Experiment: TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03832 and MPMX20_03833 are separated by 255 nucleotides MPMX20_03833 and MPMX20_03834 are separated by 95 nucleotides MPMX20_03834 and MPMX20_03835 are separated by 361 nucleotides
MPMX20_03832: MPMX20_03832 - Constitutive ornithine decarboxylase, at 4,034,289 to 4,036,424
_03832
MPMX20_03833: MPMX20_03833 - putative membrane protein YdfK, at 4,036,680 to 4,037,393
_03833
MPMX20_03834: MPMX20_03834 - tRNA-Phe, at 4,037,489 to 4,037,564
_03834
MPMX20_03835: MPMX20_03835 - hypothetical protein, at 4,037,926 to 4,038,231
_03835
Position (kb)
4036
4037
4038 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4035.753 kb on - strand, within MPMX20_03832 at 4035.758 kb on - strand, within MPMX20_03832 at 4035.797 kb on + strand, within MPMX20_03832 at 4035.805 kb on - strand, within MPMX20_03832 at 4035.813 kb on + strand, within MPMX20_03832 at 4035.852 kb on + strand, within MPMX20_03832 at 4035.868 kb on + strand, within MPMX20_03832 at 4035.876 kb on - strand, within MPMX20_03832 at 4035.906 kb on + strand, within MPMX20_03832 at 4035.924 kb on - strand, within MPMX20_03832 at 4035.936 kb on + strand, within MPMX20_03832 at 4035.964 kb on + strand, within MPMX20_03832 at 4035.964 kb on + strand, within MPMX20_03832 at 4035.964 kb on + strand, within MPMX20_03832 at 4035.964 kb on + strand, within MPMX20_03832 at 4035.972 kb on - strand, within MPMX20_03832 at 4036.058 kb on + strand, within MPMX20_03832 at 4036.068 kb on + strand, within MPMX20_03832 at 4036.073 kb on + strand, within MPMX20_03832 at 4036.076 kb on - strand, within MPMX20_03832 at 4036.078 kb on + strand, within MPMX20_03832 at 4036.100 kb on + strand, within MPMX20_03832 at 4036.100 kb on + strand, within MPMX20_03832 at 4036.108 kb on - strand, within MPMX20_03832 at 4036.108 kb on - strand, within MPMX20_03832 at 4036.173 kb on + strand, within MPMX20_03832 at 4036.188 kb on - strand, within MPMX20_03832 at 4036.267 kb on + strand at 4036.275 kb on - strand at 4036.311 kb on + strand at 4036.319 kb on - strand at 4036.347 kb on + strand at 4036.379 kb on - strand at 4036.381 kb on + strand at 4036.381 kb on + strand at 4036.381 kb on + strand at 4036.381 kb on + strand at 4036.381 kb on + strand at 4036.389 kb on - strand at 4036.389 kb on - strand at 4036.389 kb on - strand at 4036.389 kb on - strand at 4036.389 kb on - strand at 4036.391 kb on + strand at 4036.399 kb on - strand at 4036.438 kb on - strand at 4036.455 kb on - strand at 4036.465 kb on - strand at 4036.503 kb on - strand at 4036.521 kb on + strand at 4036.524 kb on + strand at 4036.553 