Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03371

Experiment: TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03370 and MPMX20_03371 are separated by 11 nucleotidesMPMX20_03371 and MPMX20_03372 are separated by 54 nucleotides MPMX20_03370: MPMX20_03370 - Ribose import permease protein RbsC, at 3,546,895 to 3,547,923 _03370 MPMX20_03371: MPMX20_03371 - Ribose import ATP-binding protein RbsA, at 3,547,935 to 3,549,482 _03371 MPMX20_03372: MPMX20_03372 - Ribose import binding protein RbsB, at 3,549,537 to 3,550,466 _03372 Position (kb) 3547 3548 3549 3550Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 3546.984 kb on - strandat 3546.991 kb on - strandat 3547.007 kb on - strand, within MPMX20_03370at 3547.033 kb on - strand, within MPMX20_03370at 3547.057 kb on - strand, within MPMX20_03370at 3547.067 kb on - strand, within MPMX20_03370at 3547.069 kb on - strand, within MPMX20_03370at 3547.103 kb on - strand, within MPMX20_03370at 3547.116 kb on + strand, within MPMX20_03370at 3547.116 kb on + strand, within MPMX20_03370at 3547.116 kb on + strand, within MPMX20_03370at 3547.124 kb on - strand, within MPMX20_03370at 3547.124 kb on - strand, within MPMX20_03370at 3547.124 kb on - strand, within MPMX20_03370at 3547.140 kb on + strand, within MPMX20_03370at 3547.150 kb on + strand, within MPMX20_03370at 3547.150 kb on + strand, within MPMX20_03370at 3547.158 kb on - strand, within MPMX20_03370at 3547.158 kb on - strand, within MPMX20_03370at 3547.158 kb on - strand, within MPMX20_03370at 3547.206 kb on + strand, within MPMX20_03370at 3547.211 kb on + strand, within MPMX20_03370at 3547.256 kb on + strand, within MPMX20_03370at 3547.264 kb on - strand, within MPMX20_03370at 3547.290 kb on - strand, within MPMX20_03370at 3547.383 kb on + strand, within MPMX20_03370at 3547.443 kb on + strand, within MPMX20_03370at 3547.512 kb on + strand, within MPMX20_03370at 3547.520 kb on - strand, within MPMX20_03370at 3547.543 kb on + strand, within MPMX20_03370at 3547.610 kb on + strand, within MPMX20_03370at 3547.610 kb on + strand, within MPMX20_03370at 3547.705 kb on + strand, within MPMX20_03370at 3547.759 kb on + strand, within MPMX20_03370at 3548.086 kb on - strandat 3548.140 kb on + strand, within MPMX20_03371at 3548.188 kb on + strand, within MPMX20_03371at 3548.202 kb on + strand, within MPMX20_03371at 3548.248 kb on + strand, within MPMX20_03371at 3548.272 kb on - strand, within MPMX20_03371at 3548.338 kb on - strand, within MPMX20_03371at 3548.350 kb on - strand, within MPMX20_03371at 3548.409 kb on + strand, within MPMX20_03371at 3548.417 kb on - strand, within MPMX20_03371at 3548.417 kb on - strand, within MPMX20_03371at 3548.417 kb on - strand, within MPMX20_03371at 3548.460 kb on - strand, within MPMX20_03371at 3548.462 kb on + strand, within MPMX20_03371at 3548.462 kb on + strand, within MPMX20_03371at 3548.470 kb on - strand, within MPMX20_03371at 3548.474 kb on + strand, within MPMX20_03371at 3548.510 kb on + strand, within MPMX20_03371at 3548.510 kb on + strand, within MPMX20_03371at 3548.518 kb on - strand, within MPMX20_03371at 3548.518 kb on - strand, within MPMX20_03371at 3548.571 kb on + strand, within MPMX20_03371at 3548.575 kb on + strand, within MPMX20_03371at 3548.585 kb on + strand, within MPMX20_03371at 3548.595 kb on + strand, within MPMX20_03371at 3548.595 kb on + strand, within MPMX20_03371at 3548.603 kb on + strand, within MPMX20_03371at 3548.603 kb on - strand, within MPMX20_03371at 3548.603 kb on - strand, within MPMX20_03371at 