Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02153

Experiment: TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02152 and MPMX20_02153 are separated by 138 nucleotidesMPMX20_02153 and MPMX20_02154 are separated by 9 nucleotidesMPMX20_02154 and MPMX20_02155 are separated by 94 nucleotides MPMX20_02152: MPMX20_02152 - Phenylacetate-coenzyme A ligase, at 2,244,081 to 2,245,397 _02152 MPMX20_02153: MPMX20_02153 - Transcriptional repressor PaaX, at 2,245,536 to 2,246,462 _02153 MPMX20_02154: MPMX20_02154 - Protein YrdA, at 2,246,472 to 2,247,068 _02154 MPMX20_02155: MPMX20_02155 - Coagulase/fibrinolysin, at 2,247,163 to 2,248,101 _02155 Position (kb) 2245 2246 2247Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2244.643 kb on + strand, within MPMX20_02152at 2244.674 kb on + strand, within MPMX20_02152at 2244.806 kb on + strand, within MPMX20_02152at 2244.947 kb on - strand, within MPMX20_02152at 2244.949 kb on - strand, within MPMX20_02152at 2244.956 kb on + strand, within MPMX20_02152at 2244.964 kb on - strand, within MPMX20_02152at 2244.999 kb on - strand, within MPMX20_02152at 2245.021 kb on - strand, within MPMX20_02152at 2245.021 kb on - strand, within MPMX20_02152at 2245.094 kb on + strand, within MPMX20_02152at 2245.139 kb on + strand, within MPMX20_02152at 2245.222 kb on + strand, within MPMX20_02152at 2245.230 kb on - strand, within MPMX20_02152at 2245.230 kb on - strand, within MPMX20_02152at 2245.230 kb on - strand, within MPMX20_02152at 2245.258 kb on + strand, within MPMX20_02152at 2245.258 kb on + strand, within MPMX20_02152at 2245.258 kb on + strand, within MPMX20_02152at 2245.266 kb on - strandat 2245.266 kb on - strandat 2245.266 kb on - strandat 2245.290 kb on + strandat 2245.354 kb on - strandat 2245.354 kb on - strandat 2245.408 kb on + strandat 2245.427 kb on + strandat 2245.470 kb on - strandat 2245.506 kb on - strandat 2245.552 kb on + strandat 2245.560 kb on - strandat 2245.560 kb on - strandat 2245.560 kb on - strandat 2245.578 kb on + strandat 2245.689 kb on - strand, within MPMX20_02153at 2245.713 kb on + strand, within MPMX20_02153at 2245.820 kb on + strand, within MPMX20_02153at 2245.841 kb on + strand, within MPMX20_02153at 2245.844 kb on + strand, within MPMX20_02153at 2246.097 kb on - strand, within MPMX20_02153at 2246.266 kb on - strand, within MPMX20_02153at 2246.283 kb on + strand, within MPMX20_02153at 2246.293 kb on - strand, within MPMX20_02153at 2246.306 kb on - strand, within MPMX20_02153at 2246.308 kb on + strand, within MPMX20_02153at 2246.322 kb on - strand, within MPMX20_02153at 2246.385 kb on + strandat 2246.393 kb on - strandat 2246.456 kb on + strandat 2246.464 kb on + strandat 2246.494 kb on + strandat 2246.527 kb on - strandat 2246.531 kb on + strandat 2246.554 kb on + strand, within MPMX20_02154at 2246.564 kb on + strand, within MPMX20_02154at 2246.567 kb on - strand, within MPMX20_02154at 2246.668 kb on + strand, within MPMX20_02154at 2246.676 kb on + strand, within MPMX20_02154at 2246.676 kb on - strand, within MPMX20_02154at 2246.681 