Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01539

Experiment: M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01538 and MPMX20_01539 overlap by 4 nucleotidesMPMX20_01539 and MPMX20_01540 are separated by 159 nucleotides MPMX20_01538: MPMX20_01538 - hypothetical protein, at 1,608,616 to 1,610,274 _01538 MPMX20_01539: MPMX20_01539 - hypothetical protein, at 1,610,271 to 1,611,227 _01539 MPMX20_01540: MPMX20_01540 - Macrolide export protein MacA, at 1,611,387 to 1,612,502 _01540 Position (kb) 1610 1611 1612Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 1609.289 kb on + strand, within MPMX20_01538at 1609.292 kb on - strand, within MPMX20_01538at 1609.292 kb on - strand, within MPMX20_01538at 1609.297 kb on - strand, within MPMX20_01538at 1609.333 kb on + strand, within MPMX20_01538at 1609.333 kb on + strand, within MPMX20_01538at 1609.382 kb on + strand, within MPMX20_01538at 1609.382 kb on + strand, within MPMX20_01538at 1609.443 kb on + strand, within MPMX20_01538at 1609.448 kb on - strand, within MPMX20_01538at 1609.524 kb on + strand, within MPMX20_01538at 1609.524 kb on + strand, within MPMX20_01538at 1609.566 kb on - strand, within MPMX20_01538at 1609.585 kb on - strand, within MPMX20_01538at 1609.620 kb on - strand, within MPMX20_01538at 1609.664 kb on + strand, within MPMX20_01538at 1609.749 kb on - strand, within MPMX20_01538at 1609.838 kb on + strand, within MPMX20_01538at 1609.838 kb on + strand, within MPMX20_01538at 1609.964 kb on + strand, within MPMX20_01538at 1610.269 kb on + strandat 1610.287 kb on + strandat 1610.296 kb on - strandat 1610.372 kb on + strand, within MPMX20_01539at 1610.438 kb on + strand, within MPMX20_01539at 1610.446 kb on - strand, within MPMX20_01539at 1610.515 kb on + strand, within MPMX20_01539at 1610.515 kb on + strand, within MPMX20_01539at 1610.523 kb on - strand, within MPMX20_01539at 1610.523 kb on - strand, within MPMX20_01539at 1610.623 kb on + strand, within MPMX20_01539at 1610.631 kb on - strand, within MPMX20_01539at 1610.679 kb on - strand, within MPMX20_01539at 1610.716 kb on - strand, within MPMX20_01539at 1610.716 kb on - strand, within MPMX20_01539at 1610.716 kb on - strand, within MPMX20_01539at 1610.716 kb on - strand, within MPMX20_01539at 1610.737 kb on + strand, within MPMX20_01539at 1610.794 kb on + strand, within MPMX20_01539at 1610.801 kb on + strand, within MPMX20_01539at 1610.802 kb on - strand, within MPMX20_01539at 1610.807 kb on + strand, within MPMX20_01539at 1610.846 kb on + strand, within MPMX20_01539at 1610.846 kb on + strand, within MPMX20_01539at 1610.872 kb on + strand, within MPMX20_01539at 1610.872 kb on + strand, within MPMX20_01539at 1610.874 kb on - strand, within MPMX20_01539at 1610.880 kb on - strand, within MPMX20_01539at 1610.880 kb on - strand, within MPMX20_01539at 1610.880 kb on - strand, within MPMX20_01539at 1610.880 kb on - strand, within