Experiment: 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03030 and MPMX20_03031 are separated by 109 nucleotides MPMX20_03031 and MPMX20_03032 are separated by 3 nucleotides
MPMX20_03030: MPMX20_03030 - Phosphomannomutase/phosphoglucomutase, at 3,167,525 to 3,168,895
_03030
MPMX20_03031: MPMX20_03031 - Mannose-1-phosphate guanylyltransferase 1, at 3,169,005 to 3,170,441
_03031
MPMX20_03032: MPMX20_03032 - hypothetical protein, at 3,170,445 to 3,171,668
_03032
Position (kb)
3169
3170
3171 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8
9
10 at 3168.018 kb on - strand, within MPMX20_03030 at 3168.018 kb on - strand, within MPMX20_03030 at 3168.114 kb on - strand, within MPMX20_03030 at 3168.266 kb on - strand, within MPMX20_03030 at 3168.283 kb on + strand, within MPMX20_03030 at 3168.283 kb on - strand, within MPMX20_03030 at 3168.305 kb on + strand, within MPMX20_03030 at 3168.313 kb on - strand, within MPMX20_03030 at 3168.320 kb on - strand, within MPMX20_03030 at 3168.359 kb on + strand, within MPMX20_03030 at 3168.413 kb on + strand, within MPMX20_03030 at 3168.421 kb on - strand, within MPMX20_03030 at 3168.435 kb on + strand, within MPMX20_03030 at 3168.462 kb on - strand, within MPMX20_03030 at 3168.558 kb on + strand, within MPMX20_03030 at 3168.566 kb on - strand, within MPMX20_03030 at 3168.571 kb on + strand, within MPMX20_03030 at 3168.579 kb on - strand, within MPMX20_03030 at 3168.595 kb on + strand, within MPMX20_03030 at 3168.595 kb on + strand, within MPMX20_03030 at 3168.603 kb on - strand, within MPMX20_03030 at 3168.621 kb on - strand, within MPMX20_03030 at 3168.659 kb on - strand, within MPMX20_03030 at 3168.746 kb on + strand, within MPMX20_03030 at 3168.746 kb on + strand, within MPMX20_03030 at 3168.751 kb on + strand, within MPMX20_03030 at 3168.769 kb on + strand at 3168.772 kb on - strand at 3168.777 kb on - strand at 3168.846 kb on - strand at 3168.863 kb on + strand at 3168.917 kb on + strand at 3168.917 kb on + strand at 3168.925 kb on - strand at 3168.925 kb on - strand at 3168.925 kb on - strand at 3169.002 kb on + strand at 3169.106 kb on + strand at 3169.116 kb on + strand at 3169.124 kb on - strand at 3169.181 kb on - strand, within MPMX20_03031 at 3169.210 kb on + strand, within MPMX20_03031 at 3169.213 kb on - strand, within MPMX20_03031 at 3169.215 kb on + strand, within MPMX20_03031 at 3169.235 kb on - strand, within MPMX20_03031 at 3169.235 kb on - strand, within MPMX20_03031 at 3169.235 kb on - strand, within MPMX20_03031 at 3169.270 kb on - strand, within MPMX20_03031 at 3169.270 kb on - strand, within MPMX20_03031 at 3169.290 kb on + strand, within MPMX20_03031 at 3169.293 kb on - strand, within MPMX20_03031 at 3169.328 kb on + strand, within MPMX20_03031 at 3169.337 kb on - strand, within