kb on + strand, within MPMX20_02154at 2246.689 kb on - strand, within MPMX20_02154at 2246.724 kb on + strand, within MPMX20_02154at 2246.737 kb on + strand, within MPMX20_02154at 2246.737 kb on + strand, within MPMX20_02154at 2246.778 kb on + strand, within MPMX20_02154at 2246.786 kb on - strand, within MPMX20_02154at 2246.861 kb on + strand, within MPMX20_02154at 2246.903 kb on - strand, within MPMX20_02154at 2246.913 kb on - strand, within MPMX20_02154at 2246.916 kb on - strand, within MPMX20_02154at 2246.941 kb on - strand, within MPMX20_02154at 2246.941 kb on - strand, within MPMX20_02154at 2246.951 kb on + strand, within MPMX20_02154at 2246.965 kb on + strand, within MPMX20_02154at 2246.987 kb on + strand, within MPMX20_02154at 2247.014 kb on - strandat 2247.024 kb on + strandat 2247.095 kb on - strandat 2247.127 kb on + strandat 2247.127 kb on + strandat 2247.130 kb on - strandat 2247.132 kb on + strandat 2247.132 kb on + strandat 2247.132 kb on + strandat 2247.132 kb on + strandat 2247.135 kb on - strandat 2247.140 kb on - strandat 2247.140 kb on - strandat 2247.142 kb on + strandat 2247.150 kb on - strandat 2247.150 kb on - strandat 2247.172 kb on + strandat 2247.194 kb on + strandat 2247.194 kb on + strandat 2247.241 kb on + strandat 2247.241 kb on + strandat 2247.249 kb on - strandat 2247.278 kb on + strand, within MPMX20_02155at 2247.278 kb on + strand, within MPMX20_02155at 2247.278 kb on + strand, within MPMX20_02155at 2247.278 kb on + strand, within MPMX20_02155at 2247.278 kb on + strand, within MPMX20_02155at 2247.278 kb on + strand, within MPMX20_02155at 2247.285 kb on - strand, within MPMX20_02155at 2247.286 kb on - strand, within MPMX20_02155at 2247.286 kb on - strand, within MPMX20_02155at 2247.288 kb on + strand, within MPMX20_02155at 2247.298 kb on + strand, within MPMX20_02155at 2247.298 kb on + strand, within MPMX20_02155at 2247.298 kb on + strand, within MPMX20_02155at 2247.298 kb on + strand, within MPMX20_02155at 2247.304 kb on - strand, within MPMX20_02155at 2247.311 kb on - strand, within MPMX20_02155at 2247.340 kb on + strand, within MPMX20_02155at 2247.340 kb on + strand, within MPMX20_02155at 2247.345 kb on + strand, within MPMX20_02155at 2247.346 kb on - strand, within MPMX20_02155at 2247.348 kb on - strand, within MPMX20_02155at 2247.363 kb on + strand, within MPMX20_02155at 2247.363 kb on + strand, within MPMX20_02155at 2247.363 kb on + strand, within MPMX20_02155at 2247.363 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.365 kb on + strand, within MPMX20_02155at 2247.371 kb on - strand, within MPMX20_02155at 2247.373 kb on - strand, within MPMX20_02155at 2247.373 kb on - strand, within MPMX20_02155at 2247.373 kb on - strand, within MPMX20_02155at 2247.373 kb on - strand, within MPMX20_02155at 2247.373 kb on - strand, within MPMX20_02155at 2247.378 kb on + strand, within MPMX20_02155at 2247.378 kb on + strand, within MPMX20_02155at 2247.378 kb on + strand, within MPMX20_02155at 2247.378 kb on + strand, within MPMX20_02155at 2247.378 kb on + strand, within MPMX20_02155at 