Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02280

Experiment: M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02278 and MPMX20_02279 are separated by 143 nucleotidesMPMX20_02279 and MPMX20_02280 are separated by 145 nucleotidesMPMX20_02280 and MPMX20_02281 are separated by 44 nucleotidesMPMX20_02281 and MPMX20_02282 overlap by 4 nucleotides MPMX20_02278: MPMX20_02278 - hypothetical protein, at 2,389,709 to 2,390,257 _02278 MPMX20_02279: MPMX20_02279 - hypothetical protein, at 2,390,401 to 2,390,841 _02279 MPMX20_02280: MPMX20_02280 - Haloalkane dehalogenase, at 2,390,987 to 2,391,982 _02280 MPMX20_02281: MPMX20_02281 - Transcriptional regulatory protein OmpR, at 2,392,027 to 2,392,767 _02281 MPMX20_02282: MPMX20_02282 - Sensor histidine kinase RcsC, at 2,392,764 to 2,394,062 _02282 Position (kb) 2390 2391 2392Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 2389.992 kb on + strand, within MPMX20_02278at 2390.031 kb on + strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.097 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.134 kb on + strand, within MPMX20_02278at 2390.134 kb on - strand, within MPMX20_02278at 2390.134 kb on - strand, within MPMX20_02278at 2390.134 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.137 kb on - strand, within MPMX20_02278at 2390.142 kb on - strand, within MPMX20_02278at 2390.142 kb on - strand, within MPMX20_02278at 2390.142 kb on - strand, within MPMX20_02278at 2390.158 kb on + strand, within MPMX20_02278at 2390.172 kb on + strand, within MPMX20_02278at 2390.172 kb on + strand, within MPMX20_02278at 2390.172 kb on + strand, within MPMX20_02278at 2390.191 kb on + strand, within MPMX20_02278at 2390.202 kb on + strand, within MPMX20_02278at 2390.205 kb on - strandat 2390.207 kb on + strandat 2390.230 kb on + strandat 2390.272 kb on + strandat 2390.272 kb on + strandat 2390.272 kb on + strandat 2390.272 kb on + strandat 2390.280 kb on - strandat 2390.343 kb on - strandat 2390.353 kb on + strandat 2390.397 kb on + strandat 2390.397 kb on + strandat 2390.405 kb on - strandat 2390.405 kb on - strandat 2390.405 kb on - strandat 2390.419 kb on + strandat 2390.420 kb on - strandat 2390.427 kb on - strandat 2390.441 kb on - strandat 2390.473 kb on - strand, within MPMX20_02279at 2390.483 kb on + strand, within MPMX20_02279at 2390.527 kb on - strand, within MPMX20_02279at 2390.621 kb on + strand, within MPMX20_02279at 2390.627 kb on - strand, within MPMX20_02279at 2390.680 kb on + strand, within MPMX20_02279at 2390.763 kb on + strand, within MPMX20_02279at 2390.844 kb on + strandat 2390.869 kb on - strandat 2390.871 kb on + strandat 2390.890 kb on + strandat 2390.970 kb on + strandat 2391.106 kb on + strand, within MPMX20_02280at 2391.106 kb on + strand, within MPMX20_02280at 2391.106 kb on + strand, within MPMX20_02280at 2391.205 kb on - strand, within MPMX20_02280at 2391.222 kb on - strand, within MPMX20_02280at 2391.254 kb on + strand, within MPMX20_02280at 2391.319 kb on + strand, within MPMX20_02280at 2391.319 kb on + strand, within MPMX20_02280at 2391.327 kb on - strand, within MPMX20_02280at 2391.327 kb on - strand, within MPMX20_02280at 2391.328 kb on - strand, within MPMX20_02280at 2391.349 kb on + strand, within MPMX20_02280at 2391.357 kb on - strand, within MPMX20_02280at 2391.389 kb on + strand, within MPMX20_02280at 2391.462 kb on + strand, within MPMX20_02280at 2391.468 kb on + strand, within MPMX20_02280at 2391.476 kb on - strand, within MPMX20_02280at 2391.527 kb on + strand, within MPMX20_02280at 2391.577 kb on - strand, within MPMX20_02280at 2391.605 kb on + strand, within MPMX20_02280at 2391.615 kb on + strand, within MPMX20_02280at 2391.622 kb on + strand, within MPMX20_02280at 2391.630 kb on - strand, within MPMX20_02280at 2391.684 kb on + strand, within MPMX20_02280at 2391.684 kb on + strand, within MPMX20_02280at 2391.684 kb on + strand, within MPMX20_02280at 2391.701 kb on - strand, within MPMX20_02280at 2391.709 kb on + strand, within MPMX20_02280at 2391.731 kb on + strand, within MPMX20_02280at 2391.838 kb on + strand, within MPMX20_02280at 2391.851 kb on + strand, within MPMX20_02280at 2391.854 kb on - strand, within MPMX20_02280at 2391.856 kb on + strand, within MPMX20_02280at 2391.859 kb on - strand, within MPMX20_02280at 2391.859 kb on - strand, within MPMX20_02280at 2391.859 kb on - strand, within MPMX20_02280at 2391.864 kb on - strand, within MPMX20_02280at 2391.864 kb on - strand, within MPMX20_02280at 2391.914 kb on + strandat 2391.921 kb on + strandat 2392.083 kb on + strandat 2392.126 kb on - strand, within MPMX20_02281at 2392.214 kb on + strand, within MPMX20_02281at 2392.214 kb on + strand, within MPMX20_02281at 2392.214 kb on + strand, within MPMX20_02281at 2392.222 kb on - strand, within MPMX20_02281at 2392.226 kb on + strand, within MPMX20_02281at 2392.234 kb on - strand, within MPMX20_02281at 2392.241 kb on - strand, within MPMX20_02281at 2392.310 kb on - strand, within MPMX20_02281at 2392.317 kb on + strand, within MPMX20_02281at 2392.339 kb on - strand, within MPMX20_02281at 2392.367 kb on - strand, within MPMX20_02281at 2392.374 kb on + strand, within MPMX20_02281at 2392.521 kb on - strand, within MPMX20_02281at 2392.745 kb on + strandat 2392.753 kb on - strandat 2392.753 kb on - strandat 2392.758 kb on - strandat 2392.814 kb on + strandat 2392.822 kb on - strandat 2392.866 kb on + strandat 2392.874 kb on - strandat 2392.885 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,389,992 + MPMX20_02278 0.52 -1.1
2,390,031 + MPMX20_02278 0.59 -1.7
2,390,054 - MPMX20_02278 0.63 +0.5
2,390,054 - MPMX20_02278 0.63 -0.1
2,390,054 - MPMX20_02278 0.63 -0.7
2,390,054 - MPMX20_02278 0.63 +0.4
2,390,054 - MPMX20_02278 0.63 +3.1
2,390,097 + MPMX20_02278 0.71 -1.3
2,390,127 + MPMX20_02278 0.76 -1.6
2,390,127 + MPMX20_02278 0.76 +2.7
2,390,127 + MPMX20_02278 0.76 +0.8
2,390,127 + MPMX20_02278 0.76 +0.6
2,390,127 + MPMX20_02278 0.76 -2.5
2,390,127 + MPMX20_02278 0.76 -0.1
2,390,127 + MPMX20_02278 0.76 +1.0
2,390,127 + MPMX20_02278 0.76 +0.9
2,390,127 + MPMX20_02278 0.76 +0.3
2,390,127 + MPMX20_02278 0.76 +0.1
2,390,134 + MPMX20_02278 0.77 -0.8
2,390,134 - MPMX20_02278 0.77 -1.2
2,390,134 - MPMX20_02278 0.77 -0.2
2,390,134 - MPMX20_02278 0.77 -2.5
2,390,135 - MPMX20_02278 0.78 -0.0
2,390,135 - MPMX20_02278 0.78 +1.5
2,390,135 - MPMX20_02278 0.78 -1.4
2,390,135 - MPMX20_02278 0.78 +0.9
2,390,135 - MPMX20_02278 0.78 +1.5
2,390,135 - MPMX20_02278 0.78 +1.1
2,390,135 - MPMX20_02278 0.78 -1.9
2,390,135 - MPMX20_02278 0.78 -0.1
2,390,135 - MPMX20_02278 0.78 -1.0
2,390,135 - MPMX20_02278 0.78 -2.7
2,390,135 - MPMX20_02278 0.78 -0.7
2,390,135 - MPMX20_02278 0.78 +0.1
2,390,135 - MPMX20_02278 0.78 -0.9
2,390,135 - MPMX20_02278 0.78 -3.2
