Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04574

Experiment: TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04571 and MPMX20_04572 overlap by 1 nucleotidesMPMX20_04572 and MPMX20_04573 are separated by 41 nucleotidesMPMX20_04573 and MPMX20_04574 are separated by 114 nucleotidesMPMX20_04574 and MPMX20_04575 are separated by 383 nucleotides MPMX20_04571: MPMX20_04571 - hypothetical protein, at 4,783,951 to 4,784,610 _04571 MPMX20_04572: MPMX20_04572 - hypothetical protein, at 4,784,610 to 4,784,933 _04572 MPMX20_04573: MPMX20_04573 - hypothetical protein, at 4,784,975 to 4,785,187 _04573 MPMX20_04574: MPMX20_04574 - Sulfur carrier protein FdhD, at 4,785,302 to 4,786,138 _04574 MPMX20_04575: MPMX20_04575 - Formate dehydrogenase-O major subunit, at 4,786,522 to 4,787,109 _04575 Position (kb) 4785 4786 4787Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 4784.322 kb on + strand, within MPMX20_04571at 4784.330 kb on - strand, within MPMX20_04571at 4784.330 kb on - strand, within MPMX20_04571at 4784.386 kb on - strand, within MPMX20_04571at 4784.497 kb on + strand, within MPMX20_04571at 4784.497 kb on + strand, within MPMX20_04571at 4784.497 kb on + strand, within MPMX20_04571at 4784.505 kb on - strand, within MPMX20_04571at 4784.505 kb on - strand, within MPMX20_04571at 4784.506 kb on - strand, within MPMX20_04571at 4784.519 kb on + strand, within MPMX20_04571at 4784.519 kb on + strand, within MPMX20_04571at 4784.569 kb on + strandat 4784.588 kb on + strandat 4784.588 kb on + strandat 4784.588 kb on + strandat 4784.591 kb on - strandat 4784.728 kb on - strand, within MPMX20_04572at 4784.732 kb on + strand, within MPMX20_04572at 4784.740 kb on - strand, within MPMX20_04572at 4784.782 kb on - strand, within MPMX20_04572at 4784.786 kb on + strand, within MPMX20_04572at 4784.786 kb on + strand, within MPMX20_04572at 4784.794 kb on - strand, within MPMX20_04572at 4784.843 kb on + strand, within MPMX20_04572at 4784.843 kb on + strand, within MPMX20_04572at 4784.851 kb on - strand, within MPMX20_04572at 4784.912 kb on - strandat 4784.965 kb on + strandat 4784.986 kb on + strandat 4784.994 kb on - strandat 4784.994 kb on - strandat 4784.998 kb on + strand, within MPMX20_04573at 4785.006 kb on - strand, within MPMX20_04573at 4785.020 kb on + strand, within MPMX20_04573at 4785.033 kb on - strand, within MPMX20_04573at 4785.054 kb on + strand, within MPMX20_04573at 4785.054 kb on + strand, within MPMX20_04573at 4785.054 kb on + strand, within MPMX20_04573at 4785.054 kb on + strand, within MPMX20_04573at 4785.062 kb on - strand, within MPMX20_04573at 4785.062 kb on - strand, within MPMX20_04573at 4785.062 kb on - strand, within MPMX20_04573at 4785.062 kb on - strand, within MPMX20_04573at 4785.096 kb on + strand, within MPMX20_04573at 4785.387 kb on - strand, within MPMX20_04574at 