Experiment: 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00641 and MPMX20_00642 overlap by 4 nucleotides MPMX20_00642 and MPMX20_00643 are separated by 269 nucleotides MPMX20_00643 and MPMX20_00644 overlap by 44 nucleotides
MPMX20_00641: MPMX20_00641 - NAD/NADP-dependent betaine aldehyde dehydrogenase, at 665,939 to 667,405
_00641
MPMX20_00642: MPMX20_00642 - Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase, at 667,402 to 668,679
_00642
MPMX20_00643: MPMX20_00643 - HTH-type transcriptional regulator FarR, at 668,949 to 669,389
_00643
MPMX20_00644: MPMX20_00644 - Methyl-accepting chemotaxis protein I, at 669,346 to 671,139
_00644
Position (kb) 667
668
669 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 666.421 kb on + strand, within MPMX20_00641 at 666.433 kb on + strand, within MPMX20_00641 at 666.472 kb on - strand, within MPMX20_00641 at 666.478 kb on + strand, within MPMX20_00641 at 666.562 kb on + strand, within MPMX20_00641 at 666.570 kb on + strand, within MPMX20_00641 at 666.578 kb on - strand, within MPMX20_00641 at 666.605 kb on - strand, within MPMX20_00641 at 666.605 kb on - strand, within MPMX20_00641 at 666.627 kb on - strand, within MPMX20_00641 at 666.673 kb on + strand, within MPMX20_00641 at 666.800 kb on + strand, within MPMX20_00641 at 666.800 kb on + strand, within MPMX20_00641 at 666.800 kb on + strand, within MPMX20_00641 at 666.800 kb on + strand, within MPMX20_00641 at 666.800 kb on + strand, within MPMX20_00641 at 666.808 kb on - strand, within MPMX20_00641 at 666.808 kb on - strand, within MPMX20_00641 at 666.808 kb on - strand, within MPMX20_00641 at 666.872 kb on - strand, within MPMX20_00641 at 666.883 kb on + strand, within MPMX20_00641 at 666.891 kb on - strand, within MPMX20_00641 at 666.891 kb on - strand, within MPMX20_00641 at 666.893 kb on + strand, within MPMX20_00641 at 666.924 kb on - strand, within MPMX20_00641 at 666.934 kb on + strand, within MPMX20_00641 at 666.956 kb on - strand, within MPMX20_00641 at 666.996 kb on - strand, within MPMX20_00641 at 667.006 kb on + strand, within MPMX20_00641 at 667.008 kb on + strand, within MPMX20_00641 at 667.009 kb on - strand, within MPMX20_00641 at 667.047 kb on + strand, within MPMX20_00641 at 667.157 kb on - strand, within MPMX20_00641 at 667.205 kb on + strand, within MPMX20_00641 at 667.321 kb on + strand at 667.336 kb on + strand at 667.336 kb on + strand at 667.344 kb on - strand at 667.499 kb on + strand at 667.593 kb on - strand, within MPMX20_00642 at 667.641 kb on + strand, within MPMX20_00642 at 667.641 kb on + strand, within MPMX20_00642 at 667.649 kb on - strand, within MPMX20_00642 at 667.655 kb on - strand, within MPMX20_00642 at 667.656 kb on + strand, within MPMX20_00642 at 667.728 kb on + strand, within MPMX20_00642 at 667.796 kb on + strand, within MPMX20_00642 at 667.804 kb on - strand, within MPMX20_00642 at 667.809 kb on - strand, within MPMX20_00642 at 667.817 kb on + strand, within MPMX20_00642 at 667.818 kb on + strand, within MPMX20_00642 at 667.883 kb on + strand, within MPMX20_00642 at 667.886 kb on - strand, within MPMX20_00642 at 667.886 kb on - strand, within MPMX20_00642 at 667.927 kb on + strand, within MPMX20_00642 at 667.927 kb on + strand, within MPMX20_00642 at 667.992 kb on - strand, within MPMX20_00642 at 668.007 kb on - strand, within MPMX20_00642 at 668.009 kb on + strand, within MPMX20_00642 at 668.017 kb on - strand, within MPMX20_00642 at 668.017 kb on - strand, within MPMX20_00642 at 668.031 kb on + strand, within MPMX20_00642 at 668.031 kb on + strand, within MPMX20_00642 at 668.031 kb on + strand, within MPMX20_00642 at 668.039 kb on - strand, within MPMX20_00642 at 668.039 kb on - strand, within MPMX20_00642 at 668.039 kb on - strand, within MPMX20_00642 at 668.123 kb on + strand, within MPMX20_00642 at 668.145 kb on + strand, within MPMX20_00642 at 668.153 kb on - strand, within MPMX20_00642 at 668.153 kb on - strand, within MPMX20_00642 at 668.217 kb on - strand, within MPMX20_00642 at 668.235 kb on + strand, within MPMX20_00642 at 668.243 kb on - strand, within MPMX20_00642 at 668.243 kb on - strand, within MPMX20_00642 at 668.251 kb on - strand, within MPMX20_00642 at 668.300 kb on - strand, within MPMX20_00642 at 668.331 kb on + strand, within MPMX20_00642 at 668.331 kb on + strand, within MPMX20_00642 at 668.462 kb on + strand, within MPMX20_00642 at 668.470 kb on - strand, within MPMX20_00642 at 668.523 kb on + strand, within MPMX20_00642 at 668.529 kb on - strand, within MPMX20_00642 at 668.531 kb on - strand, within MPMX20_00642 at 668.544 kb on + strand, within MPMX20_00642 at 668.551 kb on + strand, within MPMX20_00642 at 668.551 kb on + strand, within MPMX20_00642 at 668.599 kb on - strand at 668.624 kb on - strand at 668.682 kb on + strand at 668.902 kb on - strand at 669.039 kb on + strand, within MPMX20_00643 at 669.047 kb on - strand, within MPMX20_00643 at 669.160 kb on - strand, within MPMX20_00643 at 669.223 kb on + strand, within MPMX20_00643 at 669.238 kb on + strand, within MPMX20_00643 at 669.238 kb on + strand, within MPMX20_00643 at 669.246 kb on - strand, within MPMX20_00643 at 669.246 kb on - strand, within MPMX20_00643 at 669.250 kb on - strand, within MPMX20_00643 at 669.255 kb on - strand, within MPMX20_00643 at 669.348 kb on + strand at 669.370 kb on - strand at 669.370 kb on - strand at 669.370 kb on - strand at 669.511 kb on - strand at 669.511 kb on - strand at 669.548 kb on - strand, within MPMX20_00644 at 669.624 kb on + strand, within MPMX20_00644 at 669.644 kb on + strand, within MPMX20_00644 at 669.663 kb on - strand, within MPMX20_00644
