Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02250 and MPMX20_02251 are separated by 24 nucleotides MPMX20_02251 and MPMX20_02252 overlap by 1 nucleotides
MPMX20_02250: MPMX20_02250 - Aliphatic amidase expression-regulating protein, at 2,362,237 to 2,363,508
_02250
MPMX20_02251: MPMX20_02251 - hypothetical protein, at 2,363,533 to 2,365,107
_02251
MPMX20_02252: MPMX20_02252 - hypothetical protein, at 2,365,107 to 2,366,180
_02252
Position (kb)
2363
2364
2365
2366 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8
9 at 2362.550 kb on + strand, within MPMX20_02250 at 2362.556 kb on + strand, within MPMX20_02250 at 2362.594 kb on - strand, within MPMX20_02250 at 2362.611 kb on + strand, within MPMX20_02250 at 2362.611 kb on + strand, within MPMX20_02250 at 2362.619 kb on - strand, within MPMX20_02250 at 2362.619 kb on - strand, within MPMX20_02250 at 2362.626 kb on + strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.641 kb on + strand, within MPMX20_02250 at 2362.646 kb on + strand, within MPMX20_02250 at 2362.720 kb on + strand, within MPMX20_02250 at 2362.728 kb on - strand, within MPMX20_02250 at 2362.842 kb on + strand, within MPMX20_02250 at 2362.842 kb on + strand, within MPMX20_02250 at 2362.850 kb on - strand, within MPMX20_02250 at 2362.850 kb on - strand, within MPMX20_02250 at 2362.850 kb on - strand, within MPMX20_02250 at 2362.887 kb on - strand, within MPMX20_02250 at 2362.914 kb on - strand, within MPMX20_02250 at 2363.016 kb on - strand, within MPMX20_02250 at 2363.040 kb on + strand, within MPMX20_02250 at 2363.059 kb on - strand, within MPMX20_02250 at 2363.143 kb on + strand, within MPMX20_02250 at 2363.143 kb on + strand, within MPMX20_02250 at 2363.151 kb on - strand, within MPMX20_02250 at 2363.234 kb on - strand, within MPMX20_02250 at 2363.328 kb on + strand, within MPMX20_02250 at 2363.405 kb on - strand at 2363.439 kb on + strand at 2363.447 kb on - strand at 2363.447 kb on - strand at 2363.447 kb on - strand at 2363.447 kb on - strand at 2363.522 kb on + strand at 2363.580 kb on + strand at 2363.669 kb on - strand at 2363.671 kb on - strand at 2363.697 kb on + strand, within MPMX20_02251 at 2363.803 kb on + strand, within MPMX20_02251 at 2363.803 kb on + strand, within MPMX20_02251 at 2363.816 kb on - strand, within MPMX20_02251 at 2363.821 kb on + strand, within MPMX20_02251 at 2364.073 kb on - strand, within MPMX20_02251 at 2364.073 kb on - strand, within MPMX20_02251 at 2364.176 kb on + strand, within MPMX20_02251 at 2364.254 kb on - strand, within MPMX20_02251 at 2364.256 kb on - strand, within MPMX20_02251 at 2364.256 kb on - strand, within MPMX20_02251 at 2364.276 kb on - strand, within MPMX20_02251 at 2364.361 kb on - strand, within MPMX20_02251 at 2364.394 kb on - strand, within MPMX20_02251 at 2364.402 kb on + strand, within MPMX20_02251 at 2364.407 kb on + strand, within MPMX20_02251 at 2364.450 kb on + strand, within MPMX20_02251 at 2364.606 kb on + strand, within MPMX20_02251 at 2364.614 kb on - strand, within MPMX20_02251 at 2364.676 kb on - strand, within MPMX20_02251 at 2364.676 kb on - strand, within MPMX20_02251 at 2364.719 kb on + strand, within MPMX20_02251 at 2364.806 kb on + strand, within MPMX20_02251 at 2364.814 kb on - strand, within MPMX20_02251 at 2364.872 kb on + strand, within MPMX20_02251 at 2364.880 kb on - strand, within MPMX20_02251 at 2364.880 kb on - strand, within MPMX20_02251 at 2364.882 kb on + strand, within MPMX20_02251 at 2364.888 kb on + strand, within MPMX20_02251 at 2364.896 kb on - strand, within MPMX20_02251 at 2364.896 kb on - strand, within MPMX20_02251 at 2364.896 kb on - strand, within MPMX20_02251 at 2365.040 kb on + strand at 2365.079 kb on - strand at 2365.080 kb on - strand at 2365.123 kb on + strand at 2365.123 kb on + strand at 2365.131 kb on - strand at 2365.131 kb on - strand at 2365.176 kb on + strand at 2365.319 kb on - strand, within MPMX20_02252 at 2365.447 kb on - strand, within MPMX20_02252 at 2365.462 kb on - strand, within