Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02251

Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02250 and MPMX20_02251 are separated by 24 nucleotidesMPMX20_02251 and MPMX20_02252 overlap by 1 nucleotides MPMX20_02250: MPMX20_02250 - Aliphatic amidase expression-regulating protein, at 2,362,237 to 2,363,508 _02250 MPMX20_02251: MPMX20_02251 - hypothetical protein, at 2,363,533 to 2,365,107 _02251 MPMX20_02252: MPMX20_02252 - hypothetical protein, at 2,365,107 to 2,366,180 _02252 Position (kb) 2363 2364 2365 2366Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8 9at 2362.550 kb on + strand, within MPMX20_02250at 2362.556 kb on + strand, within MPMX20_02250at 2362.594 kb on - strand, within MPMX20_02250at 2362.611 kb on + strand, within MPMX20_02250at 2362.611 kb on + strand, within MPMX20_02250at 2362.619 kb on - strand, within MPMX20_02250at 2362.619 kb on - strand, within MPMX20_02250at 2362.626 kb on + strand, within MPMX20_02250at 2362.634 kb on - strand, within MPMX20_02250at 2362.634 kb on - strand, within MPMX20_02250at 2362.634 kb on - strand, within MPMX20_02250at 2362.634 kb on - strand, within MPMX20_02250at 2362.634 kb on - strand, within MPMX20_02250at 2362.641 kb on + strand, within MPMX20_02250at 2362.646 kb on + strand, within MPMX20_02250at 2362.720 kb on + strand, within MPMX20_02250at 2362.728 kb on - strand, within MPMX20_02250at 2362.842 kb on + strand, within MPMX20_02250at 2362.842 kb on + strand, within MPMX20_02250at 2362.850 kb on - strand, within MPMX20_02250at 2362.850 kb on - strand, within MPMX20_02250at 2362.850 kb on - strand, within MPMX20_02250at 2362.887 kb on - strand, within MPMX20_02250at 2362.914 kb on - strand, within MPMX20_02250at 2363.016 kb on - strand, within MPMX20_02250at 2363.040 kb on + strand, within MPMX20_02250at 2363.059 kb on - strand, within MPMX20_02250at 2363.143 kb on + strand, within MPMX20_02250at 2363.143 kb on + strand, within MPMX20_02250at 2363.151 kb on - strand, within MPMX20_02250at 2363.234 kb on - strand, within MPMX20_02250at 2363.328 kb on + strand, within MPMX20_02250at 2363.405 kb on - strandat 2363.439 kb on + strandat 2363.447 kb on - strandat 2363.447 kb on - strandat 2363.447 kb on - strandat 2363.447 kb on - strandat 2363.522 kb on + strandat 2363.580 kb on + strandat 2363.669 kb on - strandat 2363.671 kb on - strandat 2363.697 kb on + strand, within MPMX20_02251at 2363.803 kb on + strand, within MPMX20_02251at 2363.803 kb on + strand, within MPMX20_02251at 2363.816 kb on - strand, within MPMX20_02251at 2363.821 kb on + strand, within MPMX20_02251at 2364.073 kb on - strand, within MPMX20_02251at 2364.073 kb on - strand, within MPMX20_02251at 2364.176 kb on + strand, within MPMX20_02251at 