Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03031

Experiment: 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03030 and MPMX20_03031 are separated by 109 nucleotidesMPMX20_03031 and MPMX20_03032 are separated by 3 nucleotides MPMX20_03030: MPMX20_03030 - Phosphomannomutase/phosphoglucomutase, at 3,167,525 to 3,168,895 _03030 MPMX20_03031: MPMX20_03031 - Mannose-1-phosphate guanylyltransferase 1, at 3,169,005 to 3,170,441 _03031 MPMX20_03032: MPMX20_03032 - hypothetical protein, at 3,170,445 to 3,171,668 _03032 Position (kb) 3169 3170 3171Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10at 3168.018 kb on - strand, within MPMX20_03030at 3168.018 kb on - strand, within MPMX20_03030at 3168.114 kb on - strand, within MPMX20_03030at 3168.266 kb on - strand, within MPMX20_03030at 3168.283 kb on + strand, within MPMX20_03030at 3168.283 kb on - strand, within MPMX20_03030at 3168.305 kb on + strand, within MPMX20_03030at 3168.313 kb on - strand, within MPMX20_03030at 3168.320 kb on - strand, within MPMX20_03030at 3168.359 kb on + strand, within MPMX20_03030at 3168.413 kb on + strand, within MPMX20_03030at 3168.421 kb on - strand, within MPMX20_03030at 3168.435 kb on + strand, within MPMX20_03030at 3168.462 kb on - strand, within MPMX20_03030at 3168.558 kb on + strand, within MPMX20_03030at 3168.566 kb on - strand, within MPMX20_03030at 3168.571 kb on + strand, within MPMX20_03030at 3168.579 kb on - strand, within MPMX20_03030at 3168.595 kb on + strand, within MPMX20_03030at 3168.595 kb on + strand, within MPMX20_03030at 3168.603 kb on - strand, within MPMX20_03030at 3168.621 kb on - strand, within MPMX20_03030at 3168.659 kb on - strand, within MPMX20_03030at 3168.746 kb on + strand, within MPMX20_03030at 3168.746 kb on + strand, within MPMX20_03030at 3168.751 kb on + strand, within MPMX20_03030at 3168.769 kb on + strandat 3168.772 kb on - strandat 3168.777 kb on - strandat 3168.846 kb on - strandat 3168.863 kb on + strandat 3168.917 kb on + strandat 3168.917 kb on + strandat 3168.925 kb on - strandat 3168.925 kb on - strandat 3168.925 kb on - strandat 3169.002 kb on + strandat 3169.106 kb on + strandat 3169.116 kb on + strandat 3169.124 kb on - strandat 3169.181 kb on - strand, within MPMX20_03031at 3169.210 kb on + strand, within MPMX20_03031at 3169.213 kb on - strand, within MPMX20_03031at 3169.215 kb on + strand, within MPMX20_03031at 3169.235 kb on - strand, within MPMX20_03031at 3169.235 kb on - strand, within MPMX20_03031at 3169.235 kb on - strand, within MPMX20_03031at 3169.270 kb on - strand, within MPMX20_03031at 3169.270 kb on - strand, within MPMX20_03031at 3169.290 kb on + strand, within MPMX20_03031at 3169.293 kb on - strand, within MPMX20_03031at 3169.328 kb on + strand, within MPMX20_03031at 3169.337 