4785.389 kb on + strand, within MPMX20_04574at 4785.391 kb on + strand, within MPMX20_04574at 4785.391 kb on + strand, within MPMX20_04574at 4785.452 kb on - strand, within MPMX20_04574at 4785.479 kb on - strand, within MPMX20_04574at 4785.507 kb on - strand, within MPMX20_04574at 4785.507 kb on - strand, within MPMX20_04574at 4785.557 kb on - strand, within MPMX20_04574at 4785.557 kb on - strand, within MPMX20_04574at 4785.665 kb on - strand, within MPMX20_04574at 4785.666 kb on + strand, within MPMX20_04574at 4785.684 kb on - strand, within MPMX20_04574at 4785.711 kb on - strand, within MPMX20_04574at 4785.730 kb on - strand, within MPMX20_04574at 4785.760 kb on + strand, within MPMX20_04574at 4785.768 kb on - strand, within MPMX20_04574at 4785.856 kb on + strand, within MPMX20_04574at 4785.864 kb on - strand, within MPMX20_04574at 4785.864 kb on - strand, within MPMX20_04574at 4785.952 kb on + strand, within MPMX20_04574at 4786.004 kb on + strand, within MPMX20_04574at 4786.007 kb on - strand, within MPMX20_04574at 4786.063 kb on - strandat 4786.136 kb on - strandat 4786.157 kb on + strandat 4786.157 kb on + strandat 4786.157 kb on + strandat 4786.391 kb on - strandat 4786.452 kb on - strandat 4786.463 kb on + strandat 4786.493 kb on - strandat 4786.525 kb on - strandat 4786.527 kb on + strandat 4786.527 kb on + strandat 4786.527 kb on + strandat 4786.532 kb on + strandat 4786.535 kb on - strandat 4786.540 kb on - strandat 4786.607 kb on + strand, within MPMX20_04575at 4786.617 kb on + strand, within MPMX20_04575at 4786.647 kb on - strand, within MPMX20_04575at 4786.657 kb on - strand, within MPMX20_04575at 4786.675 kb on - strand, within MPMX20_04575at 4786.682 kb on - strand, within MPMX20_04575at 4786.704 kb on - strand, within MPMX20_04575at 4786.752 kb on + strand, within MPMX20_04575at 4786.762 kb on + strand, within MPMX20_04575at 4786.805 kb on + strand, within MPMX20_04575at 4786.805 kb on - strand, within MPMX20_04575at 4786.828 kb on - strand, within MPMX20_04575at 4786.837 kb on - strand, within MPMX20_04575at 4786.919 kb on + strand, within MPMX20_04575at 4786.929 kb on + strand, within MPMX20_04575at 4786.937 kb on - strand, within MPMX20_04575at 4786.967 kb on + strand, within MPMX20_04575at 4787.000 kb on + strand, within MPMX20_04575at 4787.005 kb on + strand, within MPMX20_04575at 4787.021 kb on - strand, within MPMX20_04575at 4787.094 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,784,322 + MPMX20_04571 0.56 -0.5
4,784,330 - MPMX20_04571 0.57 -1.0
4,784,330 - MPMX20_04571 0.57 +1.1
4,784,386 - MPMX20_04571 0.66 +1.6
4,784,497 + MPMX20_04571 0.83 +0.4
4,784,497 + MPMX20_04571 0.83 -0.0
4,784,497 + MPMX20_04571 0.83 +0.4
4,784,505 - MPMX20_04571 0.84 +1.8
4,784,505 - MPMX20_04571 0.84 -2.1
4,784,506 - MPMX20_04571 0.84 +0.4
4,784,519 + MPMX20_04571 0.86 +1.8
