Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03147

Experiment: M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03146 and MPMX20_03147 are separated by 3 nucleotidesMPMX20_03147 and MPMX20_03148 are separated by 280 nucleotides MPMX20_03146: MPMX20_03146 - putative ABC transporter ATP-binding protein YejF, at 3,307,779 to 3,309,368 _03146 MPMX20_03147: MPMX20_03147 - putative protein YejG, at 3,309,372 to 3,309,716 _03147 MPMX20_03148: MPMX20_03148 - Bicyclomycin resistance protein, at 3,309,997 to 3,311,193 _03148 Position (kb) 3309 3310Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3308.403 kb on + strand, within MPMX20_03146at 3308.538 kb on - strand, within MPMX20_03146at 3308.538 kb on - strand, within MPMX20_03146at 3308.558 kb on + strand, within MPMX20_03146at 3308.735 kb on - strand, within MPMX20_03146at 3308.764 kb on + strand, within MPMX20_03146at 3308.766 kb on - strand, within MPMX20_03146at 3308.772 kb on + strand, within MPMX20_03146at 3308.772 kb on - strand, within MPMX20_03146at 3308.877 kb on + strand, within MPMX20_03146at 3308.913 kb on - strand, within MPMX20_03146at 3308.913 kb on - strand, within MPMX20_03146at 3308.920 kb on - strand, within MPMX20_03146at 3308.988 kb on + strand, within MPMX20_03146at 3309.046 kb on - strand, within MPMX20_03146at 3309.141 kb on + strand, within MPMX20_03146at 3309.141 kb on + strand, within MPMX20_03146at 3309.146 kb on + strand, within MPMX20_03146at 3309.154 kb on - strand, within MPMX20_03146at 3309.210 kb on + strandat 3309.218 kb on - strandat 3309.231 kb on + strandat 3309.256 kb on + strandat 3309.343 kb on - strandat 3309.358 kb on - strandat 3309.363 kb on + strandat 3309.366 kb on - strandat 3309.371 kb on - strandat 3309.494 kb on + strand, within MPMX20_03147at 3309.494 kb on + strand, within MPMX20_03147at 3309.502 kb on - strand, within MPMX20_03147at 3309.507 kb on - strand, within MPMX20_03147at 3309.519 kb on + strand, within MPMX20_03147at 3309.672 kb on + strand, within MPMX20_03147at 3309.701 kb on + strandat 3309.709 kb on - strandat 3309.772 kb on + strandat 3309.782 kb on + strandat 3309.785 kb on - strandat 3309.813 kb on + strandat 3309.819 kb on - strandat 3309.821 kb on - strandat 3309.834 kb on + strandat 3309.928 kb on + strandat 3309.943 kb on + strandat 3309.951 kb on - strandat 3309.977 kb on + strandat 3310.032 kb on - strandat 3310.032 kb on - strandat 3310.082 kb on + strandat 3310.343 kb on + strand, within MPMX20_03148at 3310.387 kb on + strand, within MPMX20_03148at 3310.405 kb on - strand, within MPMX20_03148at 3310.467 kb on + strand, within MPMX20_03148at 3310.467 kb on + strand, within MPMX20_03148at 3310.527 kb on - strand, within MPMX20_03148at 3310.544 kb on - strand, within MPMX20_03148at 3310.544 kb on - strand, within MPMX20_03148at 3310.544 kb on - strand, within MPMX20_03148at 3310.551 kb on - strand, within MPMX20_03148at 3310.592 kb on + strand, within MPMX20_03148at 3310.671 kb on - strand, within MPMX20_03148

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,308,403 + MPMX20_03146 0.39 -1.1
3,308,538 - MPMX20_03146 0.48 +0.3
3,308,538 - MPMX20_03146 0.48 -0.4
3,308,558 + MPMX20_03146 0.49 -0.5
3,308,735 - MPMX20_03146 0.60 -0.6
3,308,764 + MPMX20_03146 0.62 -2.2
3,308,766 - MPMX20_03146 0.62 +0.2
3,308,772 + MPMX20_03146 0.62 -0.6
3,308,772 - MPMX20_03146 0.62 -1.0
3,308,877 + MPMX20_03146 0.69 -2.4
3,308,913 - MPMX20_03146 0.71 -0.6
3,308,913 - MPMX20_03146 0.71 -0.8
3,308,920 - MPMX20_03146 0.72 -2.1
3,308,988 + MPMX20_03146 0.76 -1.2
3,309,046 - MPMX20_03146 0.80 -1.1
3,309,141 + MPMX20_03146 0.86 -2.2
3,309,141 + MPMX20_03146 0.86 -1.1
3,309,146 + MPMX20_03146 0.86 -1.6
3,309,154 - MPMX20_03146 0.86 -0.6
3,309,210 + -0.6
3,309,218 - +0.3
3,309,231 + -0.1
3,309,256 + -0.3
3,309,343 - -0.3
3,309,358 - -2.9
3,309,363 + -0.7
3,309,366 - -2.1
3,309,371 - +0.5
3,309,494 + MPMX20_03147 0.35 -1.9
3,309,494 + MPMX20_03147 0.35 +0.2
3,309,502 - MPMX20_03147 0.38 -1.7
3,309,507 - MPMX20_03147 0.39 -1.1
3,309,519 + MPMX20_03147 0.43 -2.9
3,309,672 + MPMX20_03147 0.87 -0.6
3,309,701 + -1.2
3,309,709 - -2.1
3,309,772 + -0.0
3,309,782 + +0.3
3,309,785 - -2.6
3,309,813 + -0.9
3,309,819 - -0.6
3,309,821 - -0.3
3,309,834 + +0.4
3,309,928 + -1.0
3,309,943 + -0.3
3,309,951 - +3.0
3,309,977 + -1.8
3,310,032 - -2.8
3,310,032 - -1.1
3,310,082 + +0.3
3,310,343 + MPMX20_03148 0.29 -0.6
3,310,387 + MPMX20_03148 0.33 -0.6
3,310,405 - MPMX20_03148 0.34 +1.0
3,310,467 + MPMX20_03148 0.39 +1.3
3,310,467 + MPMX20_03148 0.39 -0.1
3,310,527 - MPMX20_03148 0.44 -0.1
3,310,544 - MPMX20_03148 0.46 -0.2
3,310,544 - MPMX20_03148 0.46 -0.8
3,310,544 - MPMX20_03148 0.46 +0.4
3,310,551 - MPMX20_03148 0.46 -2.1
3,310,592 + MPMX20_03148 0.50 -1.5
3,310,671 - MPMX20_03148 0.56 -0.0

Or see this region's nucleotide sequence