3548.618 kb on + strand, within MPMX20_03371at 3548.626 kb on - strand, within MPMX20_03371at 3548.639 kb on + strand, within MPMX20_03371at 3548.639 kb on + strand, within MPMX20_03371at 3548.639 kb on + strand, within MPMX20_03371at 3548.639 kb on + strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.948 kb on + strand, within MPMX20_03371at 3548.948 kb on - strand, within MPMX20_03371at 3548.974 kb on + strand, within MPMX20_03371at 3548.993 kb on + strand, within MPMX20_03371at 3549.030 kb on - strand, within MPMX20_03371at 3549.064 kb on + strand, within MPMX20_03371at 3549.065 kb on - strand, within MPMX20_03371at 3549.087 kb on - strand, within MPMX20_03371at 3549.105 kb on + strand, within MPMX20_03371at 3549.159 kb on - strand, within MPMX20_03371at 3549.161 kb on + strand, within MPMX20_03371at 3549.161 kb on + strand, within MPMX20_03371at 3549.169 kb on - strand, within MPMX20_03371at 3549.169 kb on - strand, within MPMX20_03371at 3549.174 kb on - strand, within MPMX20_03371at 3549.334 kb on + strandat 3549.334 kb on + strandat 3549.342 kb on - strandat 3549.379 kb on + strandat 3549.407 kb on + strandat 3549.407 kb on + strandat 3549.407 kb on + strandat 3549.407 kb on + strandat 3549.425 kb on - strandat 3549.425 kb on - strandat 3549.471 kb on + strandat 3549.471 kb on + strandat 3549.479 kb on - strandat 3549.479 kb on - strandat 3549.479 kb on - strandat 3549.480 kb on - strandat 3549.487 kb on - strandat 3549.495 kb on + strandat 3549.495 kb on + strandat 3549.503 kb on - strandat 3549.507 kb on + strandat 3549.508 kb on - strandat 3549.598 kb on + strandat 3549.644 kb on - strand, within MPMX20_03372at 3549.784 kb on + strand, within MPMX20_03372at 3549.839 kb on + strand, within MPMX20_03372at 3549.840 kb on + strand, within MPMX20_03372at 3549.847 kb on - strand, within MPMX20_03372at 3549.896 kb on + strand, within MPMX20_03372at 3549.934 kb on + strand, within MPMX20_03372at 3549.956 kb on + strand, within MPMX20_03372at 3549.956 kb on + strand, within MPMX20_03372at 3549.984 kb on - strand, within MPMX20_03372at 3550.084 kb on + strand, within MPMX20_03372at 3550.139 kb on + strand, within MPMX20_03372at 3550.147 kb on - strand, within MPMX20_03372at 3550.211 kb on - strand, within MPMX20_03372at 3550.235 kb on - strand, within MPMX20_03372at 3550.284 kb on + strand, within MPMX20_03372at 3550.284 kb on + strand, within MPMX20_03372at 3550.287 kb on - strand, within MPMX20_03372at 3550.307 kb on + strand, within MPMX20_03372at 3550.307 kb on + strand, within MPMX20_03372at 3550.376 kb on + strandat 3550.481 kb on + strandat 3550.481 kb on + strandat 3550.481 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,546,984 - -0.8
3,546,991 - -0.8
3,547,007 - MPMX20_03370 0.11 -0.8
3,547,033 - MPMX20_03370 0.13 +0.2
3,547,057 - MPMX20_03370 0.16 -0.3
3,547,067 - MPMX20_03370 0.17 +0.6
3,547,069 - MPMX20_03370 0.17 -1.3
3,547,103 - MPMX20_03370 0.20 -1.4
3,547,116 + MPMX20_03370 0.21 +0.8
3,547,116 + MPMX20_03370 0.21 -1.6
3,547,116 + MPMX20_03370 0.21 -2.0
3,547,124 - MPMX20_03370 0.22 -0.8
3,547,124 - MPMX20_03370 0.22 +1.9
3,547,124 - MPMX20_03370 0.22 +1.0
3,547,140 + MPMX20_03370 0.24 +0.7
3,547,150 + MPMX20_03370 0.25 +0.0
3,547,150 + MPMX20_03370 0.25 -0.3
3,547,158 - MPMX20_03370 0.26 -1.5
3,547,158 - MPMX20_03370 0.26 -1.4
3,547,158 - MPMX20_03370 0.26 -0.4
3,547,206 + MPMX20_03370 0.30 +0.4
3,547,211 + MPMX20_03370 0.31 +2.0
3,547,256 + MPMX20_03370 0.35 -0.7
3,547,264 - MPMX20_03370 0.36 +0.1
3,547,290 - MPMX20_03370 0.38 +0.0