kb on - strand, within MPMX20_03031at 3169.346 kb on + strand, within MPMX20_03031at 3169.372 kb on + strand, within MPMX20_03031at 3169.401 kb on + strand, within MPMX20_03031at 3169.411 kb on + strand, within MPMX20_03031at 3169.411 kb on + strand, within MPMX20_03031at 3169.411 kb on + strand, within MPMX20_03031at 3169.411 kb on + strand, within MPMX20_03031at 3169.411 kb on + strand, within MPMX20_03031at 3169.411 kb on + strand, within MPMX20_03031at 3169.411 kb on + strand, within MPMX20_03031at 3169.411 kb on + strand, within MPMX20_03031at 3169.419 kb on - strand, within MPMX20_03031at 3169.419 kb on - strand, within MPMX20_03031at 3169.419 kb on - strand, within MPMX20_03031at 3169.419 kb on - strand, within MPMX20_03031at 3169.419 kb on - strand, within MPMX20_03031at 3169.419 kb on - strand, within MPMX20_03031at 3169.419 kb on - strand, within MPMX20_03031at 3169.464 kb on + strand, within MPMX20_03031at 3169.477 kb on - strand, within MPMX20_03031at 3169.549 kb on + strand, within MPMX20_03031at 3169.549 kb on + strand, within MPMX20_03031at 3169.557 kb on - strand, within MPMX20_03031at 3169.646 kb on - strand, within MPMX20_03031at 3169.668 kb on + strand, within MPMX20_03031at 3169.689 kb on + strand, within MPMX20_03031at 3169.697 kb on - strand, within MPMX20_03031at 3169.697 kb on - strand, within MPMX20_03031at 3169.796 kb on + strand, within MPMX20_03031at 3169.796 kb on + strand, within MPMX20_03031at 3169.796 kb on + strand, within MPMX20_03031at 3169.796 kb on + strand, within MPMX20_03031at 3169.804 kb on - strand, within MPMX20_03031at 3169.804 kb on - strand, within MPMX20_03031at 3169.804 kb on - strand, within MPMX20_03031at 3169.813 kb on + strand, within MPMX20_03031at 3169.852 kb on + strand, within MPMX20_03031at 3169.861 kb on + strand, within MPMX20_03031at 3169.865 kb on - strand, within MPMX20_03031at 3169.930 kb on + strand, within MPMX20_03031at 3169.940 kb on + strand, within MPMX20_03031at 3169.986 kb on + strand, within MPMX20_03031at 3170.248 kb on - strand, within MPMX20_03031at 3170.286 kb on + strand, within MPMX20_03031at 3170.294 kb on - strand, within MPMX20_03031at 3170.302 kb on + strandat 3170.314 kb on + strandat 3170.451 kb on + strandat 3170.532 kb on - strandat 3170.625 kb on - strand, within MPMX20_03032at 3170.631 kb on + strand, within MPMX20_03032at 3170.631 kb on + strand, within MPMX20_03032at 3170.696 kb on + strand, within MPMX20_03032at 3170.696 kb on + strand, within MPMX20_03032at 3170.696 kb on + strand, within MPMX20_03032at 3170.704 kb on - strand, within MPMX20_03032at 3170.722 kb on - strand, within MPMX20_03032at 3170.741 kb on + strand, within MPMX20_03032at 3170.741 kb on + strand, within MPMX20_03032at 3170.939 kb on + strand, within MPMX20_03032at 