2364.254 kb on - strand, within MPMX20_02251at 2364.256 kb on - strand, within MPMX20_02251at 2364.256 kb on - strand, within MPMX20_02251at 2364.276 kb on - strand, within MPMX20_02251at 2364.361 kb on - strand, within MPMX20_02251at 2364.394 kb on - strand, within MPMX20_02251at 2364.402 kb on + strand, within MPMX20_02251at 2364.407 kb on + strand, within MPMX20_02251at 2364.450 kb on + strand, within MPMX20_02251at 2364.606 kb on + strand, within MPMX20_02251at 2364.614 kb on - strand, within MPMX20_02251at 2364.676 kb on - strand, within MPMX20_02251at 2364.676 kb on - strand, within MPMX20_02251at 2364.719 kb on + strand, within MPMX20_02251at 2364.806 kb on + strand, within MPMX20_02251at 2364.814 kb on - strand, within MPMX20_02251at 2364.872 kb on + strand, within MPMX20_02251at 2364.880 kb on - strand, within MPMX20_02251at 2364.880 kb on - strand, within MPMX20_02251at 2364.882 kb on + strand, within MPMX20_02251at 2364.888 kb on + strand, within MPMX20_02251at 2364.896 kb on - strand, within MPMX20_02251at 2364.896 kb on - strand, within MPMX20_02251at 2364.896 kb on - strand, within MPMX20_02251at 2365.040 kb on + strandat 2365.079 kb on - strandat 2365.080 kb on - strandat 2365.123 kb on + strandat 2365.123 kb on + strandat 2365.131 kb on - strandat 2365.131 kb on - strandat 2365.176 kb on + strandat 2365.319 kb on - strand, within MPMX20_02252at 2365.447 kb on - strand, within MPMX20_02252at 2365.462 kb on - strand, within MPMX20_02252at 2365.473 kb on - strand, within MPMX20_02252at 2365.494 kb on - strand, within MPMX20_02252at 2365.551 kb on - strand, within MPMX20_02252at 2365.596 kb on + strand, within MPMX20_02252at 2365.722 kb on - strand, within MPMX20_02252at 2365.732 kb on - strand, within MPMX20_02252at 2365.732 kb on - strand, within MPMX20_02252at 2365.760 kb on + strand, within MPMX20_02252at 2365.882 kb on - strand, within MPMX20_02252at 2365.910 kb on - strand, within MPMX20_02252at 2365.915 kb on - strand, within MPMX20_02252at 2365.926 kb on - strand, within MPMX20_02252at 2365.964 kb on + strand, within MPMX20_02252at 2366.004 kb on - strand, within MPMX20_02252at 2366.045 kb on + strand, within MPMX20_02252

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,362,550 + MPMX20_02250 0.25 +0.4
2,362,556 + MPMX20_02250 0.25 -1.2
2,362,594 - MPMX20_02250 0.28 +0.4
2,362,611 + MPMX20_02250 0.29 -1.0
2,362,611 + MPMX20_02250 0.29 -1.3
2,362,619 - MPMX20_02250 0.30 -0.7
2,362,619 - MPMX20_02250 0.30 -0.7
2,362,626 + MPMX20_02250 0.31 +0.8
2,362,634 - MPMX20_02250 0.31 -0.2
2,362,634 - MPMX20_02250 0.31 -0.5
2,362,634 - MPMX20_02250 0.31 -0.6
2,362,634 - MPMX20_02250 0.31 +0.3
2,362,634 - MPMX20_02250 0.31 +0.6
2,362,641 + MPMX20_02250 0.32 +0.2