2247.378 kb on + strand, within MPMX20_02155at 2247.379 kb on + strand, within MPMX20_02155at 2247.386 kb on - strand, within MPMX20_02155at 2247.386 kb on - strand, within MPMX20_02155at 2247.386 kb on - strand, within MPMX20_02155at 2247.386 kb on - strand, within MPMX20_02155at 2247.387 kb on - strand, within MPMX20_02155at 2247.387 kb on - strand, within MPMX20_02155at 2247.395 kb on + strand, within MPMX20_02155at 2247.399 kb on + strand, within MPMX20_02155at 2247.399 kb on + strand, within MPMX20_02155at 2247.399 kb on + strand, within MPMX20_02155at 2247.399 kb on + strand, within MPMX20_02155at 2247.399 kb on + strand, within MPMX20_02155at 2247.399 kb on + strand, within MPMX20_02155at 2247.399 kb on + strand, within MPMX20_02155at 2247.399 kb on + strand, within MPMX20_02155at 2247.407 kb on - strand, within MPMX20_02155at 2247.408 kb on - strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.410 kb on + strand, within MPMX20_02155at 2247.413 kb on - strand, within MPMX20_02155at 2247.418 kb on - strand, within MPMX20_02155at 2247.418 kb on - strand, within MPMX20_02155at 2247.418 kb on - strand, within MPMX20_02155at 2247.418 kb on - strand, within MPMX20_02155at 2247.418 kb on - strand, within MPMX20_02155at 2247.418 kb on - strand, within MPMX20_02155at 2247.418 kb on - strand, within MPMX20_02155at 2247.418 kb on - strand, within MPMX20_02155at 2247.418 kb on - strand, within MPMX20_02155at 2247.425 kb on + strand, within MPMX20_02155at 2247.425 kb on + strand, within MPMX20_02155at 2247.425 kb on + strand, within MPMX20_02155at 2247.427 kb on + strand, within MPMX20_02155at 2247.427 kb on + strand, within MPMX20_02155at 2247.427 kb on + strand, within MPMX20_02155at 2247.427 kb on + strand, within MPMX20_02155at 2247.427 kb on + strand, within MPMX20_02155at 2247.427 kb on + strand, within MPMX20_02155at 2247.427 kb on + strand, within MPMX20_02155at 2247.427 kb on + strand, within MPMX20_02155at 2247.427 kb on + strand, within MPMX20_02155at 2247.432 kb on + strand, within MPMX20_02155at 2247.433 kb on - strand, within MPMX20_02155at 2247.435 kb on - strand, within MPMX20_02155at 2247.437 kb on + strand, within MPMX20_02155at 2247.437 kb on + strand, within MPMX20_02155at 2247.438 kb on + strand, within MPMX20_02155at 2247.438 kb on + strand, within MPMX20_02155at 2247.455 kb on + strand, within MPMX20_02155

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,244,643 + MPMX20_02152 0.43 +1.0
2,244,674 + MPMX20_02152 0.45 +0.9
2,244,806 + MPMX20_02152 0.55 -1.6
2,244,947 - MPMX20_02152 0.66 -2.0
2,244,949 - MPMX20_02152 0.66 -1.2
2,244,956 + MPMX20_02152 0.66 -0.0
2,244,964 - MPMX20_02152 0.67 -1.4
2,244,999 - MPMX20_02152 0.70 +0.1
2,245,021 - MPMX20_02152 0.71 -0.5
2,245,021 - MPMX20_02152 0.71 -0.5
2,245,094 + MPMX20_02152 0.77 +0.6
2,245,139 + MPMX20_02152 0.80 +1.8
2,245,222 + MPMX20_02152 0.87 -1.3
2,245,230 - MPMX20_02152 0.87 -0.8
2,245,230 - MPMX20_02152 0.87 -0.8
2,245,230 - MPMX20_02152 0.87 +0.3
2,245,258 + MPMX20_02152 0.89 -0.6
2,245,258 + MPMX20_02152 0.89 +1.0