MPMX20_03031 at 3169.346 kb on + strand, within MPMX20_03031 at 3169.372 kb on + strand, within MPMX20_03031 at 3169.401 kb on + strand, within MPMX20_03031 at 3169.411 kb on + strand, within MPMX20_03031 at 3169.411 kb on + strand, within MPMX20_03031 at 3169.411 kb on + strand, within MPMX20_03031 at 3169.411 kb on + strand, within MPMX20_03031 at 3169.411 kb on + strand, within MPMX20_03031 at 3169.411 kb on + strand, within MPMX20_03031 at 3169.411 kb on + strand, within MPMX20_03031 at 3169.411 kb on + strand, within MPMX20_03031 at 3169.419 kb on - strand, within MPMX20_03031 at 3169.419 kb on - strand, within MPMX20_03031 at 3169.419 kb on - strand, within MPMX20_03031 at 3169.419 kb on - strand, within MPMX20_03031 at 3169.419 kb on - strand, within MPMX20_03031 at 3169.419 kb on - strand, within MPMX20_03031 at 3169.419 kb on - strand, within MPMX20_03031 at 3169.464 kb on + strand, within MPMX20_03031 at 3169.477 kb on - strand, within MPMX20_03031 at 3169.549 kb on + strand, within MPMX20_03031 at 3169.549 kb on + strand, within MPMX20_03031 at 3169.557 kb on - strand, within MPMX20_03031 at 3169.646 kb on - strand, within MPMX20_03031 at 3169.668 kb on + strand, within MPMX20_03031 at 3169.689 kb on + strand, within MPMX20_03031 at 3169.697 kb on - strand, within MPMX20_03031 at 3169.697 kb on - strand, within MPMX20_03031 at 3169.796 kb on + strand, within MPMX20_03031 at 3169.796 kb on + strand, within MPMX20_03031 at 3169.796 kb on + strand, within MPMX20_03031 at 3169.796 kb on + strand, within MPMX20_03031 at 3169.804 kb on - strand, within MPMX20_03031 at 3169.804 kb on - strand, within MPMX20_03031 at 3169.804 kb on - strand, within MPMX20_03031 at 3169.813 kb on + strand, within MPMX20_03031 at 3169.852 kb on + strand, within MPMX20_03031 at 3169.861 kb on + strand, within MPMX20_03031 at 3169.865 kb on - strand, within MPMX20_03031 at 3169.930 kb on + strand, within MPMX20_03031 at 3169.940 kb on + strand, within MPMX20_03031 at 3169.986 kb on + strand, within MPMX20_03031 at 3170.248 kb on - strand, within MPMX20_03031 at 3170.286 kb on + strand, within MPMX20_03031 at 3170.294 kb on - strand, within MPMX20_03031 at 3170.302 kb on + strand at 3170.314 kb on + strand at 3170.451 kb on + strand at 3170.532 kb on - strand at 3170.625 kb on - strand, within MPMX20_03032 at 3170.631 kb on + strand, within MPMX20_03032 at 3170.631 kb on + strand, within MPMX20_03032 at 3170.696 kb on + strand, within MPMX20_03032 at 3170.696 kb on + strand, within MPMX20_03032 at 3170.696 kb on + strand, within MPMX20_03032 at 3170.704 kb on - strand, within MPMX20_03032 at 3170.722 kb on - strand, within MPMX20_03032 at 3170.741 kb on + strand, within MPMX20_03032 at 3170.741 kb on + strand, within MPMX20_03032 at 3170.939 kb on + strand, within