3170.957 kb on - strand, within MPMX20_03032at 3171.004 kb on + strand, within MPMX20_03032at 3171.012 kb on - strand, within MPMX20_03032at 3171.012 kb on - strand, within MPMX20_03032at 3171.026 kb on + strand, within MPMX20_03032at 3171.032 kb on - strand, within MPMX20_03032at 3171.102 kb on - strand, within MPMX20_03032at 3171.102 kb on - strand, within MPMX20_03032at 3171.102 kb on - strand, within MPMX20_03032at 3171.132 kb on + strand, within MPMX20_03032at 3171.161 kb on - strand, within MPMX20_03032at 3171.288 kb on - strand, within MPMX20_03032at 3171.305 kb on + strand, within MPMX20_03032at 3171.313 kb on + strand, within MPMX20_03032at 3171.313 kb on - strand, within MPMX20_03032at 3171.313 kb on - strand, within MPMX20_03032at 3171.321 kb on - strand, within MPMX20_03032at 3171.321 kb on - strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,168,018 - MPMX20_03030 0.36 -0.9
3,168,018 - MPMX20_03030 0.36 +0.2
3,168,114 - MPMX20_03030 0.43 +0.8
3,168,266 - MPMX20_03030 0.54 +1.5
3,168,283 + MPMX20_03030 0.55 +0.2
3,168,283 - MPMX20_03030 0.55 -1.1
3,168,305 + MPMX20_03030 0.57 -0.1
3,168,313 - MPMX20_03030 0.57 -0.5
3,168,320 - MPMX20_03030 0.58 +2.0
3,168,359 + MPMX20_03030 0.61 +1.3
3,168,413 + MPMX20_03030 0.65 -0.7
3,168,421 - MPMX20_03030 0.65 -0.1
3,168,435 + MPMX20_03030 0.66 -0.7
3,168,462 - MPMX20_03030 0.68 +0.3
3,168,558 + MPMX20_03030 0.75 +0.5
3,168,566 - MPMX20_03030 0.76 -0.9
3,168,571 + MPMX20_03030 0.76 -0.1
3,168,579 - MPMX20_03030 0.77 +0.3
3,168,595 + MPMX20_03030 0.78 +0.1
3,168,595 + MPMX20_03030 0.78 +0.4
3,168,603 - MPMX20_03030 0.79 +1.8
3,168,621 - MPMX20_03030 0.80 -0.5
3,168,659 - MPMX20_03030 0.83 +0.9
3,168,746 + MPMX20_03030 0.89 +0.1
3,168,746 + MPMX20_03030 0.89 +0.7
3,168,751 + MPMX20_03030 0.89 +1.1
3,168,769 + +0.2
3,168,772 - -0.5
3,168,777 - +0.3
3,168,846 - +0.0
3,168,863 + +0.7
3,168,917 + +0.1
3,168,917 + -0.3
3,168,925 - -0.5
3,168,925 - -0.3
3,168,925 - +0.4
3,169,002 + +1.5
3,169,106 + -0.5
3,169,116 + -0.7
3,169,124 - +0.3
3,169,181 - MPMX20_03031 0.12 -0.1
3,169,210 + MPMX20_03031 0.14 -0.8
3,169,213 - MPMX20_03031 0.14 -1.6
3,169,215 + MPMX20_03031 0.15 +0.4
3,169,235 - MPMX20_03031 0.16 -0.3
3,169,235 - MPMX20_03031 0.16 +0.7
3,169,235 - MPMX20_03031 0.16 +2.3
3,169,270 - MPMX20_03031 0.18 +1.4
3,169,270 - MPMX20_03031 0.18 +0.6
3,169,290 + MPMX20_03031 0.20 +2.9
3,169,293 - MPMX20_03031 0.20 +1.2
3,169,328 + MPMX20_03031 0.22 -1.2
3,169,337 - MPMX20_03031 0.23 +0.3
3,169,346 + MPMX20_03031 0.24 +0.1
3,169,372 + MPMX20_03031 0.26 +2.7
3,169,401 + MPMX20_03031 0.28 +0.7
3,169,411 + MPMX20_03031 0.28 -1.2
3,169,411 + MPMX20_03031 0.28 +0.2
3,169,411 + MPMX20_03031 0.28 -0.1
3,169,411 + MPMX20_03031 0.28 +0.7
3,169,411 + MPMX20_03031 0.28 +0.5
3,169,411 + MPMX20_03031 0.28 +1.2
