Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00299

Experiment: 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00297 and MPMX20_00298 overlap by 1 nucleotidesMPMX20_00298 and MPMX20_00299 are separated by 10 nucleotidesMPMX20_00299 and MPMX20_00300 are separated by 84 nucleotides MPMX20_00297: MPMX20_00297 - putative sugar kinase YdjH, at 317,680 to 318,684 _00297 MPMX20_00298: MPMX20_00298 - putative fructose-bisphosphate aldolase, at 318,684 to 319,544 _00298 MPMX20_00299: MPMX20_00299 - hypothetical protein, at 319,555 to 320,241 _00299 MPMX20_00300: MPMX20_00300 - Ribose import binding protein RbsB, at 320,326 to 321,267 _00300 Position (kb) 319 320 321Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 318.681 kb on + strandat 318.692 kb on + strandat 318.748 kb on + strandat 318.754 kb on - strandat 318.754 kb on - strandat 319.013 kb on - strand, within MPMX20_00298at 319.076 kb on - strand, within MPMX20_00298at 319.148 kb on + strand, within MPMX20_00298at 319.176 kb on - strand, within MPMX20_00298at 319.187 kb on - strand, within MPMX20_00298at 319.246 kb on + strand, within MPMX20_00298at 319.248 kb on + strand, within MPMX20_00298at 319.248 kb on + strand, within MPMX20_00298at 319.256 kb on - strand, within MPMX20_00298at 319.256 kb on - strand, within MPMX20_00298at 319.256 kb on - strand, within MPMX20_00298at 319.256 kb on - strand, within MPMX20_00298at 319.256 kb on - strand, within MPMX20_00298at 319.256 kb on - strand, within MPMX20_00298at 319.270 kb on + strand, within MPMX20_00298at 319.278 kb on - strand, within MPMX20_00298at 319.303 kb on + strand, within MPMX20_00298at 319.303 kb on + strand, within MPMX20_00298at 319.303 kb on + strand, within MPMX20_00298at 319.305 kb on + strand, within MPMX20_00298at 319.313 kb on - strand, within MPMX20_00298at 319.337 kb on + strand, within MPMX20_00298at 319.337 kb on + strand, within MPMX20_00298at 319.337 kb on + strand, within MPMX20_00298at 319.337 kb on + strand, within MPMX20_00298at 319.345 kb on - strand, within MPMX20_00298at 319.365 kb on + strand, within MPMX20_00298at 319.420 kb on + strand, within MPMX20_00298at 319.445 kb on - strand, within MPMX20_00298at 319.472 kb on + strandat 319.480 kb on - strandat 319.497 kb on + strandat 319.509 kb on - strandat 319.511 kb on + strandat 319.511 kb on + strandat 319.511 kb on + strandat 319.511 kb on + strandat 319.511 kb on + strandat 319.519 kb on - strandat 319.519 kb on - strandat 319.519 kb on - strandat 319.569 kb on + strandat 319.569 kb on + strandat 319.573 kb on + strandat 319.576 kb on - strandat 319.577 kb on - strandat 319.588 kb on + strandat 319.588 kb on + strandat 319.596 kb on - strandat 319.659 kb on - strand, within MPMX20_00299at 319.666 kb on + strand, within MPMX20_00299at 319.693 kb on - strand, within MPMX20_00299at 319.706 kb on - strand, within MPMX20_00299at 319.737 kb on + strand, within MPMX20_00299at 319.737 kb on - strand, within MPMX20_00299at 319.745 kb on - strand, within MPMX20_00299at 319.745 kb on - strand, within MPMX20_00299at 319.767 kb on - strand, within MPMX20_00299at 319.773 kb on + strand, within