Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03454

Experiment: 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03453 and MPMX20_03454 are separated by 110 nucleotidesMPMX20_03454 and MPMX20_03455 are separated by 45 nucleotidesMPMX20_03455 and MPMX20_03456 overlap by 4 nucleotides MPMX20_03453: MPMX20_03453 - Peptidyl-lysine N-acetyltransferase Pat, at 3,639,936 to 3,642,599 _03453 MPMX20_03454: MPMX20_03454 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 3,642,710 to 3,644,065 _03454 MPMX20_03455: MPMX20_03455 - hypothetical protein, at 3,644,111 to 3,644,434 _03455 MPMX20_03456: MPMX20_03456 - Alpha-ketoglutarate permease, at 3,644,431 to 3,645,726 _03456 Position (kb) 3642 3643 3644 3645Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8at 3641.761 kb on + strand, within MPMX20_03453at 3642.116 kb on + strand, within MPMX20_03453at 3642.121 kb on + strand, within MPMX20_03453at 3642.124 kb on - strand, within MPMX20_03453at 3642.124 kb on - strand, within MPMX20_03453at 3642.152 kb on - strand, within MPMX20_03453at 3642.300 kb on - strand, within MPMX20_03453at 3642.311 kb on - strand, within MPMX20_03453at 3642.319 kb on - strand, within MPMX20_03453at 3642.369 kb on + strandat 3642.399 kb on + strandat 3642.407 kb on - strandat 3642.407 kb on - strandat 3642.503 kb on - strandat 3642.567 kb on - strandat 3642.575 kb on + strandat 3642.584 kb on + strandat 3642.604 kb on + strandat 3642.624 kb on + strandat 3642.628 kb on - strandat 3642.704 kb on + strandat 3644.067 kb on + strandat 3644.075 kb on - strandat 3644.075 kb on - strandat 3644.075 kb on - strandat 3644.075 kb on - strandat 3644.075 kb on - strandat 3644.123 kb on + strandat 3644.173 kb on - strand, within MPMX20_03455at 3644.188 kb on + strand, within MPMX20_03455at 3644.188 kb on + strand, within MPMX20_03455at 3644.196 kb on - strand, within MPMX20_03455at 3644.401 kb on + strand, within MPMX20_03455at 3644.570 kb on + strand, within MPMX20_03456at 3644.570 kb on + strand, within MPMX20_03456at 3644.580 kb on + strand, within MPMX20_03456at 3644.588 kb on - strand, within MPMX20_03456at 3644.638 kb on + strand, within MPMX20_03456at 3644.646 kb on - strand, within MPMX20_03456at 3644.714 kb on - strand, within MPMX20_03456at 3644.768 kb on - strand, within MPMX20_03456at 3644.770 kb on - strand, within MPMX20_03456at 3644.816 kb on - strand, within MPMX20_03456at 3644.850 kb on + strand, within MPMX20_03456at 3644.850 kb on + strand, within MPMX20_03456at 3644.914 kb on - strand, within MPMX20_03456at 3644.964 kb on - strand, within MPMX20_03456at 3645.047 kb on + strand, within MPMX20_03456

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,641,761 + MPMX20_03453 0.69 -0.2
3,642,116 + MPMX20_03453 0.82 -0.3
3,642,121 + MPMX20_03453 0.82 -0.6
3,642,124 - MPMX20_03453 0.82 -0.9
3,642,124 - MPMX20_03453 0.82 +0.8
3,642,152 - MPMX20_03453 0.83 -1.3
3,642,300 - MPMX20_03453 0.89 -1.8
3,642,311 - MPMX20_03453 0.89 +1.0
3,642,319 - MPMX20_03453 0.89 +0.0
3,642,369 + +0.2
3,642,399 + +0.4
3,642,407 - -0.3
3,642,407 - -0.8
3,642,503 - -0.3
3,642,567 - +0.5
3,642,575 + -1.5
3,642,584 + -0.6
3,642,604 + +0.2
3,642,624 + -1.0
3,642,628 - -1.2
3,642,704 + -1.6
3,644,067 + -0.2
3,644,075 - -1.0
3,644,075 - -1.8
3,644,075 - -0.2
3,644,075 - +0.0
3,644,075 - +0.4
3,644,123 + +2.0
3,644,173 - MPMX20_03455 0.19 +1.4
3,644,188 + MPMX20_03455 0.24 +0.3
3,644,188 + MPMX20_03455 0.24 +8.7
3,644,196 - MPMX20_03455 0.26 +0.7
3,644,401 + MPMX20_03455 0.90 +2.7
3,644,570 + MPMX20_03456 0.11 +0.5
3,644,570 + MPMX20_03456 0.11 -0.6
3,644,580 + MPMX20_03456 0.11 -2.0
3,644,588 - MPMX20_03456 0.12 -0.9
3,644,638 + MPMX20_03456 0.16 +0.7
3,644,646 - MPMX20_03456 0.17 +0.4
3,644,714 - MPMX20_03456 0.22 +0.9
3,644,768 - MPMX20_03456 0.26 -0.6
3,644,770 - MPMX20_03456 0.26 -0.4
3,644,816 - MPMX20_03456 0.30 +0.2
3,644,850 + MPMX20_03456 0.32 +1.0
3,644,850 + MPMX20_03456 0.32 -1.0
3,644,914 - MPMX20_03456 0.37 +2.2
3,644,964 - MPMX20_03456 0.41 -0.4
3,645,047 + MPMX20_03456 0.48 -0.9

Or see this region's nucleotide sequence