3,547,383 + MPMX20_03370 0.47 -0.5
3,547,443 + MPMX20_03370 0.53 -1.1
3,547,512 + MPMX20_03370 0.60 +1.0
3,547,520 - MPMX20_03370 0.61 -1.4
3,547,543 + MPMX20_03370 0.63 +0.9
3,547,610 + MPMX20_03370 0.69 +2.0
3,547,610 + MPMX20_03370 0.69 +0.4
3,547,705 + MPMX20_03370 0.79 -0.5
3,547,759 + MPMX20_03370 0.84 +2.6
3,548,086 - -0.9
3,548,140 + MPMX20_03371 0.13 -0.9
3,548,188 + MPMX20_03371 0.16 -0.4
3,548,202 + MPMX20_03371 0.17 +1.2
3,548,248 + MPMX20_03371 0.20 +0.3
3,548,272 - MPMX20_03371 0.22 +0.4
3,548,338 - MPMX20_03371 0.26 +0.7
3,548,350 - MPMX20_03371 0.27 -2.3
3,548,409 + MPMX20_03371 0.31 -0.6
3,548,417 - MPMX20_03371 0.31 -0.6
3,548,417 - MPMX20_03371 0.31 +1.2
3,548,417 - MPMX20_03371 0.31 -1.2
3,548,460 - MPMX20_03371 0.34 -2.0
3,548,462 + MPMX20_03371 0.34 +1.8
3,548,462 + MPMX20_03371 0.34 +0.5
3,548,470 - MPMX20_03371 0.35 +0.9
3,548,474 + MPMX20_03371 0.35 +0.7
3,548,510 + MPMX20_03371 0.37 -0.6
3,548,510 + MPMX20_03371 0.37 -1.3
3,548,518 - MPMX20_03371 0.38 +0.0
3,548,518 - MPMX20_03371 0.38 -1.6
3,548,571 + MPMX20_03371 0.41 -1.6
3,548,575 + MPMX20_03371 0.41 -1.2
3,548,585 + MPMX20_03371 0.42 +1.7
3,548,595 + MPMX20_03371 0.43 +0.7
3,548,595 + MPMX20_03371 0.43 +1.4
3,548,603 + MPMX20_03371 0.43 -0.3
3,548,603 - MPMX20_03371 0.43 -0.3
3,548,603 - MPMX20_03371 0.43 -0.4
3,548,618 + MPMX20_03371 0.44 -1.0
3,548,626 - MPMX20_03371 0.45 -1.0
3,548,639 + MPMX20_03371 0.45 +1.5
3,548,639 + MPMX20_03371 0.45 -0.3
3,548,639 + MPMX20_03371 0.45 +1.4
3,548,639 + MPMX20_03371 0.45 -1.4
3,548,647 - MPMX20_03371 0.46 +0.4
3,548,647 - MPMX20_03371 0.46 +1.0
3,548,647 - MPMX20_03371 0.46 +0.9
3,548,647 - MPMX20_03371 0.46 -1.6
3,548,647 - MPMX20_03371 0.46 +0.8
3,548,647 - MPMX20_03371 0.46 +1.4
3,548,647 - MPMX20_03371 0.46 +0.8
3,548,647 - MPMX20_03371 0.46 +2.9
3,548,948 + MPMX20_03371 0.65 -1.7
3,548,948 - MPMX20_03371 0.65 +0.1
3,548,974 + MPMX20_03371 0.67 -1.1
3,548,993 + MPMX20_03371 0.68 +1.4
3,549,030 - MPMX20_03371 0.71 +0.4
3,549,064 + MPMX20_03371 0.73 -1.7
3,549,065 - MPMX20_03371 0.73 +0.0
3,549,087 - MPMX20_03371 0.74 +0.0
3,549,105 + MPMX20_03371 0.76 +1.4
3,549,159 - MPMX20_03371 0.79 +0.4
3,549,161 + MPMX20_03371 0.79 -1.6
3,549,161 + MPMX20_03371 0.79 +1.8
3,549,169 - MPMX20_03371 0.80 +0.3
3,549,169 - MPMX20_03371 0.80 -2.1
3,549,174 - MPMX20_03371 0.80 +0.9
3,549,334 + -1.7
3,549,334 + -1.7
3,549,342 - -0.4
3,549,379 + -0.4
3,549,407 + -1.7
3,549,407 + -0.6
3,549,407 + +0.9
3,549,407 + -0.1
3,549,425 - +1.3
3,549,425 - -0.6
3,549,471 + +1.0
3,549,471 + +0.2
3,549,479 - -1.4
3,549,479 - -0.3
3,549,479 - -0.8
3,549,480 - -0.3
3,549,487 - -0.5
3,549,495 + +0.3
3,549,495 + -0.6
3,549,503 - +0.7
3,549,507 + +0.3
3,549,508 - +7.5
3,549,598 + +2.0
3,549,644 - MPMX20_03372 0.12 -0.8
3,549,784 + MPMX20_03372 0.27 +1.4
3,549,839 + MPMX20_03372 0.32 +1.0
3,549,840 + MPMX20_03372 0.33 -0.7
3,549,847 - MPMX20_03372 0.33 -1.0
3,549,896 + MPMX20_03372 0.39 +0.1
3,549,934 + MPMX20_03372 0.43 -1.2
3,549,956 + MPMX20_03372 0.45 -0.6
3,549,956 + MPMX20_03372 0.45 +1.4
3,549,984 - MPMX20_03372 0.48 -0.1
3,550,084 + MPMX20_03372 0.59 -1.1
3,550,139 + MPMX20_03372 0.65 -0.2
3,550,147 - MPMX20_03372 0.66 +0.1
3,550,211 - MPMX20_03372 0.72 +6.0
3,550,235 - MPMX20_03372 0.75 +2.2
3,550,284 + MPMX20_03372 0.80 -0.1
3,550,284 + MPMX20_03372 0.80 +1.4
3,550,287 - MPMX20_03372 0.81 -0.4
3,550,307 + MPMX20_03372 0.83 +0.3
3,550,307 + MPMX20_03372 0.83 -0.6
3,550,376 + +1.0
3,550,481 + -1.8
3,550,481 + -1.4
3,550,481 + -0.3

Or see this region's nucleotide sequence