MPMX20_00299at 319.798 kb on + strand, within MPMX20_00299at 319.798 kb on + strand, within MPMX20_00299at 319.798 kb on + strand, within MPMX20_00299at 319.799 kb on - strand, within MPMX20_00299at 319.806 kb on - strand, within MPMX20_00299at 319.806 kb on - strand, within MPMX20_00299at 319.806 kb on - strand, within MPMX20_00299at 319.806 kb on - strand, within MPMX20_00299at 319.806 kb on - strand, within MPMX20_00299at 319.806 kb on - strand, within MPMX20_00299at 319.811 kb on - strand, within MPMX20_00299at 319.940 kb on + strand, within MPMX20_00299at 319.943 kb on - strand, within MPMX20_00299at 319.955 kb on + strand, within MPMX20_00299at 320.025 kb on + strand, within MPMX20_00299at 320.025 kb on + strand, within MPMX20_00299at 320.025 kb on + strand, within MPMX20_00299at 320.026 kb on + strand, within MPMX20_00299at 320.033 kb on - strand, within MPMX20_00299at 320.034 kb on - strand, within MPMX20_00299at 320.034 kb on - strand, within MPMX20_00299at 320.042 kb on - strand, within MPMX20_00299at 320.043 kb on - strand, within MPMX20_00299at 320.073 kb on - strand, within MPMX20_00299at 320.085 kb on + strand, within MPMX20_00299at 320.093 kb on - strand, within MPMX20_00299at 320.132 kb on - strand, within MPMX20_00299at 320.132 kb on - strand, within MPMX20_00299at 320.148 kb on + strand, within MPMX20_00299at 320.164 kb on + strand, within MPMX20_00299at 320.178 kb on - strandat 320.202 kb on - strandat 320.248 kb on + strandat 320.256 kb on - strandat 320.270 kb on + strandat 320.278 kb on - strandat 320.300 kb on + strandat 320.331 kb on + strandat 320.336 kb on + strandat 320.344 kb on - strandat 320.399 kb on - strandat 320.558 kb on - strand, within MPMX20_00300at 320.589 kb on + strand, within MPMX20_00300at 320.663 kb on - strand, within MPMX20_00300at 320.670 kb on + strand, within MPMX20_00300at 320.770 kb on + strand, within MPMX20_00300at 320.770 kb on + strand, within MPMX20_00300at 320.770 kb on + strand, within MPMX20_00300at 320.778 kb on - strand, within MPMX20_00300at 320.778 kb on - strand, within MPMX20_00300at 320.793 kb on - strand, within MPMX20_00300at 320.816 kb on + strand, within MPMX20_00300at 320.869 kb on + strand, within MPMX20_00300at 320.887 kb on + strand, within MPMX20_00300at 321.007 kb on + strand, within MPMX20_00300at 321.073 kb on - strand, within MPMX20_00300at 321.080 kb on + strand, within MPMX20_00300at 321.100 kb on - strand, within MPMX20_00300at 321.149 kb on + strand, within MPMX20_00300at 321.176 kb on - strandat 321.176 kb on - strandat 321.184 kb on - strandat 321.199 kb on - strandat 321.236 kb on - strandat 321.236 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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318,681 + -0.3
318,692 + -1.1
318,748 + +1.2
318,754 - +0.7
318,754 - +1.0
319,013 - MPMX20_00298 0.38 +1.5
319,076 - MPMX20_00298 0.46 +1.3
319,148 + MPMX20_00298 0.54 -0.8
319,176 - MPMX20_00298 0.57 +0.4
319,187 - MPMX20_00298 0.58 +1.2
319,246 + MPMX20_00298 0.65 -2.9
319,248 + MPMX20_00298 0.66 -2.8
319,248 + MPMX20_00298 0.66 -0.1
319,256 - MPMX20_00298 0.66 -1.4
319,256 - MPMX20_00298 0.66 +0.9
