Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03245

Experiment: 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03244 and MPMX20_03245 are separated by 226 nucleotidesMPMX20_03245 and MPMX20_03246 are separated by 290 nucleotidesMPMX20_03246 and MPMX20_03247 overlap by 1 nucleotides MPMX20_03244: MPMX20_03244 - Histidine-binding periplasmic protein, at 3,414,008 to 3,414,790 _03244 MPMX20_03245: MPMX20_03245 - Lysine/arginine/ornithine-binding periplasmic protein, at 3,415,017 to 3,415,799 _03245 MPMX20_03246: MPMX20_03246 - Flavin prenyltransferase UbiX, at 3,416,090 to 3,416,749 _03246 MPMX20_03247: MPMX20_03247 - Amidophosphoribosyltransferase, at 3,416,749 to 3,418,266 _03247 Position (kb) 3415 3416Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 3414.092 kb on + strand, within MPMX20_03244at 3414.105 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.219 kb on - strand, within MPMX20_03244at 3414.245 kb on - strand, within MPMX20_03244at 3414.278 kb on - strand, within MPMX20_03244at 3414.356 kb on + strand, within MPMX20_03244at 3414.368 kb on + strand, within MPMX20_03244at 3414.412 kb on - strand, within MPMX20_03244at 3414.429 kb on + strand, within MPMX20_03244at 3414.440 kb on + strand, within MPMX20_03244at 3414.448 kb on - strand, within MPMX20_03244at 3414.585 kb on + strand, within MPMX20_03244at 3414.619 kb on - strand, within MPMX20_03244at 3414.631 kb on - strand, within MPMX20_03244at 3414.687 kb on - strand, within MPMX20_03244at 3414.691 kb on + strand, within MPMX20_03244at 3414.699 kb on - strand, within MPMX20_03244at 3414.699 kb on - strand, within MPMX20_03244at 3414.832 kb on + strandat 3414.842 kb on + strandat 3414.842 kb on + strandat 3414.850 kb on - strandat 3414.862 kb on - strandat 3414.937 kb on + strandat 3414.945 kb on - strandat 3414.945 kb on - strandat 3415.007 kb on - strandat 3415.007 kb on - strandat 3415.230 kb on + strand, within MPMX20_03245at 3415.230 kb on + strand, within MPMX20_03245at 3415.286 kb on + strand, within MPMX20_03245at 3415.294 kb on - strand, within MPMX20_03245at 3415.299 kb on - strand, within MPMX20_03245at 3415.364 kb on - strand, within MPMX20_03245at 3415.378 kb on + strand, within MPMX20_03245at 3415.385 kb on - strand, within MPMX20_03245at 3415.420 kb on - strand, within MPMX20_03245at 3415.476 kb on - strand, within MPMX20_03245at 3415.476 kb on - strand, within MPMX20_03245at 3415.523 kb on - strand, within MPMX20_03245at 3415.529 kb on + strand, within MPMX20_03245at 3415.595 kb on - strand, within MPMX20_03245at 3415.681 kb on - strand, within MPMX20_03245at 3415.681 kb on - strand, within MPMX20_03245at 3415.696 kb on - strand, within MPMX20_03245at 3415.700 kb on + strand, within MPMX20_03245at 3415.703 kb on - strand, within MPMX20_03245at 3415.703 kb on - strand, within MPMX20_03245at 3415.718 kb on - strand, within MPMX20_03245at 3415.759 kb on + strandat 3415.779 kb on + strandat 3415.801 kb on + strandat 3415.847 kb on - strandat 3415.852 kb on - strandat 3415.873 kb on + strandat 3415.909 kb on + strandat 3416.040 kb on + strandat 3416.080 kb on - strandat 3416.087 kb on + strandat 3416.095 kb on - strandat 3416.095 kb on - strandat 3416.095 kb on - strandat 3416.738 kb on - strandat 3416.743 kb on - strandat 3416.774 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,414,092 + MPMX20_03244 0.11 -0.4
3,414,105 - MPMX20_03244 0.12 +2.3
3,414,138 - MPMX20_03244 0.17 +0.8
3,414,138 - MPMX20_03244 0.17 +0.1
3,414,138 - MPMX20_03244 0.17 -2.6
3,414,138 - MPMX20_03244 0.17 +0.3
3,414,219 - MPMX20_03244 0.27 -0.9
3,414,245 - MPMX20_03244 0.30 -0.3
3,414,278 - MPMX20_03244 0.34 +0.5
3,414,356 + MPMX20_03244 0.44 -0.2
3,414,368 + MPMX20_03244 0.46 -0.7
3,414,412 - MPMX20_03244 0.52 -0.1
3,414,429 + MPMX20_03244 0.54 +2.3
3,414,440 + MPMX20_03244 0.55 -1.8
3,414,448 - MPMX20_03244 0.56 +0.0
3,414,585 + MPMX20_03244 0.74 -3.3
3,414,619 - MPMX20_03244 0.78 -1.1
3,414,631 - MPMX20_03244 0.80 -0.5
3,414,687 - MPMX20_03244 0.87 -1.5
3,414,691 + MPMX20_03244 0.87 -1.6
3,414,699 - MPMX20_03244 0.88 +0.9
3,414,699 - MPMX20_03244 0.88 -0.2
3,414,832 + -0.8
3,414,842 + +0.1
3,414,842 + -3.1
3,414,850 - -1.5
3,414,862 - +1.6
3,414,937 + +0.0
3,414,945 - -0.5
3,414,945 - -1.9
3,415,007 - -2.2
3,415,007 - -1.1
3,415,230 + MPMX20_03245 0.27 -2.0
3,415,230 + MPMX20_03245 0.27 -0.3
3,415,286 + MPMX20_03245 0.34 -1.5
3,415,294 - MPMX20_03245 0.35 -2.2
3,415,299 - MPMX20_03245 0.36 -1.3
3,415,364 - MPMX20_03245 0.44 -1.2
3,415,378 + MPMX20_03245 0.46 -0.3
3,415,385 - MPMX20_03245 0.47 +0.1
3,415,420 - MPMX20_03245 0.51 -1.9
3,415,476 - MPMX20_03245 0.59 -1.5
3,415,476 - MPMX20_03245 0.59 -0.8
3,415,523 - MPMX20_03245 0.65 -0.1
3,415,529 + MPMX20_03245 0.65 -0.9
3,415,595 - MPMX20_03245 0.74 -1.5
3,415,681 - MPMX20_03245 0.85 -1.0
3,415,681 - MPMX20_03245 0.85 -2.8
3,415,696 - MPMX20_03245 0.87 -1.9
3,415,700 + MPMX20_03245 0.87 -0.9
3,415,703 - MPMX20_03245 0.88 -2.7
3,415,703 - MPMX20_03245 0.88 -0.4
3,415,718 - MPMX20_03245 0.90 -1.0
3,415,759 + -1.8
3,415,779 + -0.1
3,415,801 + +0.2
3,415,847 - -1.5
3,415,852 - -1.4
3,415,873 + -0.4
3,415,909 + -2.5
3,416,040 + -0.3
3,416,080 - +0.1
3,416,087 + -1.3
3,416,095 - +1.1
3,416,095 - +1.9
3,416,095 - +0.7
3,416,738 - +1.2
3,416,743 - -0.9
3,416,774 - -3.8

Or see this region's nucleotide sequence