Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00249

Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00247 and MPMX20_00248 are separated by 132 nucleotidesMPMX20_00248 and MPMX20_00249 are separated by 96 nucleotidesMPMX20_00249 and MPMX20_00250 are separated by 14 nucleotides MPMX20_00247: MPMX20_00247 - hypothetical protein, at 264,202 to 264,714 _00247 MPMX20_00248: MPMX20_00248 - Protein PsiE, at 264,847 to 265,257 _00248 MPMX20_00249: MPMX20_00249 - Maltose/maltodextrin transport system permease protein MalG, at 265,354 to 266,244 _00249 MPMX20_00250: MPMX20_00250 - Maltose/maltodextrin transport system permease protein MalF, at 266,259 to 267,803 _00250 Position (kb) 265 266 267Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 264.375 kb on - strand, within MPMX20_00247at 264.378 kb on - strand, within MPMX20_00247at 264.395 kb on + strand, within MPMX20_00247at 264.395 kb on + strand, within MPMX20_00247at 264.395 kb on + strand, within MPMX20_00247at 264.403 kb on - strand, within MPMX20_00247at 264.451 kb on + strand, within MPMX20_00247at 264.507 kb on - strand, within MPMX20_00247at 264.536 kb on + strand, within MPMX20_00247at 264.536 kb on + strand, within MPMX20_00247at 264.546 kb on + strand, within MPMX20_00247at 264.546 kb on + strand, within MPMX20_00247at 264.554 kb on - strand, within MPMX20_00247at 264.568 kb on - strand, within MPMX20_00247at 264.682 kb on + strandat 264.682 kb on + strandat 264.703 kb on + strandat 264.728 kb on + strandat 264.825 kb on + strandat 264.853 kb on + strandat 264.865 kb on - strandat 264.882 kb on - strandat 264.891 kb on + strand, within MPMX20_00248at 264.899 kb on - strand, within MPMX20_00248at 264.899 kb on - strand, within MPMX20_00248at 264.899 kb on - strand, within MPMX20_00248at 264.899 kb on - strand, within MPMX20_00248at 264.901 kb on + strand, within MPMX20_00248at 264.908 kb on + strand, within MPMX20_00248at 264.923 kb on + strand, within MPMX20_00248at 264.923 kb on + strand, within MPMX20_00248at 264.923 kb on + strand, within MPMX20_00248at 264.926 kb on - strand, within MPMX20_00248at 264.929 kb on + strand, within MPMX20_00248at 264.931 kb on - strand, within MPMX20_00248at 264.931 kb on - strand, within MPMX20_00248at 264.931 kb on - strand, within MPMX20_00248at 264.979 kb on + strand, within MPMX20_00248at 265.007 kb on + strand, within MPMX20_00248at 265.007 kb on + strand, within MPMX20_00248at 265.007 kb on + strand, within MPMX20_00248at 265.017 kb on + strand, within MPMX20_00248at 265.025 kb on - strand, within MPMX20_00248at 265.030 kb on + strand, within MPMX20_00248at 265.040 kb on - strand, within MPMX20_00248at 265.087 kb on + strand, within MPMX20_00248at 265.099 kb on + strand, within MPMX20_00248at 265.156 kb on + strand, within MPMX20_00248at 265.156 kb on + strand, within MPMX20_00248at 265.156 kb on + strand, within MPMX20_00248at 265.164 kb on - strand, within MPMX20_00248at 265.177 kb on + strand, within MPMX20_00248at 265.185 kb on - strand, within MPMX20_00248at 265.185 kb on - strand, within MPMX20_00248at 265.203 kb on + strand, within MPMX20_00248at 265.217 kb on + strandat 265.217 kb on + strandat 265.217 kb on + strandat 265.225 kb on - strandat 265.225 kb on - strandat 265.242 kb on + strandat 265.268 kb on + strandat 265.280 kb on + strandat 265.288 kb on - strandat 265.288 kb on - strandat 