4,784,519 + MPMX20_04571 0.86 +1.0
4,784,569 + -0.0
4,784,588 + +0.1
4,784,588 + +0.9
4,784,588 + +0.8
4,784,591 - +0.1
4,784,728 - MPMX20_04572 0.36 +0.2
4,784,732 + MPMX20_04572 0.38 +1.1
4,784,740 - MPMX20_04572 0.40 -0.9
4,784,782 - MPMX20_04572 0.53 +1.2
4,784,786 + MPMX20_04572 0.54 +3.0
4,784,786 + MPMX20_04572 0.54 +0.4
4,784,794 - MPMX20_04572 0.57 -0.0
4,784,843 + MPMX20_04572 0.72 -0.3
4,784,843 + MPMX20_04572 0.72 +0.6
4,784,851 - MPMX20_04572 0.74 -1.2
4,784,912 - -0.8
4,784,965 + +0.8
4,784,986 + +0.6
4,784,994 - -1.1
4,784,994 - +2.5
4,784,998 + MPMX20_04573 0.11 +2.0
4,785,006 - MPMX20_04573 0.15 -0.4
4,785,020 + MPMX20_04573 0.21 -1.4
4,785,033 - MPMX20_04573 0.27 -0.8
4,785,054 + MPMX20_04573 0.37 -0.4
4,785,054 + MPMX20_04573 0.37 -1.7
4,785,054 + MPMX20_04573 0.37 +0.7
4,785,054 + MPMX20_04573 0.37 -0.4
4,785,062 - MPMX20_04573 0.41 +1.3
4,785,062 - MPMX20_04573 0.41 +0.7
4,785,062 - MPMX20_04573 0.41 -0.9
4,785,062 - MPMX20_04573 0.41 +1.5
4,785,096 + MPMX20_04573 0.57 +3.0
4,785,387 - MPMX20_04574 0.10 +1.4
4,785,389 + MPMX20_04574 0.10 +2.7
4,785,391 + MPMX20_04574 0.11 +0.7
4,785,391 + MPMX20_04574 0.11 -0.6
4,785,452 - MPMX20_04574 0.18 +0.8
4,785,479 - MPMX20_04574 0.21 +0.6
4,785,507 - MPMX20_04574 0.24 +0.2
4,785,507 - MPMX20_04574 0.24 -1.1
4,785,557 - MPMX20_04574 0.30 +6.6
4,785,557 - MPMX20_04574 0.30 +1.5
4,785,665 - MPMX20_04574 0.43 +0.8
4,785,666 + MPMX20_04574 0.43 -0.8
4,785,684 - MPMX20_04574 0.46 -0.7
4,785,711 - MPMX20_04574 0.49 -1.7
4,785,730 - MPMX20_04574 0.51 +0.4
4,785,760 + MPMX20_04574 0.55 +2.4
4,785,768 - MPMX20_04574 0.56 +1.1
4,785,856 + MPMX20_04574 0.66 -0.4
4,785,864 - MPMX20_04574 0.67 -0.2
4,785,864 - MPMX20_04574 0.67 +0.2
4,785,952 + MPMX20_04574 0.78 +0.2
4,786,004 + MPMX20_04574 0.84 +0.0
4,786,007 - MPMX20_04574 0.84 +0.4
4,786,063 - +0.7
4,786,136 - -1.6
4,786,157 + +0.2
4,786,157 + -0.4
4,786,157 + -0.2
4,786,391 - +1.2
4,786,452 - +1.3
4,786,463 + +5.1
4,786,493 - +1.4
4,786,525 - -0.4
4,786,527 + -0.8
4,786,527 + +0.6
4,786,527 + +0.4
4,786,532 + +0.4
4,786,535 - -2.7
4,786,540 - +0.4
4,786,607 + MPMX20_04575 0.14 -1.0
4,786,617 + MPMX20_04575 0.16 +3.0
4,786,647 - MPMX20_04575 0.21 +0.1
4,786,657 - MPMX20_04575 0.23 -1.0
4,786,675 - MPMX20_04575 0.26 -1.9
4,786,682 - MPMX20_04575 0.27 -0.0
4,786,704 - MPMX20_04575 0.31 +0.8
4,786,752 + MPMX20_04575 0.39 +0.4
4,786,762 + MPMX20_04575 0.41 -0.4
4,786,805 + MPMX20_04575 0.48 -1.4
4,786,805 - MPMX20_04575 0.48 -0.4
4,786,828 - MPMX20_04575 0.52 -0.5
4,786,837 - MPMX20_04575 0.54 +0.3
4,786,919 + MPMX20_04575 0.68 +1.0
4,786,929 + MPMX20_04575 0.69 +1.7
4,786,937 - MPMX20_04575 0.71 -1.0
4,786,967 + MPMX20_04575 0.76 -2.0
4,787,000 + MPMX20_04575 0.81 +0.8
4,787,005 + MPMX20_04575 0.82 -0.5
4,787,021 - MPMX20_04575 0.85 -0.4
4,787,094 - -1.0

Or see this region's nucleotide sequence