2,245,258 + MPMX20_02152 0.89 +0.1
2,245,266 - +1.1
2,245,266 - +0.4
2,245,266 - -0.6
2,245,290 + -1.6
2,245,354 - -0.3
2,245,354 - +1.0
2,245,408 + +1.8
2,245,427 + +0.3
2,245,470 - -0.8
2,245,506 - -2.3
2,245,552 + -0.0
2,245,560 - -0.8
2,245,560 - -1.0
2,245,560 - +3.0
2,245,578 + +1.0
2,245,689 - MPMX20_02153 0.17 -0.5
2,245,713 + MPMX20_02153 0.19 -1.5
2,245,820 + MPMX20_02153 0.31 +0.7
2,245,841 + MPMX20_02153 0.33 +1.0
2,245,844 + MPMX20_02153 0.33 -0.7
2,246,097 - MPMX20_02153 0.61 -3.0
2,246,266 - MPMX20_02153 0.79 +2.0
2,246,283 + MPMX20_02153 0.81 -0.9
2,246,293 - MPMX20_02153 0.82 -1.9
2,246,306 - MPMX20_02153 0.83 -0.4
2,246,308 + MPMX20_02153 0.83 -0.3
2,246,322 - MPMX20_02153 0.85 -3.3
2,246,385 + +1.0
2,246,393 - +2.0
2,246,456 + -2.3
2,246,464 + -1.1
2,246,494 + +1.2
2,246,527 - -0.6
2,246,531 + -0.4
2,246,554 + MPMX20_02154 0.14 -0.6
2,246,564 + MPMX20_02154 0.15 -2.4
2,246,567 - MPMX20_02154 0.16 -0.3
2,246,668 + MPMX20_02154 0.33 -0.7
2,246,676 + MPMX20_02154 0.34 -0.5
2,246,676 - MPMX20_02154 0.34 -0.9
2,246,681 + MPMX20_02154 0.35 -0.0
2,246,689 - MPMX20_02154 0.36 -0.3
2,246,724 + MPMX20_02154 0.42 +0.6
2,246,737 + MPMX20_02154 0.44 -1.2
2,246,737 + MPMX20_02154 0.44 +0.2
2,246,778 + MPMX20_02154 0.51 -0.2
2,246,786 - MPMX20_02154 0.53 +1.0
2,246,861 + MPMX20_02154 0.65 -0.6
2,246,903 - MPMX20_02154 0.72 +0.1
2,246,913 - MPMX20_02154 0.74 -0.6
2,246,916 - MPMX20_02154 0.74 +1.4
2,246,941 - MPMX20_02154 0.79 +1.6
2,246,941 - MPMX20_02154 0.79 +1.3
2,246,951 + MPMX20_02154 0.80 -0.5
2,246,965 + MPMX20_02154 0.83 -0.6
2,246,987 + MPMX20_02154 0.86 -2.3
2,247,014 - -2.3
2,247,024 + -1.3
2,247,095 - -1.6
2,247,127 + -0.5
2,247,127 + +0.5
2,247,130 - -0.5
2,247,132 + -1.7
2,247,132 + +2.2
2,247,132 + -1.0
2,247,132 + +0.3
2,247,135 - -2.1
2,247,140 - +1.0
2,247,140 - +2.0
2,247,142 + -0.5
2,247,150 - -1.4
2,247,150 - -0.6
2,247,172 + +1.5
2,247,194 + +0.2
2,247,194 + -1.0
2,247,241 + -0.3
2,247,241 + -0.3
2,247,249 - -1.0
2,247,278 + MPMX20_02155 0.12 -1.0
2,247,278 + MPMX20_02155 0.12 -1.0
2,247,278 + MPMX20_02155 0.12 +0.2
2,247,278 + MPMX20_02155 0.12 -0.5
2,247,278 + MPMX20_02155 0.12 +0.5
2,247,278 + MPMX20_02155 0.12 +0.6
2,247,285 - MPMX20_02155 0.13 -0.4
2,247,286 - MPMX20_02155 0.13 +0.7
2,247,286 - MPMX20_02155 0.13 -0.6
2,247,288 + MPMX20_02155 0.13 -0.0
2,247,298 + MPMX20_02155 0.14 -0.3
2,247,298 + MPMX20_02155 0.14 -0.4
2,247,298 + MPMX20_02155 0.14 +0.0
2,247,298 + MPMX20_02155 0.14 -0.2
2,247,304 - MPMX20_02155 0.15 +0.8
2,247,311 - MPMX20_02155 0.16 -0.6
2,247,340 + MPMX20_02155 0.19 -0.4
2,247,340 + MPMX20_02155 0.19 +3.0
2,247,345 + MPMX20_02155 0.19 +2.3
2,247,346 - MPMX20_02155 0.19 -0.5
2,247,348 - MPMX20_02155 0.20 -0.6
2,247,363 + MPMX20_02155 0.21 +0.1
2,247,363 + MPMX20_02155 0.21 +1.0
2,247,363 + MPMX20_02155 0.21 -1.8
2,247,363 + MPMX20_02155 0.21 -0.8
2,247,365 + MPMX20_02155 0.22 -0.0
2,247,365 + MPMX20_02155 0.22 +0.3
2,247,365 + MPMX20_02155 0.22 -0.2
2,247,365 + MPMX20_02155 0.22 -0.0
2,247,365 + MPMX20_02155 0.22 +0.3
2,247,365 + MPMX20_02155 0.22 -0.3