2,390,135 - MPMX20_02278 0.78 +0.4
2,390,135 - MPMX20_02278 0.78 -2.0
2,390,135 - MPMX20_02278 0.78 -0.4
2,390,135 - MPMX20_02278 0.78 +1.4
2,390,135 - MPMX20_02278 0.78 +1.8
2,390,135 - MPMX20_02278 0.78 -1.6
2,390,135 - MPMX20_02278 0.78 -0.3
2,390,135 - MPMX20_02278 0.78 -0.9
2,390,137 - MPMX20_02278 0.78 -1.3
2,390,142 - MPMX20_02278 0.79 -1.2
2,390,142 - MPMX20_02278 0.79 +2.3
2,390,142 - MPMX20_02278 0.79 -1.4
2,390,158 + MPMX20_02278 0.82 +0.4
2,390,172 + MPMX20_02278 0.84 +0.5
2,390,172 + MPMX20_02278 0.84 -1.9
2,390,172 + MPMX20_02278 0.84 -0.2
2,390,191 + MPMX20_02278 0.88 -1.4
2,390,202 + MPMX20_02278 0.90 -1.6
2,390,205 - +5.2
2,390,207 + +2.3
2,390,230 + +0.4
2,390,272 + -2.8
2,390,272 + +0.9
2,390,272 + -0.4
2,390,272 + +0.6
2,390,280 - +2.0
2,390,343 - +0.8
2,390,353 + -0.4
2,390,397 + +1.3
2,390,397 + +1.7
2,390,405 - -1.3
2,390,405 - -1.1
2,390,405 - +2.1
2,390,419 + +0.5
2,390,420 - -0.6
2,390,427 - -1.5
2,390,441 - -0.9
2,390,473 - MPMX20_02279 0.16 -0.8
2,390,483 + MPMX20_02279 0.19 -2.6
2,390,527 - MPMX20_02279 0.29 -1.3
2,390,621 + MPMX20_02279 0.50 +1.3
2,390,627 - MPMX20_02279 0.51 -2.3
2,390,680 + MPMX20_02279 0.63 -0.6
2,390,763 + MPMX20_02279 0.82 +2.4
2,390,844 + -1.1
2,390,869 - +2.3
2,390,871 + +1.4
2,390,890 + +0.9
2,390,970 + -0.3
2,391,106 + MPMX20_02280 0.12 +0.3
2,391,106 + MPMX20_02280 0.12 -0.0
2,391,106 + MPMX20_02280 0.12 +0.5
2,391,205 - MPMX20_02280 0.22 -2.2
2,391,222 - MPMX20_02280 0.24 +0.5
2,391,254 + MPMX20_02280 0.27 -0.1
2,391,319 + MPMX20_02280 0.33 -0.1
2,391,319 + MPMX20_02280 0.33 -2.0
2,391,327 - MPMX20_02280 0.34 -0.7
2,391,327 - MPMX20_02280 0.34 -1.8
2,391,328 - MPMX20_02280 0.34 -0.8
2,391,349 + MPMX20_02280 0.36 -1.4
2,391,357 - MPMX20_02280 0.37 -0.0
2,391,389 + MPMX20_02280 0.40 -0.2
2,391,462 + MPMX20_02280 0.48 -0.8
2,391,468 + MPMX20_02280 0.48 +1.9
2,391,476 - MPMX20_02280 0.49 -2.2
2,391,527 + MPMX20_02280 0.54 +0.3
2,391,577 - MPMX20_02280 0.59 -0.4
2,391,605 + MPMX20_02280 0.62 +0.1
2,391,615 + MPMX20_02280 0.63 -1.8
2,391,622 + MPMX20_02280 0.64 +0.3
2,391,630 - MPMX20_02280 0.65 -1.3
2,391,684 + MPMX20_02280 0.70 +1.7
2,391,684 + MPMX20_02280 0.70 -2.5
2,391,684 + MPMX20_02280 0.70 +0.5
2,391,701 - MPMX20_02280 0.72 -1.2
2,391,709 + MPMX20_02280 0.72 +0.9
2,391,731 + MPMX20_02280 0.75 -0.0
2,391,838 + MPMX20_02280 0.85 +0.1
2,391,851 + MPMX20_02280 0.87 +0.9
2,391,854 - MPMX20_02280 0.87 -2.4
2,391,856 + MPMX20_02280 0.87 -0.8
2,391,859 - MPMX20_02280 0.88 +0.0
2,391,859 - MPMX20_02280 0.88 -0.3
2,391,859 - MPMX20_02280 0.88 -0.6
2,391,864 - MPMX20_02280 0.88 -1.9
2,391,864 - MPMX20_02280 0.88 +1.3
2,391,914 + -1.1
2,391,921 + -3.1
2,392,083 + -1.5
2,392,126 - MPMX20_02281 0.13 -0.8
2,392,214 + MPMX20_02281 0.25 -0.6
2,392,214 + MPMX20_02281 0.25 +3.9
2,392,214 + MPMX20_02281 0.25 +1.1
2,392,222 - MPMX20_02281 0.26 -0.2
2,392,226 + MPMX20_02281 0.27 +0.8
2,392,234 - MPMX20_02281 0.28 -0.9
2,392,241 - MPMX20_02281 0.29 +4.9
2,392,310 - MPMX20_02281 0.38 -1.3
2,392,317 + MPMX20_02281 0.39 +0.1
2,392,339 - MPMX20_02281 0.42 +1.4
2,392,367 - MPMX20_02281 0.46 -2.4
2,392,374 + MPMX20_02281 0.47 -0.9
2,392,521 - MPMX20_02281 0.67 -1.6
2,392,745 + -2.3
2,392,753 - +1.3
2,392,753 - -1.1
2,392,758 - -0.7
2,392,814 + -1.3
2,392,822 - +0.6
2,392,866 + -3.7
2,392,874 - +0.6
2,392,885 + +1.1

Or see this region's nucleotide sequence