Experiment: 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03244 and MPMX20_03245 are separated by 226 nucleotides MPMX20_03245 and MPMX20_03246 are separated by 290 nucleotides MPMX20_03246 and MPMX20_03247 overlap by 1 nucleotides
MPMX20_03244: MPMX20_03244 - Histidine-binding periplasmic protein, at 3,414,008 to 3,414,790
_03244
MPMX20_03245: MPMX20_03245 - Lysine/arginine/ornithine-binding periplasmic protein, at 3,415,017 to 3,415,799
_03245
MPMX20_03246: MPMX20_03246 - Flavin prenyltransferase UbiX, at 3,416,090 to 3,416,749
_03246
MPMX20_03247: MPMX20_03247 - Amidophosphoribosyltransferase, at 3,416,749 to 3,418,266
_03247
Position (kb)
3415
3416 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3414.092 kb on + strand, within MPMX20_03244 at 3414.105 kb on - strand, within MPMX20_03244 at 3414.138 kb on - strand, within MPMX20_03244 at 3414.138 kb on - strand, within MPMX20_03244 at 3414.138 kb on - strand, within MPMX20_03244 at 3414.138 kb on - strand, within MPMX20_03244 at 3414.219 kb on - strand, within MPMX20_03244 at 3414.245 kb on - strand, within MPMX20_03244 at 3414.278 kb on - strand, within MPMX20_03244 at 3414.356 kb on + strand, within MPMX20_03244 at 3414.368 kb on + strand, within MPMX20_03244 at 3414.412 kb on - strand, within MPMX20_03244 at 3414.429 kb on + strand, within MPMX20_03244 at 3414.440 kb on + strand, within MPMX20_03244 at 3414.448 kb on - strand, within MPMX20_03244 at 3414.585 kb on + strand, within MPMX20_03244 at 3414.619 kb on - strand, within MPMX20_03244 at 3414.631 kb on - strand, within MPMX20_03244 at 3414.687 kb on - strand, within MPMX20_03244 at 3414.691 kb on + strand, within MPMX20_03244 at 3414.699 kb on - strand, within MPMX20_03244 at 3414.699 kb on - strand, within MPMX20_03244 at 3414.832 kb on + strand at 3414.842 kb on + strand at 3414.842 kb on + strand at 3414.850 kb on - strand at 3414.862 kb on - strand at 3414.937 kb on + strand at 3414.945 kb on - strand at 3414.945 kb on - strand at 3415.007 kb on - strand at 3415.007 kb on - strand at 3415.230 kb on + strand, within MPMX20_03245 at 3415.230 kb on + strand, within MPMX20_03245 at 3415.286 kb on + strand, within MPMX20_03245 at 3415.294 kb on - strand, within MPMX20_03245 at 3415.299 kb on - strand, within MPMX20_03245 at 3415.364 kb on - strand, within MPMX20_03245 at 3415.378 kb on + strand, within MPMX20_03245 at 3415.385 kb on - strand, within MPMX20_03245 at 3415.420 kb on - strand, within MPMX20_03245 at 3415.476 kb on - strand, within MPMX20_03245 at 3415.476 kb on - strand, within MPMX20_03245 at 3415.523 kb on - strand, within MPMX20_03245 at 3415.529 kb on + strand, within MPMX20_03245 at 3415.595 kb on - strand, within MPMX20_03245 at 3415.681 kb on - strand, within