Experiment: 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03582 and MPMX20_03583 are separated by 14 nucleotides MPMX20_03583 and MPMX20_03584 overlap by 4 nucleotides MPMX20_03584 and MPMX20_03585 are separated by 227 nucleotides
MPMX20_03582: MPMX20_03582 - Manganese-binding lipoprotein MntA, at 3,771,966 to 3,772,844
_03582
MPMX20_03583: MPMX20_03583 - Manganese transport system membrane protein MntB, at 3,772,859 to 3,773,719
_03583
MPMX20_03584: MPMX20_03584 - Manganese import ATP-binding protein ScaC, at 3,773,716 to 3,774,390
_03584
MPMX20_03585: MPMX20_03585 - Membrane-bound lytic murein transglycosylase B, at 3,774,618 to 3,775,766
_03585
Position (kb)
3772
3773
3774 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6
7
8
9
10 at 3771.865 kb on + strand at 3771.870 kb on + strand at 3771.916 kb on - strand at 3771.938 kb on + strand at 3771.995 kb on - strand at 3772.009 kb on + strand at 3772.010 kb on + strand at 3772.010 kb on + strand at 3772.010 kb on + strand at 3772.018 kb on - strand at 3772.021 kb on + strand at 3772.043 kb on - strand at 3772.043 kb on - strand at 3772.069 kb on + strand, within MPMX20_03582 at 3772.069 kb on + strand, within MPMX20_03582 at 3772.077 kb on - strand, within MPMX20_03582 at 3772.167 kb on - strand, within MPMX20_03582 at 3772.185 kb on + strand, within MPMX20_03582 at 3772.190 kb on + strand, within MPMX20_03582 at 3772.193 kb on - strand, within MPMX20_03582 at 3772.193 kb on - strand, within MPMX20_03582 at 3772.221 kb on + strand, within MPMX20_03582 at 3772.221 kb on + strand, within MPMX20_03582 at 3772.224 kb on - strand, within MPMX20_03582 at 3772.229 kb on - strand, within MPMX20_03582 at 3772.229 kb on - strand, within MPMX20_03582 at 3772.229 kb on - strand, within MPMX20_03582 at 3772.229 kb on - strand, within MPMX20_03582 at 3772.274 kb on + strand, within MPMX20_03582 at 3772.282 kb on - strand, within MPMX20_03582 at 3772.347 kb on - strand, within MPMX20_03582 at 3772.349 kb on + strand, within MPMX20_03582 at 3772.349 kb on + strand, within MPMX20_03582 at 3772.411 kb on + strand, within MPMX20_03582 at 3772.411 kb on + strand, within MPMX20_03582 at 3772.419 kb on - strand, within MPMX20_03582 at 3772.419 kb on - strand, within MPMX20_03582 at 3772.419 kb on - strand, within MPMX20_03582 at 3772.475 kb on - strand, within MPMX20_03582 at 3772.475 kb on - strand, within MPMX20_03582 at 3772.475 kb on - strand, within MPMX20_03582 at 3772.518 kb on + strand, within MPMX20_03582 at 3772.526 kb on - strand, within MPMX20_03582 at 3772.553 kb on - strand, within MPMX20_03582 at 3772.600 kb on - strand, within MPMX20_03582 at 3772.606 kb on + strand, within MPMX20_03582 at 3772.627 kb on + strand, within MPMX20_03582 at 3772.629 kb on - strand, within MPMX20_03582 at 3772.635 kb on - strand, within MPMX20_03582 at 3772.640 kb on - strand, within MPMX20_03582 at 3772.640 kb on - strand, within MPMX20_03582 at 3772.647 kb on + strand, within MPMX20_03582 at 3772.657 kb on - strand, within MPMX20_03582 at 3772.661 kb on + strand, within MPMX20_03582 at 3772.661 kb on + strand, within MPMX20_03582 at 3772.661 kb on + strand, within MPMX20_03582 at 3772.669 kb on + strand, within MPMX20_03582 at 3772.669 kb on - strand, within MPMX20_03582 at 3772.669 kb on - strand, within MPMX20_03582 at 3772.707 kb on - strand, within