Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04591 and MPMX20_04592 are separated by 43 nucleotides MPMX20_04592 and MPMX20_04593 are separated by 74 nucleotides MPMX20_04593 and MPMX20_04594 are separated by 83 nucleotides
MPMX20_04591: MPMX20_04591 - Putative 2,3-dihydroxypropane-1-sulfonate exporter, at 4,803,284 to 4,804,666
_04591
MPMX20_04592: MPMX20_04592 - Putative 2,3-dihydroxypropane-1-sulfonate exporter, at 4,804,710 to 4,806,134
_04592
MPMX20_04593: MPMX20_04593 - Porin OmpL, at 4,806,209 to 4,806,895
_04593
MPMX20_04594: MPMX20_04594 - GTP-binding protein TypA/BipA, at 4,806,979 to 4,808,802
_04594
Position (kb) 4804
4805
4806
4807 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4803.774 kb on - strand, within MPMX20_04591 at 4803.777 kb on + strand, within MPMX20_04591 at 4803.790 kb on + strand, within MPMX20_04591 at 4803.790 kb on + strand, within MPMX20_04591 at 4803.790 kb on + strand, within MPMX20_04591 at 4803.790 kb on + strand, within MPMX20_04591 at 4803.798 kb on - strand, within MPMX20_04591 at 4803.798 kb on - strand, within MPMX20_04591 at 4803.798 kb on - strand, within MPMX20_04591 at 4803.798 kb on - strand, within MPMX20_04591 at 4803.798 kb on - strand, within MPMX20_04591 at 4803.798 kb on - strand, within MPMX20_04591 at 4803.798 kb on - strand, within MPMX20_04591 at 4803.834 kb on + strand, within MPMX20_04591 at 4803.878 kb on - strand, within MPMX20_04591 at 4803.889 kb on + strand, within MPMX20_04591 at 4803.921 kb on - strand, within MPMX20_04591 at 4803.922 kb on - strand, within MPMX20_04591 at 4804.026 kb on + strand, within MPMX20_04591 at 4804.026 kb on + strand, within MPMX20_04591 at 4804.044 kb on - strand, within MPMX20_04591 at 4804.104 kb on + strand, within MPMX20_04591 at 4804.112 kb on - strand, within MPMX20_04591 at 4804.117 kb on + strand, within MPMX20_04591 at 4804.204 kb on + strand, within MPMX20_04591 at 4804.303 kb on - strand, within MPMX20_04591 at 4804.310 kb on + strand, within MPMX20_04591 at 4804.328 kb on + strand, within MPMX20_04591 at 4804.329 kb on + strand, within MPMX20_04591 at 4804.333 kb on + strand, within MPMX20_04591 at 4804.338 kb on + strand, within MPMX20_04591 at 4804.383 kb on - strand, within MPMX20_04591 at 4804.420 kb on - strand, within MPMX20_04591 at 4804.441 kb on + strand, within MPMX20_04591 at 4804.492 kb on + strand, within MPMX20_04591 at 4804.593 kb on + strand at 4804.616 kb on - strand at 4804.729 kb on + strand at 4804.737 kb on - strand at 4804.749 kb on - strand at 4804.749 kb on - strand at 4804.794 kb on - strand at 4804.804 kb on + strand at 4804.837 kb on - strand at 4804.845 kb on - strand at 4804.855 kb on - strand, within MPMX20_04592 at 4804.887 kb on + strand, within MPMX20_04592 at 4804.990 kb on + strand, within MPMX20_04592 at 4805.007 kb on - strand, within MPMX20_04592 at 4805.070 kb on + strand, within MPMX20_04592 at 4805.098 kb on + strand, within MPMX20_04592 at 4805.106 kb on + strand, within MPMX20_04592 