3,169,411 + MPMX20_03031 0.28 +0.1
3,169,411 + MPMX20_03031 0.28 +0.2
3,169,419 - MPMX20_03031 0.29 +0.5
3,169,419 - MPMX20_03031 0.29 -0.3
3,169,419 - MPMX20_03031 0.29 +1.3
3,169,419 - MPMX20_03031 0.29 +0.4
3,169,419 - MPMX20_03031 0.29 +0.1
3,169,419 - MPMX20_03031 0.29 +0.1
3,169,419 - MPMX20_03031 0.29 +0.6
3,169,464 + MPMX20_03031 0.32 +10.1
3,169,477 - MPMX20_03031 0.33 -0.4
3,169,549 + MPMX20_03031 0.38 +0.0
3,169,549 + MPMX20_03031 0.38 -0.9
3,169,557 - MPMX20_03031 0.38 -0.7
3,169,646 - MPMX20_03031 0.45 +1.0
3,169,668 + MPMX20_03031 0.46 +0.5
3,169,689 + MPMX20_03031 0.48 +0.5
3,169,697 - MPMX20_03031 0.48 +0.7
3,169,697 - MPMX20_03031 0.48 -0.3
3,169,796 + MPMX20_03031 0.55 -0.9
3,169,796 + MPMX20_03031 0.55 -1.7
3,169,796 + MPMX20_03031 0.55 +0.8
3,169,796 + MPMX20_03031 0.55 +0.1
3,169,804 - MPMX20_03031 0.56 +4.5
3,169,804 - MPMX20_03031 0.56 +0.2
3,169,804 - MPMX20_03031 0.56 -1.4
3,169,813 + MPMX20_03031 0.56 +0.8
3,169,852 + MPMX20_03031 0.59 +0.1
3,169,861 + MPMX20_03031 0.60 +0.2
3,169,865 - MPMX20_03031 0.60 +0.2
3,169,930 + MPMX20_03031 0.64 +2.1
3,169,940 + MPMX20_03031 0.65 +1.9
3,169,986 + MPMX20_03031 0.68 -0.9
3,170,248 - MPMX20_03031 0.86 -1.0
3,170,286 + MPMX20_03031 0.89 +0.5
3,170,294 - MPMX20_03031 0.90 -0.7
3,170,302 + -0.1
3,170,314 + +0.5
3,170,451 + -1.9
3,170,532 - +3.1
3,170,625 - MPMX20_03032 0.15 -0.9
3,170,631 + MPMX20_03032 0.15 +0.3
3,170,631 + MPMX20_03032 0.15 -0.5
3,170,696 + MPMX20_03032 0.21 -1.2
3,170,696 + MPMX20_03032 0.21 +9.1
3,170,696 + MPMX20_03032 0.21 +1.9
3,170,704 - MPMX20_03032 0.21 -1.3
3,170,722 - MPMX20_03032 0.23 -0.4
3,170,741 + MPMX20_03032 0.24 +1.1
3,170,741 + MPMX20_03032 0.24 -0.2
3,170,939 + MPMX20_03032 0.40 +2.4
3,170,957 - MPMX20_03032 0.42 -0.0
3,171,004 + MPMX20_03032 0.46 -0.6
3,171,012 - MPMX20_03032 0.46 -1.5
3,171,012 - MPMX20_03032 0.46 -0.6
3,171,026 + MPMX20_03032 0.47 +1.3
3,171,032 - MPMX20_03032 0.48 -0.5
3,171,102 - MPMX20_03032 0.54 -2.0
3,171,102 - MPMX20_03032 0.54 -0.2
3,171,102 - MPMX20_03032 0.54 -0.7
3,171,132 + MPMX20_03032 0.56 +1.0
3,171,161 - MPMX20_03032 0.58 +0.5
3,171,288 - MPMX20_03032 0.69 -0.6
3,171,305 + MPMX20_03032 0.70 -0.9
3,171,313 + MPMX20_03032 0.71 +1.4
3,171,313 - MPMX20_03032 0.71 +0.2
3,171,313 - MPMX20_03032 0.71 -1.3
3,171,321 - MPMX20_03032 0.72 +0.4
3,171,321 - MPMX20_03032 0.72 -0.6
3,171,395 + MPMX20_03032 0.78 -2.8
3,171,395 + MPMX20_03032 0.78 -1.8
3,171,395 + MPMX20_03032 0.78 -0.6
3,171,395 + MPMX20_03032 0.78 +0.1
3,171,395 + MPMX20_03032 0.78 -0.1
3,171,395 + MPMX20_03032 0.78 +1.1
3,171,403 - MPMX20_03032 0.78 -1.0
3,171,403 - MPMX20_03032 0.78 -1.4
3,171,403 - MPMX20_03032 0.78 -1.0
3,171,403 - MPMX20_03032 0.78 -2.2
3,171,403 - MPMX20_03032 0.78 +0.7

Or see this region's nucleotide sequence