kb on + strand at 4036.568 kb on - strand at 4036.574 kb on - strand at 4036.594 kb on + strand at 4036.594 kb on + strand at 4036.594 kb on + strand at 4036.594 kb on + strand at 4036.594 kb on + strand at 4036.594 kb on + strand at 4036.602 kb on - strand at 4036.602 kb on - strand at 4036.602 kb on - strand at 4036.604 kb on + strand at 4036.609 kb on + strand at 4036.609 kb on + strand at 4036.612 kb on - strand at 4036.616 kb on + strand at 4036.617 kb on - strand at 4036.626 kb on + strand at 4036.626 kb on + strand at 4036.632 kb on - strand at 4036.634 kb on - strand at 4036.634 kb on - strand at 4036.634 kb on - strand at 4036.664 kb on - strand at 4036.671 kb on - strand at 4036.671 kb on - strand at 4036.671 kb on - strand at 4036.693 kb on - strand at 4036.784 kb on - strand, within MPMX20_03833 at 4036.784 kb on - strand, within MPMX20_03833 at 4036.794 kb on + strand, within MPMX20_03833 at 4036.861 kb on + strand, within MPMX20_03833 at 4036.861 kb on + strand, within MPMX20_03833 at 4036.869 kb on - strand, within MPMX20_03833 at 4036.869 kb on - strand, within MPMX20_03833 at 4036.874 kb on - strand, within MPMX20_03833 at 4036.919 kb on - strand, within MPMX20_03833 at 4036.997 kb on + strand, within MPMX20_03833 at 4037.005 kb on - strand, within MPMX20_03833 at 4037.055 kb on + strand, within MPMX20_03833 at 4037.086 kb on - strand, within MPMX20_03833 at 4037.170 kb on + strand, within MPMX20_03833 at 4037.206 kb on + strand, within MPMX20_03833 at 4037.206 kb on + strand, within MPMX20_03833 at 4037.211 kb on + strand, within MPMX20_03833 at 4037.216 kb on + strand, within MPMX20_03833 at 4037.219 kb on - strand, within MPMX20_03833 at 4037.220 kb on - strand, within MPMX20_03833 at 4037.284 kb on + strand, within MPMX20_03833 at 4037.393 kb on + strand at 4037.408 kb on + strand at 4037.425 kb on - strand at 4037.456 kb on + strand at 4037.464 kb on - strand at 4037.640 kb on + strand at 4037.642 kb on + strand at 4037.700 kb on - strand at 4037.731 kb on - strand at 4037.752 kb on - strand at 4037.762 kb on - strand at 4037.764 kb on - strand at 4037.766 kb on + strand at 4037.766 kb on + strand at 4037.766 kb on + strand at 4037.766 kb on + strand at 4037.766 kb on + strand at 4037.769 kb on - strand at 4037.802 kb on - strand at 4037.802 kb on - strand at 4037.845 kb on + strand at 4037.850 kb on + strand at 4037.858 kb on - strand at 4037.870 kb on - strand at 4037.870 kb on - strand at 4037.873 kb on + strand at 4037.873 kb on + strand at 4037.956 kb on + strand at 4037.956 kb on + strand at 4037.969 kb on + strand, within MPMX20_03835 at 4037.976 kb on + strand, within MPMX20_03835 at 4037.996 kb on + strand, within MPMX20_03835 at 4037.996 kb on + strand, within MPMX20_03835 at 4037.996 kb on + strand, within MPMX20_03835 at 4037.996 kb on + strand, within MPMX20_03835 at 4038.002 kb on + strand, within MPMX20_03835 at 4038.004 kb on - strand, within MPMX20_03835 at 4038.004 kb on - strand, within MPMX20_03835 at 4038.004 kb on - strand, within MPMX20_03835 at 4038.055 kb on + strand, within MPMX20_03835 at 4038.113 kb on + strand, within MPMX20_03835 at 4038.120 kb on - strand, within MPMX20_03835 at 4038.140 kb on + strand, within MPMX20_03835 at 4038.140 kb on + strand, within MPMX20_03835 at 4038.158 kb on + strand, within MPMX20_03835 at 4038.164 kb on + strand, within MPMX20_03835 at 4038.166 kb on - strand, within MPMX20_03835 at 4038.169 kb on + strand, within MPMX20_03835 at 4038.169 kb on + strand, within MPMX20_03835 at 4038.169 kb on + strand, within MPMX20_03835 at 4038.169 kb on + strand, within MPMX20_03835 at 4038.177 kb on - strand, within MPMX20_03835 at 4038.177 kb on - strand, within MPMX20_03835 at 4038.177 kb on - strand, within MPMX20_03835 at 4038.177 kb on - strand, within MPMX20_03835 at 4038.258 kb on + strand at 4038.266 kb on - strand at 4038.287 kb on - strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.345 kb on + strand at 4038.352 kb on + strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.353 kb on - strand at 4038.358 kb on + strand at 4038.358 kb on - strand at 4038.358 kb on - strand at 4038.358 kb on - strand at 4038.360 kb on - strand at 4038.366 kb on + strand at 4038.366 kb on + strand at 4038.367 kb on - strand at 4038.367 kb on - strand at 4038.371 kb on + strand at 4038.381 kb on - strand at 4038.387 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,035,753 - MPMX20_03832 0.69 +0.2 4,035,758 - MPMX20_03832 0.69 +0.6 4,035,797 + MPMX20_03832 0.71 +3.6 4,035,805 - MPMX20_03832 0.71 +1.4 4,035,813 + MPMX20_03832 0.71 +0.4 4,035,852 + MPMX20_03832 0.73 +0.2 4,035,868 + MPMX20_03832 0.74 +0.5 4,035,876 - MPMX20_03832 0.74 +0.2 4,035,906 + MPMX20_03832 0.76 +0.4 4,035,924 - MPMX20_03832 0.77 -0.9 4,035,936 + MPMX20_03832 0.77 +2.0 4,035,964 + MPMX20_03832 0.78 -1.0 4,035,964 + MPMX20_03832 0.78 -1.4 4,035,964 + MPMX20_03832 0.78 +0.6 4,035,964 + MPMX20_03832 0.78 -0.2 4,035,972 - MPMX20_03832 0.79 -2.0 4,036,058 + MPMX20_03832 0.83 -1.6 4,036,068 + MPMX20_03832 0.83 +0.4 4,036,073 + MPMX20_03832 0.84 +2.3 4,036,076 - MPMX20_03832 0.84 -0.4 4,036,078 + MPMX20_03832 0.84 +0.7 4,036,100 + MPMX20_03832 0.85 -0.1 4,036,100 + MPMX20_03832 0.85 +1.1 4,036,108 - MPMX20_03832 0.85 -2.0 4,036,108 - MPMX20_03832 0.85 +1.0 4,036,173 + MPMX20_03832 0.88 -2.1 4,036,188 - MPMX20_03832 0.89 +3.1 4,036,267 + +0.8 4,036,275 - +0.4 4,036,311 + -1.7 4,036,319 - +0.4 4,036,347 + -1.7 4,036,379 - +1.5 4,036,381 + -1.8 4,036,381 + +2.2 4,036,381 + -0.1 4,036,381 + +3.0 4,036,381 + +4.0 4,036,389 - +0.9 4,036,389 - +0.4 4,036,389 - -1.2 4,036,389 - +0.4 4,036,389 - -1.7 4,036,391 + +0.6 4,036,399 - +1.5 4,036,438 - +1.4 4,036,455 - +0.1 4,036,465 - -0.1 4,036,503 - -0.8 4,036,521 + -0.6 4,036,524 + +0.1 4,036,553 + -0.3 4,036,568 - +1.3 4,036,574 - -0.2 4,036,594 + -1.5 4,036,594 + +0.4 4,036,594 + +0.5 4,036,594 + +0.2 4,036,594 + +1.4 4,036,594 + +0.4 4,036,602 - +0.7 4,036,602 - -0.9 4,036,602 - +0.0 4,036,604 + -0.5 4,036,609 + +0.1 4,036,609 + +2.5 4,036,612 - +0.0 4,036,616 + +1.0 4,036,617 - -0.4 4,036,626 + -2.0 4,036,626 + -0.1 4,036,632 - +1.3 4,036,634 - +0.1 4,036,634 - -0.1 4,036,634 - -0.9 4,036,664 - +1.2 4,036,671 - +0.2 4,036,671 - -0.3 4,036,671 - -0.8 4,036,693 - +0.8 4,036,784 - MPMX20_03833 0.15 +1.0 4,036,784 - MPMX20_03833 0.15 -0.1 4,036,794 + MPMX20_03833 0.16 -1.7 4,036,861 + MPMX20_03833 0.25 -0.8 4,036,861 + MPMX20_03833 0.25 -0.4 4,036,869 - MPMX20_03833 0.26 -0.8 4,036,869 - MPMX20_03833 0.26 -0.8 4,036,874 - MPMX20_03833 0.27 -0.9 4,036,919 - MPMX20_03833 0.33 -0.7 4,036,997 + MPMX20_03833 0.44 -1.0 4,037,005 - MPMX20_03833 0.46 +1.0 4,037,055 + MPMX20_03833 0.53 -2.6 4,037,086 - MPMX20_03833 0.57 -1.1 4,037,170 + MPMX20_03833 0.69 -0.2 4,037,206 + MPMX20_03833 0.74 -0.1 4,037,206 + MPMX20_03833 0.74 -0.3 4,037,211 + MPMX20_03833 0.74 -1.9 4,037,216 + MPMX20_03833 0.75 -0.7 4,037,219 - MPMX20_03833 0.75 -2.6 4,037,220 - MPMX20_03833 0.76 -0.2 4,037,284 + MPMX20_03833 0.85 -0.8 4,037,393 + -0.2 4,037,408 + +2.0 4,037,425 - +0.8 4,037,456 + -0.9 4,037,464 - -0.6 4,037,640 + -1.7 4,037,642 + -0.6 4,037,700 - +0.4 4,037,731 - -1.0 4,037,752 - +1.4 4,037,762 - -0.7 4,037,764 - -0.6 4,037,766 + +1.0 4,037,766 + +1.4 4,037,766 + +1.0 4,037,766 + -0.9 4,037,766 + -0.6 4,037,769 - -1.1 4,037,802 - +0.3 4,037,802 - +1.0 4,037,845 + -0.2 4,037,850 + -0.1 4,037,858 - +0.0 4,037,870 - -0.4 4,037,870 - +2.0 4,037,873 + +0.2 4,037,873 + -1.5 4,037,956 + +2.8 4,037,956 + -0.1 4,037,969 + MPMX20_03835 0.14 +1.0 4,037,976 + MPMX20_03835 0.16 -0.6 4,037,996 + MPMX20_03835 0.23 -0.6 4,037,996 + MPMX20_03835 0.23 -0.4 4,037,996 + MPMX20_03835 0.23 -0.2 4,037,996 + MPMX20_03835 0.23 +0.1 4,038,002 + MPMX20_03835 0.25 -0.6 4,038,004 - MPMX20_03835 0.25 -3.4 4,038,004 - MPMX20_03835 0.25 -2.4 4,038,004 - MPMX20_03835 0.25 +0.7 4,038,055 + MPMX20_03835 0.42 +0.6 4,038,113 + MPMX20_03835 