at 4805.106 kb on - strand, within MPMX20_04592 at 4805.106 kb on - strand, within MPMX20_04592 at 4805.106 kb on - strand, within MPMX20_04592 at 4805.106 kb on - strand, within MPMX20_04592 at 4805.106 kb on - strand, within MPMX20_04592 at 4805.140 kb on - strand, within MPMX20_04592 at 4805.200 kb on + strand, within MPMX20_04592 at 4805.213 kb on + strand, within MPMX20_04592 at 4805.213 kb on + strand, within MPMX20_04592 at 4805.214 kb on - strand, within MPMX20_04592 at 4805.221 kb on - strand, within MPMX20_04592 at 4805.221 kb on - strand, within MPMX20_04592 at 4805.280 kb on - strand, within MPMX20_04592 at 4805.294 kb on - strand, within MPMX20_04592 at 4805.312 kb on + strand, within MPMX20_04592 at 4805.320 kb on - strand, within MPMX20_04592 at 4805.325 kb on + strand, within MPMX20_04592 at 4805.338 kb on - strand, within MPMX20_04592 at 4805.346 kb on - strand, within MPMX20_04592 at 4805.346 kb on - strand, within MPMX20_04592 at 4805.348 kb on - strand, within MPMX20_04592 at 4805.368 kb on - strand, within MPMX20_04592 at 4805.368 kb on - strand, within MPMX20_04592 at 4805.375 kb on + strand, within MPMX20_04592 at 4805.391 kb on + strand, within MPMX20_04592 at 4805.446 kb on - strand, within MPMX20_04592 at 4805.450 kb on + strand, within MPMX20_04592 at 4805.450 kb on + strand, within MPMX20_04592 at 4805.450 kb on + strand, within MPMX20_04592 at 4805.451 kb on - strand, within MPMX20_04592 at 4805.458 kb on - strand, within MPMX20_04592 at 4805.458 kb on - strand, within MPMX20_04592 at 4805.497 kb on + strand, within MPMX20_04592 at 4805.497 kb on + strand, within MPMX20_04592 at 4805.500 kb on - strand, within MPMX20_04592 at 4805.505 kb on - strand, within MPMX20_04592 at 4805.598 kb on + strand, within MPMX20_04592 at 4805.606 kb on - strand, within MPMX20_04592 at 4805.606 kb on - strand, within MPMX20_04592 at 4805.606 kb on - strand, within MPMX20_04592 at 4805.622 kb on + strand, within MPMX20_04592 at 4805.626 kb on + strand, within MPMX20_04592 at 4805.657 kb on - strand, within MPMX20_04592 at 4805.693 kb on + strand, within MPMX20_04592 at 4805.753 kb on - strand, within MPMX20_04592 at 4805.773 kb on + strand, within MPMX20_04592 at 4805.829 kb on + strand, within MPMX20_04592 at 4805.838 kb on - strand, within MPMX20_04592 at 4805.881 kb on + strand, within MPMX20_04592 at 4805.919 kb on + strand, within MPMX20_04592 at 4805.919 kb on + strand, within MPMX20_04592 at 4805.924 kb on + strand, within MPMX20_04592 at 4805.924 kb on + strand, within MPMX20_04592 at 4805.924 kb on + strand, within MPMX20_04592 at 4805.924 kb on + strand, within MPMX20_04592 at 4805.924 kb on + strand, within MPMX20_04592 at 4805.924 kb on + strand, within MPMX20_04592 at 4805.924 kb on + strand, within MPMX20_04592 at 4805.924 kb on + strand, within MPMX20_04592 at 4805.932 kb on - strand, within MPMX20_04592 at 4805.932 kb on - strand, within MPMX20_04592 at 4805.937 kb on + strand, within MPMX20_04592 at 4805.937 kb on + strand, within MPMX20_04592 at 4806.001 kb on + strand at 4806.020 kb on + strand at 4806.039 kb on + strand at 4806.093 kb on + strand at 4806.093 kb on + strand at 4806.121 kb on - strand at 4806.143 kb on - strand at 4806.203 kb on - strand at 4806.227 kb on + strand at 4806.241 kb on - strand at 4806.242 kb on + strand at 4806.250 kb on + strand at 4806.250 kb on - strand at 4806.290 kb on + strand, within MPMX20_04593 at 4806.298 kb on - strand, within MPMX20_04593 at 4806.311 kb on - strand, within MPMX20_04593 at 4806.318 kb on + strand, within MPMX20_04593 at 4806.320 kb on + strand, within MPMX20_04593 at 4806.321 kb on - strand, within MPMX20_04593 at 4806.326 kb on - strand, within MPMX20_04593 at 4806.326 kb on - strand, within MPMX20_04593 at 4806.359 kb on + strand, within MPMX20_04593 at 4806.367 kb on - strand, within MPMX20_04593 at 4806.369 kb on - strand, within MPMX20_04593 at 4806.378 kb on + strand, within MPMX20_04593 at 4806.378 kb on + strand, within MPMX20_04593 at 4806.386 kb on - strand, within MPMX20_04593 at 4806.386 kb on - strand, within MPMX20_04593 at 4806.393 kb on + strand, within MPMX20_04593 at 4806.402 kb on + strand, within MPMX20_04593 at 4806.402 kb on + strand, within MPMX20_04593 at 4806.402 kb on + strand, within MPMX20_04593 at 4806.403 kb on + strand, within MPMX20_04593 at 4806.410 kb on - strand, within MPMX20_04593 at 4806.410 kb on - strand, within MPMX20_04593 at 4806.422 kb on - strand, within MPMX20_04593 at 4806.483 kb on - strand, within MPMX20_04593 at 4806.504 kb on - strand, within MPMX20_04593 at 4806.555 kb on + strand, within MPMX20_04593 at 4806.555 kb on + strand, within MPMX20_04593 at 4806.555 kb on + strand, within MPMX20_04593 at 4806.555 kb on + strand, within MPMX20_04593 at 4806.555 kb on + strand, within MPMX20_04593 at 4806.563 kb on - strand, within MPMX20_04593 at 4806.563 kb on - strand, within MPMX20_04593 at 4806.563 kb on - strand, within MPMX20_04593 at 4806.563 kb on - strand, within MPMX20_04593 at 4806.611 kb on - strand, within MPMX20_04593 at 4806.615 kb on - strand, within MPMX20_04593 at 4806.693 kb on + strand, within MPMX20_04593 at 4806.701 kb on - strand, within MPMX20_04593 at 4806.757 kb on - strand, within MPMX20_04593 at 4806.757 kb on - strand, within MPMX20_04593 at 4806.813 kb on - strand, within MPMX20_04593 at 4806.834 kb on + strand at 4806.834 kb on + strand at 4806.842 kb on + strand at 4806.842 kb on + strand at 4806.875 kb on + strand at 4806.875 kb on + strand at 4806.875 kb on + strand at 4806.875 kb on + strand at 4806.875 kb on + strand at 4806.875 kb on + strand at 4806.875 kb on + strand at 4806.883 kb on - strand at 4806.883 kb on - strand at 4806.883 kb on - strand at 4806.883 kb on - strand at 4806.883 kb on - strand at 4806.883 kb on - strand at 4806.883 kb on - strand at 4806.883 kb on - strand at 4806.883 kb on - strand at 4806.883 kb on - strand at 4806.951 kb on + strand at 4806.953 kb on - strand at 4807.072 