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 666,421 + MPMX20_00641 0.33 -0.5 666,433 + MPMX20_00641 0.34 -1.3 666,472 - MPMX20_00641 0.36 -3.6 666,478 + MPMX20_00641 0.37 -2.9 666,562 + MPMX20_00641 0.42 -0.7 666,570 + MPMX20_00641 0.43 -0.6 666,578 - MPMX20_00641 0.44 -2.4 666,605 - MPMX20_00641 0.45 -0.9 666,605 - MPMX20_00641 0.45 -2.0 666,627 - MPMX20_00641 0.47 -0.8 666,673 + MPMX20_00641 0.50 +0.3 666,800 + MPMX20_00641 0.59 -1.0 666,800 + MPMX20_00641 0.59 -0.9 666,800 + MPMX20_00641 0.59 -1.0 666,800 + MPMX20_00641 0.59 -0.9 666,800 + MPMX20_00641 0.59 +0.2 666,808 - MPMX20_00641 0.59 -3.4 666,808 - MPMX20_00641 0.59 -3.4 666,808 - MPMX20_00641 0.59 -1.8 666,872 - MPMX20_00641 0.64 -1.2 666,883 + MPMX20_00641 0.64 -0.6 666,891 - MPMX20_00641 0.65 -2.4 666,891 - MPMX20_00641 0.65 -2.4 666,893 + MPMX20_00641 0.65 +2.5 666,924 - MPMX20_00641 0.67 -2.7 666,934 + MPMX20_00641 0.68 -1.5 666,956 - MPMX20_00641 0.69 -2.7 666,996 - MPMX20_00641 0.72 -0.2 667,006 + MPMX20_00641 0.73 +1.7 667,008 + MPMX20_00641 0.73 -2.0 667,009 - MPMX20_00641 0.73 -2.7 667,047 + MPMX20_00641 0.76 -2.1 667,157 - MPMX20_00641 0.83 +0.1 667,205 + MPMX20_00641 0.86 -0.9 667,321 + -0.2 667,336 + -0.8 667,336 + -0.7 667,344 - -0.1 667,499 + -0.6 667,593 - MPMX20_00642 0.15 -2.2 667,641 + MPMX20_00642 0.19 -2.1 667,641 + MPMX20_00642 0.19 -0.9 667,649 - MPMX20_00642 0.19 -2.8 667,655 - MPMX20_00642 0.20 -0.5 667,656 + MPMX20_00642 0.20 -0.2 667,728 + MPMX20_00642 0.26 +1.5 667,796 + MPMX20_00642 0.31 -0.7 667,804 - MPMX20_00642 0.31 -0.7 667,809 - MPMX20_00642 0.32 +0.9 667,817 + MPMX20_00642 0.32 -0.3 667,818 + MPMX20_00642 0.33 -0.5 667,883 + MPMX20_00642 0.38 -1.3 667,886 - MPMX20_00642 0.38 -3.7 667,886 - MPMX20_00642 0.38 +1.2 667,927 + MPMX20_00642 0.41 -0.4 667,927 + MPMX20_00642 0.41 +1.0 667,992 - MPMX20_00642 0.46 +0.4 668,007 - MPMX20_00642 0.47 +0.2 668,009 + MPMX20_00642 0.47 +0.5 668,017 - MPMX20_00642 0.48 -0.6 668,017 - MPMX20_00642 0.48 -1.4 668,031 + MPMX20_00642 0.49 +0.5 668,031 + MPMX20_00642 0.49 +1.2 668,031 + MPMX20_00642 0.49 +1.2 668,039 - MPMX20_00642 0.50 -1.8 668,039 - MPMX20_00642 0.50 -0.4 668,039 - MPMX20_00642 0.50 -1.9 668,123 + MPMX20_00642 0.56 -0.1 668,145 + MPMX20_00642 0.58 +0.9 668,153 - MPMX20_00642 0.59 -1.4 668,153 - MPMX20_00642 0.59 +1.2 668,217 - MPMX20_00642 0.64 -1.4 668,235 + MPMX20_00642 0.65 +0.2 668,243 - MPMX20_00642 0.66 +0.6 668,243 - MPMX20_00642 0.66 +1.0 668,251 - MPMX20_00642 0.66 -0.8 668,300 - MPMX20_00642 0.70 +0.8 668,331 + MPMX20_00642 0.73 -2.0 668,331 + MPMX20_00642 0.73 +0.9 668,462 + MPMX20_00642 0.83 -0.3 668,470 - MPMX20_00642 0.84 +0.4 668,523 + MPMX20_00642 0.88 +0.5 668,529 - MPMX20_00642 0.88 +0.6 668,531 - MPMX20_00642 0.88 +0.3 668,544 + MPMX20_00642 0.89 -1.4 668,551 + MPMX20_00642 0.90 +0.2 668,551 + MPMX20_00642 0.90 +0.4 668,599 - +0.5 668,624 - +0.2 668,682 + -0.8 668,902 - -0.6 669,039 + MPMX20_00643 0.20 -1.7 669,047 - MPMX20_00643 0.22 +2.7 669,160 - MPMX20_00643 0.48 -0.5 669,223 + MPMX20_00643 0.62 -0.7 669,238 + MPMX20_00643 0.66 -1.5 669,238 + MPMX20_00643 0.66 -0.4 669,246 - MPMX20_00643 0.67 -0.8 669,246 - MPMX20_00643 0.67 +0.2 669,250 - MPMX20_00643 0.68 -0.4 669,255 - MPMX20_00643 0.69 +0.2 669,348 + -0.2 669,370 - -0.1 669,370 - -0.8 669,370 - -2.5 669,511 - +2.2 669,511 - -0.4 669,548 - MPMX20_00644 0.11 +2.2 669,624 + MPMX20_00644 0.15 -1.7 669,644 + MPMX20_00644 0.17 -1.7 669,663 - MPMX20_00644 0.18 +1.5
Or see this region's nucleotide sequence