2,247,365 + MPMX20_02155 0.22 -0.7
2,247,365 + MPMX20_02155 0.22 -0.4
2,247,365 + MPMX20_02155 0.22 -0.5
2,247,365 + MPMX20_02155 0.22 +0.1
2,247,365 + MPMX20_02155 0.22 -1.6
2,247,365 + MPMX20_02155 0.22 -0.8
2,247,365 + MPMX20_02155 0.22 -1.1
2,247,365 + MPMX20_02155 0.22 -0.4
2,247,371 - MPMX20_02155 0.22 -0.4
2,247,373 - MPMX20_02155 0.22 -0.7
2,247,373 - MPMX20_02155 0.22 +1.6
2,247,373 - MPMX20_02155 0.22 -0.8
2,247,373 - MPMX20_02155 0.22 +0.7
2,247,373 - MPMX20_02155 0.22 +1.1
2,247,378 + MPMX20_02155 0.23 -0.5
2,247,378 + MPMX20_02155 0.23 +0.3
2,247,378 + MPMX20_02155 0.23 -0.7
2,247,378 + MPMX20_02155 0.23 +3.6
2,247,378 + MPMX20_02155 0.23 -1.8
2,247,378 + MPMX20_02155 0.23 -0.8
2,247,379 + MPMX20_02155 0.23 -0.1
2,247,386 - MPMX20_02155 0.24 -0.1
2,247,386 - MPMX20_02155 0.24 -1.2
2,247,386 - MPMX20_02155 0.24 +1.7
2,247,386 - MPMX20_02155 0.24 -0.1
2,247,387 - MPMX20_02155 0.24 +0.6
2,247,387 - MPMX20_02155 0.24 -0.0
2,247,395 + MPMX20_02155 0.25 -1.6
2,247,399 + MPMX20_02155 0.25 +0.4
2,247,399 + MPMX20_02155 0.25 -0.8
2,247,399 + MPMX20_02155 0.25 -0.0
2,247,399 + MPMX20_02155 0.25 -0.6
2,247,399 + MPMX20_02155 0.25 -0.6
2,247,399 + MPMX20_02155 0.25 +1.5
2,247,399 + MPMX20_02155 0.25 +0.7
2,247,399 + MPMX20_02155 0.25 -0.9
2,247,407 - MPMX20_02155 0.26 -1.2
2,247,408 - MPMX20_02155 0.26 +2.0
2,247,410 + MPMX20_02155 0.26 +1.6
2,247,410 + MPMX20_02155 0.26 +1.0
2,247,410 + MPMX20_02155 0.26 -0.1
2,247,410 + MPMX20_02155 0.26 -0.0
2,247,410 + MPMX20_02155 0.26 -1.9
2,247,410 + MPMX20_02155 0.26 -0.5
2,247,410 + MPMX20_02155 0.26 -0.0
2,247,410 + MPMX20_02155 0.26 -0.4
2,247,410 + MPMX20_02155 0.26 +0.5
2,247,410 + MPMX20_02155 0.26 -0.3
2,247,410 + MPMX20_02155 0.26 +1.0
2,247,410 + MPMX20_02155 0.26 -2.9
2,247,410 + MPMX20_02155 0.26 -0.8
2,247,410 + MPMX20_02155 0.26 -2.1
2,247,410 + MPMX20_02155 0.26 -0.8
2,247,410 + MPMX20_02155 0.26 -0.2
2,247,410 + MPMX20_02155 0.26 -1.4
2,247,410 + MPMX20_02155 0.26 +1.0
2,247,413 - MPMX20_02155 0.27 +0.4
2,247,418 - MPMX20_02155 0.27 -0.0
2,247,418 - MPMX20_02155 0.27 -0.8
2,247,418 - MPMX20_02155 0.27 +0.4
2,247,418 - MPMX20_02155 0.27 -0.9
2,247,418 - MPMX20_02155 0.27 +3.0
2,247,418 - MPMX20_02155 0.27 -1.3
2,247,418 - MPMX20_02155 0.27 -2.0
2,247,418 - MPMX20_02155 0.27 +1.2
2,247,418 - MPMX20_02155 0.27 +1.0
2,247,425 + MPMX20_02155 0.28 -0.9
2,247,425 + MPMX20_02155 0.28 -2.0
2,247,425 + MPMX20_02155 0.28 -0.2
2,247,427 + MPMX20_02155 0.28 +0.6
2,247,427 + MPMX20_02155 0.28 -1.6
2,247,427 + MPMX20_02155 0.28 -0.2
2,247,427 + MPMX20_02155 0.28 +0.6
2,247,427 + MPMX20_02155 0.28 -1.3
2,247,427 + MPMX20_02155 0.28 +0.2
2,247,427 + MPMX20_02155 0.28 -0.2
2,247,427 + MPMX20_02155 0.28 +0.0
2,247,427 + MPMX20_02155 0.28 -1.0
2,247,432 + MPMX20_02155 0.29 +0.7
2,247,433 - MPMX20_02155 0.29 -1.4
2,247,435 - MPMX20_02155 0.29 +0.3
2,247,437 + MPMX20_02155 0.29 -1.8
2,247,437 + MPMX20_02155 0.29 +1.0
2,247,438 + MPMX20_02155 0.29 +0.1
2,247,438 + MPMX20_02155 0.29 -1.7
2,247,455 + MPMX20_02155 0.31 -1.3

Or see this region's nucleotide sequence