MPMX20_03245 at 3415.681 kb on - strand, within MPMX20_03245 at 3415.696 kb on - strand, within MPMX20_03245 at 3415.700 kb on + strand, within MPMX20_03245 at 3415.703 kb on - strand, within MPMX20_03245 at 3415.703 kb on - strand, within MPMX20_03245 at 3415.718 kb on - strand, within MPMX20_03245 at 3415.759 kb on + strand at 3415.779 kb on + strand at 3415.801 kb on + strand at 3415.847 kb on - strand at 3415.852 kb on - strand at 3415.873 kb on + strand at 3415.909 kb on + strand at 3416.040 kb on + strand at 3416.080 kb on - strand at 3416.087 kb on + strand at 3416.095 kb on - strand at 3416.095 kb on - strand at 3416.095 kb on - strand at 3416.738 kb on - strand at 3416.743 kb on - strand at 3416.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,414,092 + MPMX20_03244 0.11 -0.4 3,414,105 - MPMX20_03244 0.12 +2.3 3,414,138 - MPMX20_03244 0.17 +0.8 3,414,138 - MPMX20_03244 0.17 +0.1 3,414,138 - MPMX20_03244 0.17 -2.6 3,414,138 - MPMX20_03244 0.17 +0.3 3,414,219 - MPMX20_03244 0.27 -0.9 3,414,245 - MPMX20_03244 0.30 -0.3 3,414,278 - MPMX20_03244 0.34 +0.5 3,414,356 + MPMX20_03244 0.44 -0.2 3,414,368 + MPMX20_03244 0.46 -0.7 3,414,412 - MPMX20_03244 0.52 -0.1 3,414,429 + MPMX20_03244 0.54 +2.3 3,414,440 + MPMX20_03244 0.55 -1.8 3,414,448 - MPMX20_03244 0.56 +0.0 3,414,585 + MPMX20_03244 0.74 -3.3 3,414,619 - MPMX20_03244 0.78 -1.1 3,414,631 - MPMX20_03244 0.80 -0.5 3,414,687 - MPMX20_03244 0.87 -1.5 3,414,691 + MPMX20_03244 0.87 -1.6 3,414,699 - MPMX20_03244 0.88 +0.9 3,414,699 - MPMX20_03244 0.88 -0.2 3,414,832 + -0.8 3,414,842 + +0.1 3,414,842 + -3.1 3,414,850 - -1.5 3,414,862 - +1.6 3,414,937 + +0.0 3,414,945 - -0.5 3,414,945 - -1.9 3,415,007 - -2.2 3,415,007 - -1.1 3,415,230 + MPMX20_03245 0.27 -2.0 3,415,230 + MPMX20_03245 0.27 -0.3 3,415,286 + MPMX20_03245 0.34 -1.5 3,415,294 - MPMX20_03245 0.35 -2.2 3,415,299 - MPMX20_03245 0.36 -1.3 3,415,364 - MPMX20_03245 0.44 -1.2 3,415,378 + MPMX20_03245 0.46 -0.3 3,415,385 - MPMX20_03245 0.47 +0.1 3,415,420 - MPMX20_03245 0.51 -1.9 3,415,476 - MPMX20_03245 0.59 -1.5 3,415,476 - MPMX20_03245 0.59 -0.8 3,415,523 - MPMX20_03245 0.65 -0.1 3,415,529 + MPMX20_03245 0.65 -0.9 3,415,595 - MPMX20_03245 0.74 -1.5 3,415,681 - MPMX20_03245 0.85 -1.0 3,415,681 - MPMX20_03245 0.85 -2.8 3,415,696 - MPMX20_03245 0.87 -1.9 3,415,700 + MPMX20_03245 0.87 -0.9 3,415,703 - MPMX20_03245 0.88 -2.7 3,415,703 - MPMX20_03245 0.88 -0.4 3,415,718 - MPMX20_03245 0.90 -1.0 3,415,759 + -1.8 3,415,779 + -0.1 3,415,801 + +0.2 3,415,847 - -1.5 3,415,852 - -1.4 3,415,873 + -0.4 3,415,909 + -2.5 3,416,040 + -0.3 3,416,080 - +0.1 3,416,087 + -1.3 3,416,095 - +1.1 3,416,095 - +1.9 3,416,095 - +0.7 3,416,738 - +1.2 3,416,743 - -0.9 3,416,774 - -3.8
Or see this region's nucleotide sequence