MPMX20_01539at 1610.895 kb on - strand, within MPMX20_01539at 1611.063 kb on + strand, within MPMX20_01539at 1611.069 kb on - strand, within MPMX20_01539at 1611.070 kb on + strand, within MPMX20_01539at 1611.126 kb on - strand, within MPMX20_01539at 1611.157 kb on + strandat 1611.158 kb on - strandat 1611.165 kb on - strandat 1611.184 kb on + strandat 1611.186 kb on - strandat 1611.186 kb on - strandat 1611.227 kb on + strandat 1611.392 kb on + strandat 1611.392 kb on + strandat 1611.451 kb on + strandat 1611.457 kb on + strandat 1611.457 kb on + strandat 1611.459 kb on - strandat 1611.460 kb on - strandat 1611.460 kb on - strandat 1611.478 kb on + strandat 1611.481 kb on + strandat 1611.486 kb on - strandat 1611.491 kb on - strandat 1611.491 kb on - strandat 1611.491 kb on - strandat 1611.493 kb on + strandat 1611.501 kb on + strand, within MPMX20_01540at 1611.563 kb on + strand, within MPMX20_01540at 1611.563 kb on + strand, within MPMX20_01540at 1611.571 kb on - strand, within MPMX20_01540at 1611.571 kb on - strand, within MPMX20_01540at 1611.576 kb on - strand, within MPMX20_01540at 1611.587 kb on + strand, within MPMX20_01540at 1611.587 kb on + strand, within MPMX20_01540at 1611.587 kb on + strand, within MPMX20_01540at 1611.595 kb on - strand, within MPMX20_01540at 1611.607 kb on - strand, within MPMX20_01540at 1611.664 kb on + strand, within MPMX20_01540at 1611.689 kb on - strand, within MPMX20_01540at 1611.737 kb on + strand, within MPMX20_01540at 1611.751 kb on - strand, within MPMX20_01540at 1611.762 kb on - strand, within MPMX20_01540at 1611.772 kb on - strand, within MPMX20_01540at 1611.786 kb on + strand, within MPMX20_01540at 1611.803 kb on + strand, within MPMX20_01540at 1611.819 kb on + strand, within MPMX20_01540at 1611.892 kb on - strand, within MPMX20_01540at 1611.893 kb on + strand, within MPMX20_01540at 1611.948 kb on - strand, within MPMX20_01540at 1611.992 kb on - strand, within MPMX20_01540at 1612.043 kb on + strand, within MPMX20_01540at 1612.058 kb on + strand, within MPMX20_01540at 1612.070 kb on + strand, within MPMX20_01540at 1612.113 kb on + strand, within MPMX20_01540at 1612.145 kb on - strand, within MPMX20_01540at 1612.156 kb on - strand, within MPMX20_01540at 1612.205 kb on + strand, within MPMX20_01540at 1612.213 kb on - strand, within MPMX20_01540

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,609,289 + MPMX20_01538 0.41 -0.0
1,609,292 - MPMX20_01538 0.41 -0.8
1,609,292 - MPMX20_01538 0.41 +2.2
1,609,297 - MPMX20_01538 0.41 +0.0
1,609,333 + MPMX20_01538 0.43 +0.1
1,609,333 + MPMX20_01538 0.43 +0.5
1,609,382 + MPMX20_01538 0.46 -1.8
1,609,382 + MPMX20_01538 0.46 -0.1
1,609,443 + MPMX20_01538 0.50 -0.9
1,609,448 - MPMX20_01538 0.50 -0.1
1,609,524 + MPMX20_01538 0.55 -0.5
1,609,524 + MPMX20_01538 0.55 -1.1
1,609,566 - MPMX20_01538 0.57 -2.8
1,609,585 - MPMX20_01538 0.58 -0.1
1,609,620 - MPMX20_01538 0.61 +0.9