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,803,774 - MPMX20_04591 0.35 +0.9 4,803,777 + MPMX20_04591 0.36 -0.1 4,803,790 + MPMX20_04591 0.37 -0.4 4,803,790 + MPMX20_04591 0.37 -1.5 4,803,790 + MPMX20_04591 0.37 -1.2 4,803,790 + MPMX20_04591 0.37 +0.6 4,803,798 - MPMX20_04591 0.37 -0.7 4,803,798 - MPMX20_04591 0.37 -0.1 4,803,798 - MPMX20_04591 0.37 +2.3 4,803,798 - MPMX20_04591 0.37 +0.1 4,803,798 - MPMX20_04591 0.37 +1.5 4,803,798 - MPMX20_04591 0.37 -0.9 4,803,798 - MPMX20_04591 0.37 -0.7 4,803,834 + MPMX20_04591 0.40 -1.3 4,803,878 - MPMX20_04591 0.43 -0.2 4,803,889 + MPMX20_04591 0.44 +0.5 4,803,921 - MPMX20_04591 0.46 +0.1 4,803,922 - MPMX20_04591 0.46 +0.0 4,804,026 + MPMX20_04591 0.54 -1.9 4,804,026 + MPMX20_04591 0.54 +0.5 4,804,044 - MPMX20_04591 0.55 -0.6 4,804,104 + MPMX20_04591 0.59 +2.0 4,804,112 - MPMX20_04591 0.60 -1.0 4,804,117 + MPMX20_04591 0.60 +1.8 4,804,204 + MPMX20_04591 0.67 -1.3 4,804,303 - MPMX20_04591 0.74 +1.9 4,804,310 + MPMX20_04591 0.74 -0.3 4,804,328 + MPMX20_04591 0.75 +0.0 4,804,329 + MPMX20_04591 0.76 -1.4 4,804,333 + MPMX20_04591 0.76 +0.5 4,804,338 + MPMX20_04591 0.76 +0.5 4,804,383 - MPMX20_04591 0.79 +1.5 4,804,420 - MPMX20_04591 0.82 +1.5 4,804,441 + MPMX20_04591 0.84 +0.5 4,804,492 + MPMX20_04591 0.87 +0.1 4,804,593 + +0.3 4,804,616 - -0.2 4,804,729 + +0.6 4,804,737 - -0.4 4,804,749 - -0.3 4,804,749 - -0.7 4,804,794 - +0.2 4,804,804 + -0.3 4,804,837 - +1.2 4,804,845 - -2.4 4,804,855 - MPMX20_04592 0.10 +0.5 4,804,887 + MPMX20_04592 0.12 -0.5 4,804,990 + MPMX20_04592 0.20 -0.1 4,805,007 - MPMX20_04592 0.21 -2.3 4,805,070 + MPMX20_04592 0.25 +1.1 4,805,098 + MPMX20_04592 0.27 -0.2 4,805,106 + MPMX20_04592 0.28 +1.2 4,805,106 - MPMX20_04592 0.28 +0.6 4,805,106 - MPMX20_04592 0.28 +0.3 4,805,106 - MPMX20_04592 0.28 -1.4 4,805,106 - MPMX20_04592 0.28 -0.1 4,805,106 - MPMX20_04592 0.28 +0.5 4,805,140 - MPMX20_04592 0.30 +0.9 4,805,200 + MPMX20_04592 0.34 -1.5 4,805,213 + MPMX20_04592 0.35 +0.0 4,805,213 + MPMX20_04592 0.35 -0.7 4,805,214 - MPMX20_04592 0.35 -0.4 4,805,221 - MPMX20_04592 0.36 +0.1 4,805,221 - MPMX20_04592 0.36 -0.5 4,805,280 - MPMX20_04592 0.40 -1.0 4,805,294 - MPMX20_04592 0.41 +1.5 4,805,312 + MPMX20_04592 0.42 +3.0 4,805,320 - MPMX20_04592 0.43 +0.9 4,805,325 + MPMX20_04592 0.43 -0.3 4,805,338 - MPMX20_04592 0.44 -0.4 4,805,346 - MPMX20_04592 0.45 +1.0 4,805,346 - MPMX20_04592 0.45 +1.8 4,805,348 - MPMX20_04592 0.45 -1.0 4,805,368 - MPMX20_04592 0.46 -0.3 4,805,368 - MPMX20_04592 0.46 +2.5 4,805,375 + MPMX20_04592 0.47 +1.5 4,805,391 + MPMX20_04592 0.48 +0.8 4,805,446 - MPMX20_04592 0.52 +0.5 4,805,450 + MPMX20_04592 0.52 +0.1 4,805,450 + MPMX20_04592 0.52 -1.5 4,805,450 + MPMX20_04592 0.52 +1.6 4,805,451 - MPMX20_04592 0.52 +2.3 4,805,458 - MPMX20_04592 0.52 -0.5 4,805,458 - MPMX20_04592 0.52 -0.8 4,805,497 + MPMX20_04592 0.55 +0.3 4,805,497 + MPMX20_04592 0.55 +0.1 4,805,500 - MPMX20_04592 0.55 +0.3 4,805,505 - MPMX20_04592 0.56 +0.5 4,805,598 + MPMX20_04592 0.62 +2.6 4,805,606 - MPMX20_04592 