2,362,646 + MPMX20_02250 0.32 +0.1
2,362,720 + MPMX20_02250 0.38 -0.8
2,362,728 - MPMX20_02250 0.39 -0.3
2,362,842 + MPMX20_02250 0.48 -1.8
2,362,842 + MPMX20_02250 0.48 -0.9
2,362,850 - MPMX20_02250 0.48 -0.7
2,362,850 - MPMX20_02250 0.48 -0.9
2,362,850 - MPMX20_02250 0.48 +0.6
2,362,887 - MPMX20_02250 0.51 -0.1
2,362,914 - MPMX20_02250 0.53 -0.3
2,363,016 - MPMX20_02250 0.61 -0.5
2,363,040 + MPMX20_02250 0.63 -0.6
2,363,059 - MPMX20_02250 0.65 -0.9
2,363,143 + MPMX20_02250 0.71 +0.3
2,363,143 + MPMX20_02250 0.71 -0.5
2,363,151 - MPMX20_02250 0.72 -0.5
2,363,234 - MPMX20_02250 0.78 +1.8
2,363,328 + MPMX20_02250 0.86 -0.7
2,363,405 - -0.2
2,363,439 + -0.7
2,363,447 - +1.0
2,363,447 - -0.0
2,363,447 - +0.5
2,363,447 - +0.0
2,363,522 + -0.7
2,363,580 + -0.1
2,363,669 - -1.1
2,363,671 - +0.9
2,363,697 + MPMX20_02251 0.10 +0.0
2,363,803 + MPMX20_02251 0.17 -0.6
2,363,803 + MPMX20_02251 0.17 +0.4
2,363,816 - MPMX20_02251 0.18 -0.5
2,363,821 + MPMX20_02251 0.18 +0.5
2,364,073 - MPMX20_02251 0.34 -0.5
2,364,073 - MPMX20_02251 0.34 -0.4
2,364,176 + MPMX20_02251 0.41 -1.4
2,364,254 - MPMX20_02251 0.46 +3.0
2,364,256 - MPMX20_02251 0.46 -0.5
2,364,256 - MPMX20_02251 0.46 -0.1
2,364,276 - MPMX20_02251 0.47 -0.3
2,364,361 - MPMX20_02251 0.53 +1.1
2,364,394 - MPMX20_02251 0.55 +0.2
2,364,402 + MPMX20_02251 0.55 +0.3
2,364,407 + MPMX20_02251 0.55 +1.1
2,364,450 + MPMX20_02251 0.58 +1.3
2,364,606 + MPMX20_02251 0.68 -1.5
2,364,614 - MPMX20_02251 0.69 +1.0
2,364,676 - MPMX20_02251 0.73 +1.9
2,364,676 - MPMX20_02251 0.73 -1.1
2,364,719 + MPMX20_02251 0.75 +1.9
2,364,806 + MPMX20_02251 0.81 +0.9
2,364,814 - MPMX20_02251 0.81 -0.8
2,364,872 + MPMX20_02251 0.85 -0.7
2,364,880 - MPMX20_02251 0.86 +0.6
2,364,880 - MPMX20_02251 0.86 +0.7
2,364,882 + MPMX20_02251 0.86 +0.3
2,364,888 + MPMX20_02251 0.86 -0.1
2,364,896 - MPMX20_02251 0.87 +9.3
2,364,896 - MPMX20_02251 0.87 -0.1
2,364,896 - MPMX20_02251 0.87 +1.9
2,365,040 + -0.6
2,365,079 - +0.0
2,365,080 - -2.5
2,365,123 + +0.0
2,365,123 + +0.0
2,365,131 - -1.9
2,365,131 - -0.9
2,365,176 + -0.3
2,365,319 - MPMX20_02252 0.20 -0.2
2,365,447 - MPMX20_02252 0.32 +1.0
2,365,462 - MPMX20_02252 0.33 -0.3
2,365,473 - MPMX20_02252 0.34 +7.7
2,365,494 - MPMX20_02252 0.36 +0.3
2,365,551 - MPMX20_02252 0.41 -0.6
2,365,596 + MPMX20_02252 0.46 +0.2
2,365,722 - MPMX20_02252 0.57 -0.5
2,365,732 - MPMX20_02252 0.58 -0.9
2,365,732 - MPMX20_02252 0.58 -0.6
2,365,760 + MPMX20_02252 0.61 +1.2
2,365,882 - MPMX20_02252 0.72 -0.6
2,365,910 - MPMX20_02252 0.75 -2.4
2,365,915 - MPMX20_02252 0.75 -1.1
2,365,926 - MPMX20_02252 0.76 -2.4
2,365,964 + MPMX20_02252 0.80 -1.2
2,366,004 - MPMX20_02252 0.84 -1.2
2,366,045 + MPMX20_02252 0.87 -0.2

Or see this region's nucleotide sequence