0.61 -0.6 4,038,120 - MPMX20_03835 0.63 -1.5 4,038,140 + MPMX20_03835 0.70 +0.4 4,038,140 + MPMX20_03835 0.70 -3.2 4,038,158 + MPMX20_03835 0.76 -0.4 4,038,164 + MPMX20_03835 0.78 +0.5 4,038,166 - MPMX20_03835 0.78 +1.3 4,038,169 + MPMX20_03835 0.79 -0.6 4,038,169 + MPMX20_03835 0.79 +0.0 4,038,169 + MPMX20_03835 0.79 -0.7 4,038,169 + MPMX20_03835 0.79 +0.3 4,038,177 - MPMX20_03835 0.82 +0.0 4,038,177 - MPMX20_03835 0.82 +0.2 4,038,177 - MPMX20_03835 0.82 +1.2 4,038,177 - MPMX20_03835 0.82 -0.6 4,038,258 + +0.8 4,038,266 - +0.0 4,038,287 - +1.0 4,038,345 + +0.0 4,038,345 + +1.0 4,038,345 + +1.4 4,038,345 + -1.1 4,038,345 + -1.9 4,038,345 + +4.2 4,038,345 + +2.0 4,038,345 + -1.2 4,038,345 + -1.3 4,038,345 + +2.0 4,038,345 + +1.4 4,038,345 + +0.4 4,038,345 + +0.4 4,038,345 + +0.0 4,038,345 + +0.4 4,038,345 + +1.3 4,038,345 + -0.9 4,038,345 + +0.4 4,038,345 + -0.8 4,038,345 + +1.0 4,038,352 + +2.0 4,038,353 - +0.2 4,038,353 - +0.6 4,038,353 - +0.7 4,038,353 - -0.1 4,038,353 - +0.2 4,038,353 - +1.8 4,038,353 - -1.9 4,038,353 - -0.9 4,038,353 - -0.9 4,038,353 - +0.6 4,038,353 - +3.6 4,038,353 - +1.0 4,038,353 - -0.7 4,038,353 - -0.7 4,038,353 - +2.6 4,038,353 - -1.7 4,038,353 - -0.2 4,038,353 - -0.8 4,038,353 - -0.0 4,038,353 - +0.4 4,038,353 - +1.0 4,038,353 - -0.6 4,038,353 - -1.7 4,038,353 - -2.7 4,038,353 - +0.0 4,038,353 - +0.7 4,038,353 - +4.1 4,038,353 - +0.6 4,038,353 - -0.8 4,038,353 - -0.3 4,038,353 - +0.4 4,038,353 - -3.1 4,038,353 - +0.4 4,038,353 - -0.1 4,038,353 - +2.0 4,038,353 - -0.3 4,038,353 - -0.1 4,038,353 - +0.0 4,038,353 - +0.1 4,038,353 - +0.6 4,038,353 - +0.1 4,038,353 - +0.3 4,038,353 - +0.5 4,038,353 - +1.0 4,038,353 - -0.3 4,038,353 - +0.0 4,038,353 - -0.1 4,038,353 - +0.8 4,038,353 - -1.9 4,038,353 - +0.6 4,038,353 - +0.6 4,038,353 - +0.4 4,038,353 - -2.9 4,038,353 - +1.4 4,038,353 - -0.6 4,038,353 - +0.4 4,038,353 - +0.9 4,038,353 - -0.6 4,038,353 - +1.0 4,038,353 - +0.4 4,038,353 - -1.4 4,038,353 - +0.8 4,038,353 - -1.4 4,038,353 - +0.4 4,038,353 - -0.9 4,038,353 - -1.3 4,038,353 - +0.8 4,038,353 - +0.3 4,038,353 - +1.9 4,038,353 - -0.4 4,038,353 - -1.0 4,038,353 - +0.0 4,038,353 - -0.6 4,038,353 - -0.6 4,038,353 - +0.4 4,038,353 - -0.1 4,038,353 - +0.6 4,038,353 - -1.1 4,038,353 - +1.0 4,038,353 - -0.1 4,038,353 - -0.9 4,038,353 - +3.0 4,038,353 - +1.3 4,038,353 - -0.4 4,038,353 - -0.2 4,038,353 - +0.7 4,038,353 - +0.7 4,038,358 + +0.4 4,038,358 - -1.6 4,038,358 - -0.6 4,038,358 - +0.9 4,038,360 - +0.7 4,038,366 + +0.8 4,038,366 + +2.0 4,038,367 - -1.3 4,038,367 - +1.6 4,038,371 + +1.3 4,038,381 - +2.3 4,038,387 - +1.0
Or see this region's nucleotide sequence