MPMX20_02252 at 2365.473 kb on - strand, within MPMX20_02252 at 2365.494 kb on - strand, within MPMX20_02252 at 2365.551 kb on - strand, within MPMX20_02252 at 2365.596 kb on + strand, within MPMX20_02252 at 2365.722 kb on - strand, within MPMX20_02252 at 2365.732 kb on - strand, within MPMX20_02252 at 2365.732 kb on - strand, within MPMX20_02252 at 2365.760 kb on + strand, within MPMX20_02252 at 2365.882 kb on - strand, within MPMX20_02252 at 2365.910 kb on - strand, within MPMX20_02252 at 2365.915 kb on - strand, within MPMX20_02252 at 2365.926 kb on - strand, within MPMX20_02252 at 2365.964 kb on + strand, within MPMX20_02252 at 2366.004 kb on - strand, within MPMX20_02252 at 2366.045 kb on + strand, within MPMX20_02252
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,362,550 + MPMX20_02250 0.25 +0.4 2,362,556 + MPMX20_02250 0.25 -1.2 2,362,594 - MPMX20_02250 0.28 +0.4 2,362,611 + MPMX20_02250 0.29 -1.0 2,362,611 + MPMX20_02250 0.29 -1.3 2,362,619 - MPMX20_02250 0.30 -0.7 2,362,619 - MPMX20_02250 0.30 -0.7 2,362,626 + MPMX20_02250 0.31 +0.8 2,362,634 - MPMX20_02250 0.31 -0.2 2,362,634 - MPMX20_02250 0.31 -0.5 2,362,634 - MPMX20_02250 0.31 -0.6 2,362,634 - MPMX20_02250 0.31 +0.3 2,362,634 - MPMX20_02250 0.31 +0.6 2,362,641 + MPMX20_02250 0.32 +0.2 2,362,646 + MPMX20_02250 0.32 +0.1 2,362,720 + MPMX20_02250 0.38 -0.8 2,362,728 - MPMX20_02250 0.39 -0.3 2,362,842 + MPMX20_02250 0.48 -1.8 2,362,842 + MPMX20_02250 0.48 -0.9 2,362,850 - MPMX20_02250 0.48 -0.7 2,362,850 - MPMX20_02250 0.48 -0.9 2,362,850 - MPMX20_02250 0.48 +0.6 2,362,887 - MPMX20_02250 0.51 -0.1 2,362,914 - MPMX20_02250 0.53 -0.3 2,363,016 - MPMX20_02250 0.61 -0.5 2,363,040 + MPMX20_02250 0.63 -0.6 2,363,059 - MPMX20_02250 0.65 -0.9 2,363,143 + MPMX20_02250 0.71 +0.3 2,363,143 + MPMX20_02250 0.71 -0.5 2,363,151 - MPMX20_02250 0.72 -0.5 2,363,234 - MPMX20_02250 0.78 +1.8 2,363,328 + MPMX20_02250 0.86 -0.7 2,363,405 - -0.2 2,363,439 + -0.7 2,363,447 - +1.0 2,363,447 - -0.0 2,363,447 - +0.5 2,363,447 - +0.0 2,363,522 + -0.7 2,363,580 + -0.1 2,363,669 - -1.1 2,363,671 - +0.9 2,363,697 + MPMX20_02251 0.10 +0.0 2,363,803 + MPMX20_02251 0.17 -0.6 2,363,803 + MPMX20_02251 0.17 +0.4 2,363,816 - MPMX20_02251 0.18 -0.5 2,363,821 + MPMX20_02251 0.18 +0.5 2,364,073 - MPMX20_02251 0.34 -0.5 2,364,073 - MPMX20_02251 0.34 -0.4 2,364,176 + MPMX20_02251 0.41 -1.4 2,364,254 - MPMX20_02251 0.46 +3.0 2,364,256 - MPMX20_02251 0.46 -0.5 2,364,256 - MPMX20_02251 0.46 -0.1 2,364,276 - MPMX20_02251 0.47 -0.3 2,364,361 - MPMX20_02251 0.53 +1.1 2,364,394 - MPMX20_02251 0.55 +0.2 2,364,402 + MPMX20_02251 0.55 +0.3 2,364,407 + MPMX20_02251 0.55 +1.1 2,364,450 + MPMX20_02251 0.58 +1.3 2,364,606 + MPMX20_02251 0.68 -1.5 2,364,614 - MPMX20_02251 0.69 +1.0 2,364,676 - MPMX20_02251 0.73 +1.9 2,364,676 - MPMX20_02251 0.73 -1.1 2,364,719 + MPMX20_02251 0.75 +1.9 2,364,806 + MPMX20_02251 0.81 +0.9 2,364,814 - MPMX20_02251 0.81 -0.8 2,364,872 + MPMX20_02251 0.85 -0.7 2,364,880 - MPMX20_02251 0.86 +0.6 2,364,880 - MPMX20_02251 0.86 +0.7 2,364,882 + MPMX20_02251 0.86 +0.3 2,364,888 + MPMX20_02251 0.86 -0.1 2,364,896 - MPMX20_02251 0.87 +9.3 2,364,896 - MPMX20_02251 0.87 -0.1 2,364,896 - MPMX20_02251 0.87 +1.9 2,365,040 + -0.6 2,365,079 - +0.0 2,365,080 - -2.5 2,365,123 + +0.0 2,365,123 + +0.0 2,365,131 - -1.9 2,365,131 - -0.9 2,365,176 + -0.3 2,365,319 - MPMX20_02252 0.20 -0.2 2,365,447 - MPMX20_02252 0.32 +1.0 2,365,462 - MPMX20_02252 0.33 -0.3 2,365,473 - MPMX20_02252 0.34 +7.7 2,365,494 - MPMX20_02252 0.36 +0.3 2,365,551 - MPMX20_02252 0.41 -0.6 2,365,596 + MPMX20_02252 0.46 +0.2 2,365,722 - MPMX20_02252 0.57 -0.5 2,365,732 - MPMX20_02252 0.58 -0.9 2,365,732 - MPMX20_02252 0.58 -0.6 2,365,760 + MPMX20_02252 0.61 +1.2 2,365,882 - MPMX20_02252 0.72 -0.6 2,365,910 - MPMX20_02252 0.75 -2.4 2,365,915 - MPMX20_02252 0.75 -1.1 2,365,926 - MPMX20_02252 0.76 -2.4 2,365,964 + MPMX20_02252 0.80 -1.2 2,366,004 - MPMX20_02252 0.84 -1.2 2,366,045 + MPMX20_02252 0.87 -0.2
Or see this region's nucleotide sequence