265.301 kb on + strandat 265.315 kb on + strandat 265.404 kb on - strandat 265.421 kb on + strandat 265.482 kb on + strand, within MPMX20_00249at 265.494 kb on + strand, within MPMX20_00249at 265.512 kb on + strand, within MPMX20_00249at 265.512 kb on + strand, within MPMX20_00249at 265.512 kb on + strand, within MPMX20_00249at 265.520 kb on - strand, within MPMX20_00249at 265.542 kb on - strand, within MPMX20_00249at 265.663 kb on - strand, within MPMX20_00249at 265.718 kb on + strand, within MPMX20_00249at 265.718 kb on + strand, within MPMX20_00249at 265.796 kb on + strand, within MPMX20_00249at 265.847 kb on + strand, within MPMX20_00249at 265.874 kb on + strand, within MPMX20_00249at 265.882 kb on - strand, within MPMX20_00249at 265.882 kb on - strand, within MPMX20_00249at 265.891 kb on - strand, within MPMX20_00249at 265.918 kb on + strand, within MPMX20_00249at 265.920 kb on + strand, within MPMX20_00249at 265.931 kb on + strand, within MPMX20_00249at 265.939 kb on - strand, within MPMX20_00249at 265.999 kb on - strand, within MPMX20_00249at 266.081 kb on - strand, within MPMX20_00249at 266.196 kb on - strandat 266.196 kb on - strandat 266.240 kb on + strandat 266.248 kb on - strandat 266.248 kb on - strandat 266.281 kb on + strandat 266.281 kb on + strandat 266.321 kb on + strandat 266.416 kb on - strand, within MPMX20_00250at 266.581 kb on + strand, within MPMX20_00250at 266.636 kb on - strand, within MPMX20_00250at 266.676 kb on - strand, within MPMX20_00250at 266.737 kb on - strand, within MPMX20_00250at 266.746 kb on + strand, within MPMX20_00250at 266.827 kb on + strand, within MPMX20_00250at 266.827 kb on + strand, within MPMX20_00250at 266.827 kb on + strand, within MPMX20_00250at 266.827 kb on + strand, within MPMX20_00250at 266.827 kb on + strand, within MPMX20_00250at 266.853 kb on + strand, within MPMX20_00250at 266.859 kb on - strand, within MPMX20_00250at 266.885 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.903 kb on - strand, within MPMX20_00250at 266.903 kb on - strand, within MPMX20_00250at 266.903 kb on - strand, within MPMX20_00250at 266.903 kb on - strand, within MPMX20_00250at 267.037 kb on + strand, within MPMX20_00250at 267.037 kb on + strand, within MPMX20_00250at 267.037 kb on + strand, within MPMX20_00250at 267.045 kb on - strand, within MPMX20_00250at 267.122 kb on + strand, within MPMX20_00250at 267.122 kb on + strand, within MPMX20_00250at 267.122 kb on + strand, within MPMX20_00250at 267.130 kb on - strand, within MPMX20_00250at 267.130 kb on - strand, within MPMX20_00250at 267.130 kb on - strand, within MPMX20_00250at 267.130 kb on - strand, within MPMX20_00250at 267.211 kb on - strand, within MPMX20_00250

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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264,375 - MPMX20_00247 0.34 -0.8
264,378 - MPMX20_00247 0.34 +1.5
264,395 + MPMX20_00247 0.38 +0.8
264,395 + MPMX20_00247 0.38 +1.4
264,395 + MPMX20_00247 0.38 -0.4
264,403 - MPMX20_00247 0.39 +0.7
264,451 + MPMX20_00247 0.49 +0.6
264,507 - MPMX20_00247 0.59 +2.4
264,536 + MPMX20_00247 0.65 -0.7
264,536 + MPMX20_00247 0.65 +0.7
264,546 + MPMX20_00247 0.67 -1.8
264,546 + MPMX20_00247 0.67 +1.4
264,554 - MPMX20_00247 0.69 -1.4
264,568 - MPMX20_00247 0.71 +0.4
264,682 + +2.0
264,682 + +0.9
264,703 + -0.4
264,728 + +0.4
264,825 + +0.4
264,853 + +0.4