1,609,664 + MPMX20_01538 0.63 -0.6
1,609,749 - MPMX20_01538 0.68 -1.9
1,609,838 + MPMX20_01538 0.74 +0.9
1,609,838 + MPMX20_01538 0.74 -1.2
1,609,964 + MPMX20_01538 0.81 +0.2
1,610,269 + +0.8
1,610,287 + -0.4
1,610,296 - +0.7
1,610,372 + MPMX20_01539 0.11 -0.9
1,610,438 + MPMX20_01539 0.17 -1.5
1,610,446 - MPMX20_01539 0.18 +2.2
1,610,515 + MPMX20_01539 0.25 +0.0
1,610,515 + MPMX20_01539 0.25 -0.6
1,610,523 - MPMX20_01539 0.26 -0.5
1,610,523 - MPMX20_01539 0.26 -1.5
1,610,623 + MPMX20_01539 0.37 +2.7
1,610,631 - MPMX20_01539 0.38 +1.2
1,610,679 - MPMX20_01539 0.43 +0.0
1,610,716 - MPMX20_01539 0.46 +2.2
1,610,716 - MPMX20_01539 0.46 -0.4
1,610,716 - MPMX20_01539 0.46 -0.6
1,610,716 - MPMX20_01539 0.46 +0.2
1,610,737 + MPMX20_01539 0.49 -1.0
1,610,794 + MPMX20_01539 0.55 +0.9
1,610,801 + MPMX20_01539 0.55 -0.5
1,610,802 - MPMX20_01539 0.55 -0.6
1,610,807 + MPMX20_01539 0.56 +1.4
1,610,846 + MPMX20_01539 0.60 +5.6
1,610,846 + MPMX20_01539 0.60 -1.3
1,610,872 + MPMX20_01539 0.63 +0.8
1,610,872 + MPMX20_01539 0.63 +1.1
1,610,874 - MPMX20_01539 0.63 -0.8
1,610,880 - MPMX20_01539 0.64 +0.6
1,610,880 - MPMX20_01539 0.64 -0.4
1,610,880 - MPMX20_01539 0.64 +0.7
1,610,880 - MPMX20_01539 0.64 +0.1
1,610,895 - MPMX20_01539 0.65 +4.6
1,611,063 + MPMX20_01539 0.83 +1.2
1,611,069 - MPMX20_01539 0.83 -0.9
1,611,070 + MPMX20_01539 0.83 -1.9
1,611,126 - MPMX20_01539 0.89 +0.9
1,611,157 + -2.3
1,611,158 - -2.9
1,611,165 - -0.1
1,611,184 + -0.1
1,611,186 - +0.2
1,611,186 - +1.2
1,611,227 + -0.7
1,611,392 + -1.9
1,611,392 + -1.9
1,611,451 + -0.6
1,611,457 + -1.5
1,611,457 + -1.6
1,611,459 - +0.4
1,611,460 - -0.3
1,611,460 - +2.2
1,611,478 + +1.7
1,611,481 + +0.9
1,611,486 - +0.9
1,611,491 - -1.9
1,611,491 - -1.4
1,611,491 - -3.7
1,611,493 + +0.0
1,611,501 + MPMX20_01540 0.10 -0.0
1,611,563 + MPMX20_01540 0.16 +1.8
1,611,563 + MPMX20_01540 0.16 -0.3
1,611,571 - MPMX20_01540 0.16 -0.5
1,611,571 - MPMX20_01540 0.16 -0.8
1,611,576 - MPMX20_01540 0.17 +0.9
1,611,587 + MPMX20_01540 0.18 +0.0
1,611,587 + MPMX20_01540 0.18 +1.3
1,611,587 + MPMX20_01540 0.18 -0.6
1,611,595 - MPMX20_01540 0.19 +6.0
1,611,607 - MPMX20_01540 0.20 -0.2
1,611,664 + MPMX20_01540 0.25 +2.7
1,611,689 - MPMX20_01540 0.27 -0.2
1,611,737 + MPMX20_01540 0.31 -0.8
1,611,751 - MPMX20_01540 0.33 +0.9
1,611,762 - MPMX20_01540 0.34 +1.1
1,611,772 - MPMX20_01540 0.34 -1.3
1,611,786 + MPMX20_01540 0.36 +0.5
1,611,803 + MPMX20_01540 0.37 -0.3
1,611,819 + MPMX20_01540 0.39 +0.6
1,611,892 - MPMX20_01540 0.45 +1.5
1,611,893 + MPMX20_01540 0.45 -0.2
1,611,948 - MPMX20_01540 0.50 -2.4
1,611,992 - MPMX20_01540 0.54 +0.3
1,612,043 + MPMX20_01540 0.59 -0.3
1,612,058 + MPMX20_01540 0.60 +2.4
1,612,070 + MPMX20_01540 0.61 -1.8
1,612,113 + MPMX20_01540 0.65 +0.1
1,612,145 - MPMX20_01540 0.68 -0.5
1,612,156 - MPMX20_01540 0.69 -0.6
1,612,205 + MPMX20_01540 0.73 +0.2
1,612,213 - MPMX20_01540 0.74 -0.6

Or see this region's nucleotide sequence