MPMX20_03582 at 3772.727 kb on + strand, within MPMX20_03582 at 3772.727 kb on + strand, within MPMX20_03582 at 3772.729 kb on + strand, within MPMX20_03582 at 3772.801 kb on + strand at 3772.809 kb on - strand at 3772.809 kb on - strand at 3772.878 kb on + strand at 3772.878 kb on + strand at 3772.974 kb on + strand, within MPMX20_03583 at 3772.974 kb on + strand, within MPMX20_03583 at 3772.982 kb on - strand, within MPMX20_03583 at 3772.982 kb on - strand, within MPMX20_03583 at 3772.992 kb on - strand, within MPMX20_03583 at 3773.177 kb on + strand, within MPMX20_03583 at 3773.185 kb on - strand, within MPMX20_03583 at 3773.274 kb on - strand, within MPMX20_03583 at 3773.312 kb on - strand, within MPMX20_03583 at 3773.328 kb on - strand, within MPMX20_03583 at 3773.347 kb on - strand, within MPMX20_03583 at 3773.347 kb on - strand, within MPMX20_03583 at 3773.404 kb on + strand, within MPMX20_03583 at 3773.431 kb on + strand, within MPMX20_03583 at 3773.448 kb on - strand, within MPMX20_03583 at 3773.448 kb on - strand, within MPMX20_03583 at 3773.529 kb on - strand, within MPMX20_03583 at 3773.598 kb on - strand, within MPMX20_03583 at 3773.631 kb on - strand, within MPMX20_03583 at 3773.654 kb on + strand at 3773.662 kb on - strand at 3773.662 kb on - strand at 3773.678 kb on + strand at 3773.679 kb on - strand at 3773.723 kb on + strand at 3773.746 kb on - strand at 3773.774 kb on - strand at 3773.826 kb on + strand, within MPMX20_03584 at 3773.845 kb on - strand, within MPMX20_03584 at 3773.871 kb on + strand, within MPMX20_03584 at 3773.937 kb on - strand, within MPMX20_03584 at 3773.968 kb on - strand, within MPMX20_03584 at 3773.980 kb on - strand, within MPMX20_03584 at 3774.008 kb on + strand, within MPMX20_03584 at 3774.016 kb on - strand, within MPMX20_03584 at 3774.041 kb on - strand, within MPMX20_03584 at 3774.096 kb on + strand, within MPMX20_03584 at 3774.144 kb on + strand, within MPMX20_03584 at 3774.144 kb on + strand, within MPMX20_03584 at 3774.152 kb on - strand, within MPMX20_03584 at 3774.154 kb on - strand, within MPMX20_03584 at 3774.161 kb on + strand, within MPMX20_03584 at 3774.164 kb on - strand, within MPMX20_03584 at 3774.174 kb on - strand, within MPMX20_03584 at 3774.302 kb on + strand, within MPMX20_03584 at 3774.312 kb on + strand, within MPMX20_03584 at 3774.327 kb on + strand at 3774.387 kb on + strand at 3774.387 kb on + strand at 3774.390 kb on - strand at 3774.396 kb on - strand at 3774.400 kb on - strand at 3774.442 kb on + strand at 3774.446 kb on - strand at 3774.527 kb on - strand at 3774.577 kb on + strand at 3774.577 kb on + strand at 3774.582 kb on + strand at 3774.585 kb on - strand at 3774.601 kb on + strand at 3774.609 kb on - strand at 3774.700 kb on + strand at 3774.707 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,771,865 + +1.2 3,771,870 + -0.5 3,771,916 - -0.0 3,771,938 + -1.0 3,771,995 - +0.3 3,772,009 + -0.9 3,772,010 + -1.0 3,772,010 + +1.5 3,772,010 + +0.3 3,772,018 - +0.8 3,772,021 + +0.2 3,772,043 - -0.3 3,772,043 - +0.0 3,772,069 + MPMX20_03582 0.12 -1.1 3,772,069 + MPMX20_03582 0.12 +0.0 3,772,077 - MPMX20_03582 0.13 -1.3 3,772,167 - MPMX20_03582 0.23 -0.3 3,772,185 + MPMX20_03582 0.25 -0.3 3,772,190 + MPMX20_03582 0.25 +1.2 3,772,193 - MPMX20_03582 0.26 -0.3 3,772,193 - MPMX20_03582 0.26 -0.9 3,772,221 + MPMX20_03582 0.29 +1.7 3,772,221 + MPMX20_03582 0.29 +1.1 3,772,224 - MPMX20_03582 0.29 -0.6 3,772,229 - MPMX20_03582 0.30 +0.7 3,772,229 - MPMX20_03582 0.30 -1.3 3,772,229 - MPMX20_03582 0.30 -0.1 3,772,229 - MPMX20_03582 0.30 +0.1 3,772,274 + MPMX20_03582 0.35 +0.6 3,772,282 - MPMX20_03582 0.36 -0.4 3,772,347 - MPMX20_03582 0.43 +1.4 3,772,349 + MPMX20_03582 0.44 +0.5 3,772,349 + MPMX20_03582 0.44 -0.7 3,772,411 + MPMX20_03582 0.51 -0.5 3,772,411 + MPMX20_03582 0.51 -1.3 3,772,419 - MPMX20_03582 0.52 -1.7 3,772,419 - MPMX20_03582 0.52 +0.7 3,772,419 - MPMX20_03582 0.52 +0.5 3,772,475 - MPMX20_03582 0.58 -0.3 3,772,475 - MPMX20_03582 0.58 +0.7 3,772,475 - MPMX20_03582 0.58 +0.0 3,772,518 + MPMX20_03582 0.63 -0.3 3,772,526 - MPMX20_03582 0.64 +1.0 3,772,553 - MPMX20_03582 0.67 +0.0 3,772,600 - MPMX20_03582 0.72 +1.0 3,772,606 + MPMX20_03582 0.73 +1.0 3,772,627 + MPMX20_03582 0.75 +4.5 3,772,629 - MPMX20_03582 0.75 -1.1 3,772,635 - MPMX20_03582 0.76 -0.7 3,772,640 - MPMX20_03582 0.77 +0.7 3,772,640 - MPMX20_03582 0.77 +1.2 3,772,647 + MPMX20_03582 0.77 -0.1 3,772,657 - MPMX20_03582 0.79 +0.6 3,772,661 + MPMX20_03582 0.79 +0.6 3,772,661 + MPMX20_03582 0.79 -0.1 3,772,661 + MPMX20_03582 0.79 +6.0 3,772,669 + MPMX20_03582 0.80 -0.2 3,772,669 - MPMX20_03582 0.80 +0.3 3,772,669 - MPMX20_03582 0.80 +0.4 3,772,707 - MPMX20_03582 0.84 -0.3 3,772,727 + MPMX20_03582 0.87 +0.0 3,772,727 + MPMX20_03582 0.87 +0.5 3,772,729 + MPMX20_03582 0.87 +9.0 3,772,801 + -0.4 3,772,809 - -1.3 3,772,809 - -0.6 3,772,878 + -0.8 3,772,878 + +0.2 3,772,974 + MPMX20_03583 0.13 -1.3 3,772,974 + MPMX20_03583 0.13 +0.1 3,772,982 - MPMX20_03583 0.14 +2.4 3,772,982 - MPMX20_03583 0.14 +2.5 3,772,992 - MPMX20_03583 0.15 +0.5 3,773,177 + MPMX20_03583 0.37 -0.7 3,773,185 - MPMX20_03583 0.38 +0.2 3,773,274 - MPMX20_03583 0.48 +1.6 3,773,312 - MPMX20_03583 0.53 +0.6 3,773,328 - MPMX20_03583 0.54 +1.6 3,773,347 - MPMX20_03583 0.57 +1.0 3,773,347 - MPMX20_03583 0.57 -0.1 3,773,404 + MPMX20_03583 0.63 +1.4 3,773,431 + MPMX20_03583 0.66 +0.2 3,773,448 - MPMX20_03583 0.68 -0.5 3,773,448 - MPMX20_03583 0.68 -0.1 3,773,529 - MPMX20_03583 0.78 +1.0 3,773,598 - MPMX20_03583 0.86 +2.7 3,773,631 - MPMX20_03583 0.90 -0.2 3,773,654 + -0.2 3,773,662 - -0.2 3,773,662 - +0.7 3,773,678 + -0.6 3,773,679 - +0.5 3,773,723 + -0.0 3,773,746 - +0.1 3,773,774 - -1.0 3,773,826 + MPMX20_03584 0.16 +3.3 3,773,845 - MPMX20_03584 0.19 +0.6 3,773,871 + MPMX20_03584 0.23 -0.6 3,773,937 - MPMX20_03584 0.33 -0.4 3,773,968 - MPMX20_03584 0.37 -0.7 3,773,980 - MPMX20_03584 0.39 -0.0 3,774,008 + MPMX20_03584 0.43 -0.1 3,774,016 - MPMX20_03584 0.44 -0.8 3,774,041 - MPMX20_03584 0.48 +1.6 3,774,096 + MPMX20_03584 0.56 -0.9 3,774,144 + MPMX20_03584 0.63 +1.0 3,774,144 + MPMX20_03584 0.63 +0.3 3,774,152 - MPMX20_03584 0.65 -0.6 3,774,154 - MPMX20_03584 0.65 -1.0 3,774,161 + MPMX20_03584 0.66 -0.4 3,774,164 - MPMX20_03584 0.66 +0.3 3,774,174 - MPMX20_03584 0.68 -1.3 3,774,302 + MPMX20_03584 0.87 -0.3 3,774,312 + MPMX20_03584 0.88 -0.6 3,774,327 + -0.8 3,774,387 + +1.3 3,774,387 + +0.9 3,774,390 - +1.2 3,774,396 - -0.0 3,774,400 - -0.5 3,774,442 + -1.1 3,774,446 - +1.5 3,774,527 - -0.3 3,774,577 + +0.2 3,774,577 + +0.5 3,774,582 + +0.5 3,774,585 - +10.0 3,774,601 + -0.5 3,774,609 - -1.6 3,774,700 + +1.2 3,774,707 + -1.6
Or see this region's nucleotide sequence