0.63 +0.2 4,805,606 - MPMX20_04592 0.63 +1.5 4,805,606 - MPMX20_04592 0.63 +1.0 4,805,622 + MPMX20_04592 0.64 -0.5 4,805,626 + MPMX20_04592 0.64 +1.1 4,805,657 - MPMX20_04592 0.66 -1.1 4,805,693 + MPMX20_04592 0.69 -0.7 4,805,753 - MPMX20_04592 0.73 +0.1 4,805,773 + MPMX20_04592 0.75 -0.1 4,805,829 + MPMX20_04592 0.79 +0.6 4,805,838 - MPMX20_04592 0.79 +1.5 4,805,881 + MPMX20_04592 0.82 +1.1 4,805,919 + MPMX20_04592 0.85 +0.8 4,805,919 + MPMX20_04592 0.85 -1.7 4,805,924 + MPMX20_04592 0.85 +0.6 4,805,924 + MPMX20_04592 0.85 +1.1 4,805,924 + MPMX20_04592 0.85 -0.1 4,805,924 + MPMX20_04592 0.85 -1.3 4,805,924 + MPMX20_04592 0.85 +0.5 4,805,924 + MPMX20_04592 0.85 +1.9 4,805,924 + MPMX20_04592 0.85 +0.9 4,805,924 + MPMX20_04592 0.85 +0.6 4,805,932 - MPMX20_04592 0.86 -0.2 4,805,932 - MPMX20_04592 0.86 +0.1 4,805,937 + MPMX20_04592 0.86 -0.9 4,805,937 + MPMX20_04592 0.86 +0.2 4,806,001 + +1.5 4,806,020 + +2.5 4,806,039 + +0.5 4,806,093 + +0.5 4,806,093 + +0.2 4,806,121 - +0.0 4,806,143 - +2.0 4,806,203 - +1.0 4,806,227 + +1.0 4,806,241 - -1.9 4,806,242 + -0.5 4,806,250 + +1.6 4,806,250 - +1.5 4,806,290 + MPMX20_04593 0.12 +0.1 4,806,298 - MPMX20_04593 0.13 +0.5 4,806,311 - MPMX20_04593 0.15 +1.5 4,806,318 + MPMX20_04593 0.16 -0.3 4,806,320 + MPMX20_04593 0.16 -1.1 4,806,321 - MPMX20_04593 0.16 +0.7 4,806,326 - MPMX20_04593 0.17 +0.1 4,806,326 - MPMX20_04593 0.17 +0.7 4,806,359 + MPMX20_04593 0.22 +1.2 4,806,367 - MPMX20_04593 0.23 -1.0 4,806,369 - MPMX20_04593 0.23 +0.2 4,806,378 + MPMX20_04593 0.25 +2.5 4,806,378 + MPMX20_04593 0.25 +1.9 4,806,386 - MPMX20_04593 0.26 -0.1 4,806,386 - MPMX20_04593 0.26 -0.3 4,806,393 + MPMX20_04593 0.27 +1.5 4,806,402 + MPMX20_04593 0.28 +0.0 4,806,402 + MPMX20_04593 0.28 -0.3 4,806,402 + MPMX20_04593 0.28 -0.1 4,806,403 + MPMX20_04593 0.28 -0.9 4,806,410 - MPMX20_04593 0.29 +0.1 4,806,410 - MPMX20_04593 0.29 -1.6 4,806,422 - MPMX20_04593 0.31 -0.9 4,806,483 - MPMX20_04593 0.40 -0.5 4,806,504 - MPMX20_04593 0.43 +0.4 4,806,555 + MPMX20_04593 0.50 -1.0 4,806,555 + MPMX20_04593 0.50 -0.1 4,806,555 + MPMX20_04593 0.50 -0.5 4,806,555 + MPMX20_04593 0.50 +0.0 4,806,555 + MPMX20_04593 0.50 +0.5 4,806,563 - MPMX20_04593 0.52 +1.5 4,806,563 - MPMX20_04593 0.52 -0.3 4,806,563 - MPMX20_04593 0.52 -0.6 4,806,563 - MPMX20_04593 0.52 -1.1 4,806,611 - MPMX20_04593 0.59 +2.5 4,806,615 - MPMX20_04593 0.59 -0.6 4,806,693 + MPMX20_04593 0.70 -0.4 4,806,701 - MPMX20_04593 0.72 -1.9 4,806,757 - MPMX20_04593 0.80 +1.0 4,806,757 - MPMX20_04593 0.80 +0.6 4,806,813 - MPMX20_04593 0.88 -2.7 4,806,834 + +0.5 4,806,834 + -0.9 4,806,842 + -0.0 4,806,842 + +1.5 4,806,875 + +0.9 4,806,875 + -0.3 4,806,875 + -1.1 4,806,875 + +0.2 4,806,875 + -1.3 4,806,875 + -1.7 4,806,875 + -0.8 4,806,883 - -0.2 4,806,883 - -0.5 4,806,883 - -0.1 4,806,883 - +0.5 4,806,883 - -1.3 4,806,883 - -1.4 4,806,883 - -1.0 4,806,883 - +1.1 4,806,883 - +0.5 4,806,883 - +0.2 4,806,951 + -1.0 4,806,953 - -0.3 4,807,072 - -0.1
Or see this region's nucleotide sequence