264,865 - +0.2
264,882 - -0.6
264,891 + MPMX20_00248 0.11 -1.3
264,899 - MPMX20_00248 0.13 +0.4
264,899 - MPMX20_00248 0.13 +0.1
264,899 - MPMX20_00248 0.13 -1.5
264,899 - MPMX20_00248 0.13 -0.6
264,901 + MPMX20_00248 0.13 +0.7
264,908 + MPMX20_00248 0.15 -0.3
264,923 + MPMX20_00248 0.18 -0.3
264,923 + MPMX20_00248 0.18 +0.1
264,923 + MPMX20_00248 0.18 +0.0
264,926 - MPMX20_00248 0.19 -0.5
264,929 + MPMX20_00248 0.20 +2.0
264,931 - MPMX20_00248 0.20 +0.1
264,931 - MPMX20_00248 0.20 -1.4
264,931 - MPMX20_00248 0.20 +1.1
264,979 + MPMX20_00248 0.32 +0.4
265,007 + MPMX20_00248 0.39 -1.0
265,007 + MPMX20_00248 0.39 -0.9
265,007 + MPMX20_00248 0.39 -1.0
265,017 + MPMX20_00248 0.41 +0.4
265,025 - MPMX20_00248 0.43 -1.9
265,030 + MPMX20_00248 0.45 -0.8
265,040 - MPMX20_00248 0.47 -0.3
265,087 + MPMX20_00248 0.58 +0.0
265,099 + MPMX20_00248 0.61 -0.4
265,156 + MPMX20_00248 0.75 -0.7
265,156 + MPMX20_00248 0.75 -0.6
265,156 + MPMX20_00248 0.75 -0.4
265,164 - MPMX20_00248 0.77 -0.8
265,177 + MPMX20_00248 0.80 -0.5
265,185 - MPMX20_00248 0.82 -1.6
265,185 - MPMX20_00248 0.82 -1.6
265,203 + MPMX20_00248 0.87 +1.4
265,217 + +0.0
265,217 + -0.9
265,217 + -0.8
265,225 - -0.0
265,225 - -1.2
265,242 + +0.8
265,268 + -1.6
265,280 + -0.3
265,288 - +0.4
265,288 - -0.3
265,301 + +0.3
265,315 + -1.6
265,404 - +0.1
265,421 + +1.4
265,482 + MPMX20_00249 0.14 -1.2
265,494 + MPMX20_00249 0.16 -0.8
265,512 + MPMX20_00249 0.18 -0.2
265,512 + MPMX20_00249 0.18 +2.2
265,512 + MPMX20_00249 0.18 -0.2
265,520 - MPMX20_00249 0.19 +1.1
265,542 - MPMX20_00249 0.21 +1.4
265,663 - MPMX20_00249 0.35 -1.1
265,718 + MPMX20_00249 0.41 -0.4
265,718 + MPMX20_00249 0.41 -0.4
265,796 + MPMX20_00249 0.50 -1.0
265,847 + MPMX20_00249 0.55 -0.6
265,874 + MPMX20_00249 0.58 +1.0
265,882 - MPMX20_00249 0.59 +0.4
265,882 - MPMX20_00249 0.59 +0.4
265,891 - MPMX20_00249 0.60 +0.7
265,918 + MPMX20_00249 0.63 -0.1
265,920 + MPMX20_00249 0.64 +0.4
265,931 + MPMX20_00249 0.65 +0.4
265,939 - MPMX20_00249 0.66 -1.0
265,999 - MPMX20_00249 0.72 +0.2
266,081 - MPMX20_00249 0.82 +0.8
266,196 - -1.3
266,196 - -1.3
266,240 + -1.2
266,248 - +1.2
266,248 - -0.4
266,281 + -0.7
266,281 + -0.2
266,321 + -0.8
266,416 - MPMX20_00250 0.10 -0.4
266,581 + MPMX20_00250 0.21 -0.7
266,636 - MPMX20_00250 0.24 -1.1
266,676 - MPMX20_00250 0.27 -1.1
266,737 - MPMX20_00250 0.31 +1.1
266,746 + MPMX20_00250 0.32 -0.8
266,827 + MPMX20_00250 0.37 -0.5
266,827 + MPMX20_00250 0.37 -2.2
266,827 + MPMX20_00250 0.37 -0.5
266,827 + MPMX20_00250 0.37 -1.2
266,827 + MPMX20_00250 0.37 -3.9
266,853 + MPMX20_00250 0.38 -0.8
266,859 - MPMX20_00250 0.39 -0.6
266,885 + MPMX20_00250 0.41 -0.6
266,895 + MPMX20_00250 0.41 +0.2
266,895 + MPMX20_00250 0.41 +0.4
266,895 + MPMX20_00250 0.41 -0.2
266,895 + MPMX20_00250 0.41 -0.6
266,895 + MPMX20_00250 0.41 -2.6
266,903 - MPMX20_00250 0.42 -0.3
266,903 - MPMX20_00250 0.42 -0.6
266,903 - MPMX20_00250 0.42 -0.1
266,903 - MPMX20_00250 0.42 +0.4
267,037 + MPMX20_00250 0.50 -0.9
267,037 + MPMX20_00250 0.50 -1.2
267,037 + MPMX20_00250 0.50 -1.2
267,045 - MPMX20_00250 0.51 +0.2
267,122 + MPMX20_00250 0.56 -1.2
267,122 + MPMX20_00250 0.56 +0.4
267,122 + MPMX20_00250 0.56 -1.6
267,130 - MPMX20_00250 0.56 -3.0
267,130 - MPMX20_00250 0.56 +1.4
267,130 - MPMX20_00250 0.56 -1.6
267,130 - MPMX20_00250 0.56 +0.0
267,211 - MPMX20_00250 0.62 +2.1

Or see this region's nucleotide sequence