319,256 - MPMX20_00298 0.66 +2.7
319,256 - MPMX20_00298 0.66 -1.7
319,256 - MPMX20_00298 0.66 -0.3
319,256 - MPMX20_00298 0.66 -1.7
319,270 + MPMX20_00298 0.68 -0.3
319,278 - MPMX20_00298 0.69 -0.3
319,303 + MPMX20_00298 0.72 -0.8
319,303 + MPMX20_00298 0.72 +0.2
319,303 + MPMX20_00298 0.72 -0.3
319,305 + MPMX20_00298 0.72 +0.2
319,313 - MPMX20_00298 0.73 -0.7
319,337 + MPMX20_00298 0.76 +1.3
319,337 + MPMX20_00298 0.76 +0.7
319,337 + MPMX20_00298 0.76 -0.7
319,337 + MPMX20_00298 0.76 -1.3
319,345 - MPMX20_00298 0.77 -0.1
319,365 + MPMX20_00298 0.79 -2.8
319,420 + MPMX20_00298 0.85 -2.3
319,445 - MPMX20_00298 0.88 +0.1
319,472 + +0.6
319,480 - -2.9
319,497 + -0.8
319,509 - +0.2
319,511 + -1.1
319,511 + -0.4
319,511 + -2.3
319,511 + -0.6
319,511 + +0.7
319,519 - -1.1
319,519 - -0.8
319,519 - -1.5
319,569 + -0.6
319,569 + -0.1
319,573 + +0.2
319,576 - +0.2
319,577 - -1.4
319,588 + +1.3
319,588 + +4.9
319,596 - +0.9
319,659 - MPMX20_00299 0.15 -0.6
319,666 + MPMX20_00299 0.16 -1.4
319,693 - MPMX20_00299 0.20 +1.5
319,706 - MPMX20_00299 0.22 -0.8
319,737 + MPMX20_00299 0.26 +0.6
319,737 - MPMX20_00299 0.26 +1.4
319,745 - MPMX20_00299 0.28 -1.7
319,745 - MPMX20_00299 0.28 -0.5
319,767 - MPMX20_00299 0.31 -2.6
319,773 + MPMX20_00299 0.32 +2.0
319,798 + MPMX20_00299 0.35 -0.7
319,798 + MPMX20_00299 0.35 +0.7
319,798 + MPMX20_00299 0.35 +0.9
319,799 - MPMX20_00299 0.36 -1.4
319,806 - MPMX20_00299 0.37 +0.3
319,806 - MPMX20_00299 0.37 -1.1
319,806 - MPMX20_00299 0.37 -3.6
319,806 - MPMX20_00299 0.37 +0.2
319,806 - MPMX20_00299 0.37 -1.4
319,806 - MPMX20_00299 0.37 +0.4
319,811 - MPMX20_00299 0.37 -0.8
319,940 + MPMX20_00299 0.56 -1.4
319,943 - MPMX20_00299 0.56 -1.1
319,955 + MPMX20_00299 0.58 +0.7
320,025 + MPMX20_00299 0.68 -2.6
320,025 + MPMX20_00299 0.68 -1.1
320,025 + MPMX20_00299 0.68 +1.7
320,026 + MPMX20_00299 0.69 +1.4
320,033 - MPMX20_00299 0.70 -2.5
320,034 - MPMX20_00299 0.70 -1.1
320,034 - MPMX20_00299 0.70 +2.0
320,042 - MPMX20_00299 0.71 -0.8
320,043 - MPMX20_00299 0.71 +0.5
320,073 - MPMX20_00299 0.75 +2.0
320,085 + MPMX20_00299 0.77 +1.3
320,093 - MPMX20_00299 0.78 +0.1
320,132 - MPMX20_00299 0.84 -0.8
320,132 - MPMX20_00299 0.84 -0.2
320,148 + MPMX20_00299 0.86 +0.7
320,164 + MPMX20_00299 0.89 -1.1
320,178 - -2.8
320,202 - +0.3
320,248 + +2.0
320,256 - -1.4
320,270 + -1.3
320,278 - +1.1
320,300 + -1.3
320,331 + +0.5
320,336 + -0.2
320,344 - -0.5
320,399 - +0.8
320,558 - MPMX20_00300 0.25 +1.6
320,589 + MPMX20_00300 0.28 +0.3
320,663 - MPMX20_00300 0.36 +1.8
320,670 + MPMX20_00300 0.37 +2.0
320,770 + MPMX20_00300 0.47 -1.7
320,770 + MPMX20_00300 0.47 +1.6
320,770 + MPMX20_00300 0.47 -1.6
320,778 - MPMX20_00300 0.48 -0.3
320,778 - MPMX20_00300 0.48 -0.8
320,793 - MPMX20_00300 0.50 +1.8
320,816 + MPMX20_00300 0.52 +2.0
320,869 + MPMX20_00300 0.58 -0.1
320,887 + MPMX20_00300 0.60 +0.4
321,007 + MPMX20_00300 0.72 +0.8
321,073 - MPMX20_00300 0.79 +0.8
321,080 + MPMX20_00300 0.80 -1.7
321,100 - MPMX20_00300 0.82 -1.0
321,149 + MPMX20_00300 0.87 +2.8
321,176 - +1.0
321,176 - +0.1
321,184 - -1.4
321,199 - +0.1
321,236 - +0.2
321,236 - +0.6

Or see this region's nucleotide sequence