MPMX20_03032 at 3170.957 kb on - strand, within MPMX20_03032 at 3171.004 kb on + strand, within MPMX20_03032 at 3171.012 kb on - strand, within MPMX20_03032 at 3171.012 kb on - strand, within MPMX20_03032 at 3171.026 kb on + strand, within MPMX20_03032 at 3171.032 kb on - strand, within MPMX20_03032 at 3171.102 kb on - strand, within MPMX20_03032 at 3171.102 kb on - strand, within MPMX20_03032 at 3171.102 kb on - strand, within MPMX20_03032 at 3171.132 kb on + strand, within MPMX20_03032 at 3171.161 kb on - strand, within MPMX20_03032 at 3171.288 kb on - strand, within MPMX20_03032 at 3171.305 kb on + strand, within MPMX20_03032 at 3171.313 kb on + strand, within MPMX20_03032 at 3171.313 kb on - strand, within MPMX20_03032 at 3171.313 kb on - strand, within MPMX20_03032 at 3171.321 kb on - strand, within MPMX20_03032 at 3171.321 kb on - strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,168,018 - MPMX20_03030 0.36 -0.9 3,168,018 - MPMX20_03030 0.36 +0.2 3,168,114 - MPMX20_03030 0.43 +0.8 3,168,266 - MPMX20_03030 0.54 +1.5 3,168,283 + MPMX20_03030 0.55 +0.2 3,168,283 - MPMX20_03030 0.55 -1.1 3,168,305 + MPMX20_03030 0.57 -0.1 3,168,313 - MPMX20_03030 0.57 -0.5 3,168,320 - MPMX20_03030 0.58 +2.0 3,168,359 + MPMX20_03030 0.61 +1.3 3,168,413 + MPMX20_03030 0.65 -0.7 3,168,421 - MPMX20_03030 0.65 -0.1 3,168,435 + MPMX20_03030 0.66 -0.7 3,168,462 - MPMX20_03030 0.68 +0.3 3,168,558 + MPMX20_03030 0.75 +0.5 3,168,566 - MPMX20_03030 0.76 -0.9 3,168,571 + MPMX20_03030 0.76 -0.1 3,168,579 - MPMX20_03030 0.77 +0.3 3,168,595 + MPMX20_03030 0.78 +0.1 3,168,595 + MPMX20_03030 0.78 +0.4 3,168,603 - MPMX20_03030 0.79 +1.8 3,168,621 - MPMX20_03030 0.80 -0.5 3,168,659 - MPMX20_03030 0.83 +0.9 3,168,746 + MPMX20_03030 0.89 +0.1 3,168,746 + MPMX20_03030 0.89 +0.7 3,168,751 + MPMX20_03030 0.89 +1.1 3,168,769 + +0.2 3,168,772 - -0.5 3,168,777 - +0.3 3,168,846 - +0.0 3,168,863 + +0.7 3,168,917 + +0.1 3,168,917 + -0.3 3,168,925 - -0.5 3,168,925 - -0.3 3,168,925 - +0.4 3,169,002 + +1.5 3,169,106 + -0.5 3,169,116 + -0.7 3,169,124 - +0.3 3,169,181 - MPMX20_03031 0.12 -0.1 3,169,210 + MPMX20_03031 0.14 -0.8 3,169,213 - MPMX20_03031 0.14 -1.6 3,169,215 + MPMX20_03031 0.15 +0.4 3,169,235 - MPMX20_03031 0.16 -0.3 3,169,235 - MPMX20_03031 0.16 +0.7 3,169,235 - MPMX20_03031 0.16 +2.3 3,169,270 - MPMX20_03031 0.18 +1.4 3,169,270 - MPMX20_03031 0.18 +0.6 3,169,290 + MPMX20_03031 0.20 +2.9 3,169,293 - MPMX20_03031 0.20 +1.2 3,169,328 + MPMX20_03031 0.22 -1.2 3,169,337 - MPMX20_03031 0.23 +0.3 3,169,346 + MPMX20_03031 0.24 +0.1 3,169,372 + MPMX20_03031 0.26 +2.7 3,169,401 + MPMX20_03031 0.28 +0.7 3,169,411 + MPMX20_03031 0.28 -1.2 3,169,411 + MPMX20_03031 0.28 +0.2 3,169,411 + MPMX20_03031 0.28 -0.1 3,169,411 + MPMX20_03031 0.28 +0.7 3,169,411 + MPMX20_03031 0.28 +0.5 3,169,411 + MPMX20_03031 0.28 +1.2 3,169,411 + MPMX20_03031 0.28 +0.1 3,169,411 + MPMX20_03031 0.28 +0.2 3,169,419 - MPMX20_03031 0.29 +0.5 3,169,419 - MPMX20_03031 0.29 -0.3 3,169,419 - MPMX20_03031 0.29 +1.3 3,169,419 - MPMX20_03031 0.29 +0.4 3,169,419 - MPMX20_03031 0.29 +0.1 3,169,419 - MPMX20_03031 0.29 +0.1 3,169,419 - MPMX20_03031 0.29 +0.6 3,169,464 + MPMX20_03031 0.32 +10.1 3,169,477 - MPMX20_03031 0.33 -0.4 3,169,549 + MPMX20_03031 0.38 +0.0 3,169,549 + MPMX20_03031 0.38 -0.9 3,169,557 - MPMX20_03031 0.38 -0.7 3,169,646 - MPMX20_03031 0.45 +1.0 3,169,668 + MPMX20_03031 0.46 +0.5 3,169,689 + MPMX20_03031 0.48 +0.5 3,169,697 - MPMX20_03031 0.48 +0.7 3,169,697 - MPMX20_03031 0.48 -0.3 3,169,796 + MPMX20_03031 0.55 -0.9 3,169,796 + MPMX20_03031 0.55 -1.7 3,169,796 + MPMX20_03031 0.55 +0.8 3,169,796 + MPMX20_03031 0.55 +0.1 3,169,804 - MPMX20_03031 0.56 +4.5 3,169,804 - MPMX20_03031 0.56 +0.2 3,169,804 - MPMX20_03031 0.56 -1.4 3,169,813 + MPMX20_03031 0.56 +0.8 3,169,852 + MPMX20_03031 0.59 +0.1 3,169,861 + MPMX20_03031 0.60 +0.2 3,169,865 - MPMX20_03031 0.60 +0.2 3,169,930 + MPMX20_03031 0.64 +2.1 3,169,940 + MPMX20_03031 0.65 +1.9 3,169,986 + MPMX20_03031 0.68 -0.9 3,170,248 - MPMX20_03031 0.86 -1.0 3,170,286 + MPMX20_03031 0.89 +0.5 3,170,294 - MPMX20_03031 0.90 -0.7 3,170,302 + -0.1 3,170,314 + +0.5 3,170,451 + -1.9 3,170,532 - +3.1 3,170,625 - MPMX20_03032 0.15 -0.9 3,170,631 + MPMX20_03032 0.15 +0.3 3,170,631 + MPMX20_03032 0.15 -0.5 3,170,696 + MPMX20_03032 0.21 -1.2 3,170,696 + MPMX20_03032 0.21 +9.1 3,170,696 + MPMX20_03032 0.21 +1.9 3,170,704 - MPMX20_03032 0.21 -1.3 3,170,722 - MPMX20_03032 0.23 -0.4 3,170,741 + MPMX20_03032 0.24 +1.1 3,170,741 + MPMX20_03032 0.24 -0.2 3,170,939 + MPMX20_03032 0.40 +2.4 3,170,957 - MPMX20_03032 0.42 -0.0 3,171,004 + MPMX20_03032 0.46 -0.6 3,171,012 - MPMX20_03032 0.46 -1.5 3,171,012 - MPMX20_03032 0.46 -0.6 3,171,026 + MPMX20_03032 0.47 +1.3 3,171,032 - MPMX20_03032 0.48 -0.5 3,171,102 - MPMX20_03032 0.54 -2.0 3,171,102 - MPMX20_03032 0.54 -0.2 3,171,102 - MPMX20_03032 0.54 -0.7 3,171,132 + MPMX20_03032 0.56 +1.0 3,171,161 - MPMX20_03032 0.58 +0.5 3,171,288 - MPMX20_03032 0.69 -0.6 3,171,305 + MPMX20_03032 0.70 -0.9 3,171,313 + MPMX20_03032 0.71 +1.4 3,171,313 - MPMX20_03032 0.71 +0.2 3,171,313 - MPMX20_03032 0.71 -1.3 3,171,321 - MPMX20_03032 0.72 +0.4 3,171,321 - MPMX20_03032 0.72 -0.6 3,171,395 + MPMX20_03032 0.78 -2.8 3,171,395 + MPMX20_03032 0.78 -1.8 3,171,395 + MPMX20_03032 0.78 -0.6 3,171,395 + MPMX20_03032 0.78 +0.1 3,171,395 + MPMX20_03032 0.78 -0.1 3,171,395 + MPMX20_03032 0.78 +1.1 3,171,403 - MPMX20_03032 0.78 -1.0 3,171,403 - MPMX20_03032 0.78 -1.4 3,171,403 - MPMX20_03032 0.78 -1.0 3,171,403 - MPMX20_03032 0.78 -2.2 3,171,403 - MPMX20_03032 0.78 +0.7
Or see this region's nucleotide sequence