMX20_02349 0.44 -0.5
2,475,952 + MPMX20_02349 0.44 -0.8
2,475,952 - MPMX20_02349 0.44 -3.0
2,475,982 + MPMX20_02349 0.46 +0.8
2,475,982 + MPMX20_02349 0.46 +2.0
2,476,063 - MPMX20_02349 0.52 +0.7
2,476,098 - MPMX20_02349 0.55 +1.5
2,476,134 + MPMX20_02349 0.57 +0.1
2,476,134 + MPMX20_02349 0.57 -1.3
2,476,142 - MPMX20_02349 0.58 -2.5
2,476,142 - MPMX20_02349 0.58 +1.1
2,476,142 - MPMX20_02349 0.58 +0.2
2,476,142 - MPMX20_02349 0.58 -0.7
2,476,142 - MPMX20_02349 0.58 +0.2
2,476,150 + MPMX20_02349 0.58 +3.3
2,476,177 + MPMX20_02349 0.60 +1.9
2,476,268 - MPMX20_02349 0.67 +3.3
2,476,280 + MPMX20_02349 0.68 +0.3
2,476,299 + MPMX20_02349 0.69 +0.9
2,476,316 + MPMX20_02349 0.70 -0.1
2,476,326 + MPMX20_02349 0.71 +1.3
2,476,334 - MPMX20_02349 0.72 +0.4
2,476,414 + MPMX20_02349 0.78 -1.8
2,476,422 - MPMX20_02349 0.78 +0.1
2,476,458 - MPMX20_02349 0.81 +0.6
2,476,505 - MPMX20_02349 0.84 -1.8
2,476,505 - MPMX20_02349 0.84 -1.3
2,476,572 + MPMX20_02349 0.89 -0.1
2,476,626 + +0.9
2,476,649 - -0.8
2,476,726 + +3.2
2,476,737 - +0.7
2,476,762 + -1.5
2,476,762 + -0.2
2,476,786 + -0.9
2,476,786 + +1.2
2,476,922 + -0.1
2,476,930 - +3.1
2,476,958 + MPMX20_02350 0.11 -0.5
2,476,958 + MPMX20_02350 0.11 +0.5
2,476,966 - MPMX20_02350 0.12 +0.2
2,476,966 - MPMX20_02350 0.12 +2.1
2,476,978 - MPMX20_02350 0.13 +1.8
2,476,985 - MPMX20_02350 0.13 -2.3
2,477,023 - MPMX20_02350 0.15 +0.3
2,477,120 + MPMX20_02350 0.22 -0.6
2,477,121 + MPMX20_02350 0.22 -2.1
2,477,127 + MPMX20_02350 0.22 -1.5
2,477,127 + MPMX20_02350 0.22 -0.2
2,477,128 - MPMX20_02350 0.22 -0.2
2,477,165 - MPMX20_02350 0.25 -0.5
2,477,165 - MPMX20_02350 0.25 +1.8
2,477,247 - MPMX20_02350 0.30 -1.3
2,477,247 - MPMX20_02350 0.30 +0.0
2,477,274 + MPMX20_02350 0.32 -1.6
2,477,274 + MPMX20_02350 0.32 -1.3
2,477,372 - MPMX20_02350 0.38 +0.7
2,477,406 - MPMX20_02350 0.41 +1.5
2,477,497 - MPMX20_02350 0.47 -0.8
2,477,516 - MPMX20_02350 0.48 +1.9
2,477,617 + MPMX20_02350 0.55 -1.8
2,477,644 - MPMX20_02350 0.56 -0.5
2,477,741 + MPMX20_02350 0.63 +0.1
2,477,766 - MPMX20_02350 0.64 -0.3
2,477,783 - MPMX20_02350 0.66 -1.3
2,477,824 + MPMX20_02350 0.68 -2.8
2,477,824 + MPMX20_02350 0.68 -1.0
2,477,824 + MPMX20_02350 0.68 +0.2
2,477,824 + MPMX20_02350 0.68 -0.5
2,477,825 + MPMX20_02350 0.68 -2.7
2,477,832 - MPMX20_02350 0.69 -0.5
2,477,832 - MPMX20_02350 0.69 +1.4
2,477,832 - MPMX20_02350 0.69 +2.0
2,477,832 - MPMX20_02350 0.69 -0.5
2,477,832 - MPMX20_02350 0.69 -0.3
2,477,832 - MPMX20_02350 0.69 +0.2
2,477,832 - MPMX20_02350 0.69 -0.8
2,477,832 - MPMX20_02350 0.69 -0.4
2,477,832 - MPMX20_02350 0.69 -2.2
2,477,832 - MPMX20_02350 0.69 -1.4
2,477,832 - MPMX20_02350 0.69 +0.9
2,477,845 + MPMX20_02350 0.70 -0.3
2,477,853 - MPMX20_02350 0.70 -1.4
2,477,865 - MPMX20_02350 0.71 +0.2
2,477,879 + MPMX20_02350 0.72 -2.8
2,477,890 - MPMX20_02350 0.73 +1.3
2,477,961 - MPMX20_02350 0.77 -2.6
2,478,001 - MPMX20_02350 0.80 -0.9
2,478,001 - MPMX20_02350 0.80 -0.5
2,478,038 - MPMX20_02350 0.82 +2.2
2,478,043 + MPMX20_02350 0.83 -0.0
2,478,048 - MPMX20_02350 0.83 -2.5
2,478,117 - MPMX20_02350 0.88 -2.5
2,478,202 - -2.9
2,478,442 + +1.7
2,478,500 - -0.3
2,478,548 - -1.8
2,478,550 + -0.1
2,478,553 - -0.0
2,478,558 - +1.9
2,478,619 - MPMX20_02351 0.15 +1.5
2,478,632 + MPMX20_02351 0.17 -1.0
2,478,640 - MPMX20_02351 0.18 -1.9
2,478,640 - MPMX20_02351 0.18 +1.2
2,478,720 + MPMX20_02351 0.27 -2.9
2,478,780 + MPMX20_02351 0.33 -1.2
2,478,841 + MPMX20_02351 0.40 -2.3
2,478,862 + MPMX20_02351 0.42 -0.4
2,478,870 - MPMX20_02351 0.43 -1.5
2,478,988 + MPMX20_02351 0.56 +1.2
2,478,988 + MPMX20_02351 0.56 +0.2
2,478,996 - MPMX20_02351 0.57 +1.9
2,479,000 + MPMX20_02351 0.58 -0.9
2,479,000 + MPMX20_02351 0.58 -0.1
2,479,030 - MPMX20_02351 0.61 -1.5
2,479,035 - MPMX20_02351 0.61 -0.3
2,479,087 + MPMX20_02351 0.67 -1.4
2,479,176 + MPMX20_02351 0.77 -0.7
2,479,287 + MPMX20_02351 0.89 -0.9

Or see this region's nucleotide sequence